RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
CSPG4P12-201ENST00000558282 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
CSPG4P12-201ENST00000558282 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
CSPG4P12-201ENST00000558282 PNNQ9H307 717 aaKnown RBP15.42■□□□□ 0.06
CSPG4P12-201ENST00000558282 RSPH6AQ9H0K4 717 aa15.41■□□□□ 0.06
CSPG4P12-201ENST00000558282 MSNP26038 577 aaKnown RBP15.4■□□□□ 0.06
CSPG4P12-201ENST00000558282 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
CSPG4P12-201ENST00000558282 WDR43Q15061 677 aaKnown RBP eCLIP15.38■□□□□ 0.05
CSPG4P12-201ENST00000558282 CHAF1AQ13111 956 aaPredicted RBP15.38■□□□□ 0.05
CSPG4P12-201ENST00000558282 SALL2Q9Y467 1007 aaPredicted RBP15.37■□□□□ 0.05
CSPG4P12-201ENST00000558282 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.36■□□□□ 0.05
CSPG4P12-201ENST00000558282 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
CSPG4P12-201ENST00000558282 EIF4G2P78344 907 aaKnown RBP eCLIP15.32■□□□□ 0.04
CSPG4P12-201ENST00000558282 HSP90AA2PQ14568 343 aaPredicted RBP15.31■□□□□ 0.04
CSPG4P12-201ENST00000558282 USP35Q9P2H5 1018 aa15.31■□□□□ 0.04
CSPG4P12-201ENST00000558282 PTMSP20962 102 aa15.29■□□□□ 0.04
CSPG4P12-201ENST00000558282 SLC24A1O60721 1099 aa15.27■□□□□ 0.04
CSPG4P12-201ENST00000558282 NRDCO43847 1150 aa15.27■□□□□ 0.04
CSPG4P12-201ENST00000558282 GOLGA6L6A8MZA4 724 aa15.27■□□□□ 0.03
CSPG4P12-201ENST00000558282 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
CSPG4P12-201ENST00000558282 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
CSPG4P12-201ENST00000558282 VSIG10Q8N0Z9 540 aa15.25■□□□□ 0.03
CSPG4P12-201ENST00000558282 TNNT3P45378 269 aaPredicted RBP15.23■□□□□ 0.03
CSPG4P12-201ENST00000558282 B4GALNT3Q6L9W6 998 aa15.23■□□□□ 0.03
CSPG4P12-201ENST00000558282 IPO9Q96P70 1041 aaKnown RBP15.22■□□□□ 0.03
CSPG4P12-201ENST00000558282 CASC1Q6TDU7 716 aa15.22■□□□□ 0.03
CSPG4P12-201ENST00000558282 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
CSPG4P12-201ENST00000558282 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
CSPG4P12-201ENST00000558282 HSCBQ8IWL3 235 aa15.18■□□□□ 0.02
CSPG4P12-201ENST00000558282 AMER1Q5JTC6 1135 aaPredicted RBP15.17■□□□□ 0.02
CSPG4P12-201ENST00000558282 KIAA2012Q0VF49 1180 aa15.16■□□□□ 0.02
CSPG4P12-201ENST00000558282 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
CSPG4P12-201ENST00000558282 EEA1Q15075 1411 aa15.15■□□□□ 0.02
CSPG4P12-201ENST00000558282 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
CSPG4P12-201ENST00000558282 RGS3P49796 1198 aa15.14■□□□□ 0.01
CSPG4P12-201ENST00000558282 GBP4Q96PP9 640 aa15.14■□□□□ 0.01
CSPG4P12-201ENST00000558282 ARID4BQ4LE39 1312 aaPredicted RBP15.13■□□□□ 0.01
CSPG4P12-201ENST00000558282 FANCIQ9NVI1 1328 aa15.13■□□□□ 0.01
CSPG4P12-201ENST00000558282 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
CSPG4P12-201ENST00000558282 PLCB2Q00722 1185 aa15.13■□□□□ 0.01
CSPG4P12-201ENST00000558282 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
CSPG4P12-201ENST00000558282 CHMP4BQ9H444 224 aaKnown RBP15.11■□□□□ 0.01
CSPG4P12-201ENST00000558282 MS4A1P11836 297 aa15.1■□□□□ 0.01
CSPG4P12-201ENST00000558282 CFAP44Q96MT7 982 aa15.1■□□□□ 0.01
CSPG4P12-201ENST00000558282 TIMELESSQ9UNS1 1208 aa15.09■□□□□ 0.01
CSPG4P12-201ENST00000558282 PRKCSHP14314 528 aaPredicted RBP15.08■□□□□ 0
CSPG4P12-201ENST00000558282 PKNOX2Q96KN3 472 aa15.06■□□□□ 0
CSPG4P12-201ENST00000558282 GSE1Q14687 1217 aa15.06■□□□□ 0
CSPG4P12-201ENST00000558282 FTSJ3Q8IY81 847 aaKnown RBP15.05■□□□□ 0
CSPG4P12-201ENST00000558282 P3H3Q8IVL6 736 aa15.04■□□□□ -0
CSPG4P12-201ENST00000558282 CLIP1P30622 1438 aa15.01□□□□□ -0.01
CSPG4P12-201ENST00000558282 SYAP1Q96A49 352 aaPredicted RBP15□□□□□ -0.01
CSPG4P12-201ENST00000558282 ZNF777Q9ULD5 760 aaPredicted RBP14.99□□□□□ -0.01
CSPG4P12-201ENST00000558282 GOLGA6L4A6NEF3 574 aa14.99□□□□□ -0.01
CSPG4P12-201ENST00000558282 CDCA8Q53HL2 280 aa14.98□□□□□ -0.01
CSPG4P12-201ENST00000558282 DRC7Q8IY82 874 aa14.98□□□□□ -0.01
CSPG4P12-201ENST00000558282 CFAP53Q96M91 514 aa14.97□□□□□ -0.01
CSPG4P12-201ENST00000558282 ARID3AQ99856 593 aa14.96□□□□□ -0.01
CSPG4P12-201ENST00000558282 GZF1Q9H116 711 aaPredicted RBP14.96□□□□□ -0.02
CSPG4P12-201ENST00000558282 CEP162Q5TB80 1403 aa14.95□□□□□ -0.02
CSPG4P12-201ENST00000558282 MAP7D2Q96T17 732 aa14.95□□□□□ -0.02
CSPG4P12-201ENST00000558282 MTERF4Q7Z6M4 381 aaKnown RBP14.93□□□□□ -0.02
CSPG4P12-201ENST00000558282 DDX11L8A8MPP1 907 aa14.93□□□□□ -0.02
CSPG4P12-201ENST00000558282 KNSTRNQ9Y448 316 aa14.93□□□□□ -0.02
CSPG4P12-201ENST00000558282 PODXL2Q9NZ53 605 aa14.92□□□□□ -0.02
CSPG4P12-201ENST00000558282 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
CSPG4P12-201ENST00000558282 MCCP23508 829 aa14.92□□□□□ -0.02
CSPG4P12-201ENST00000558282 GOLGA6L1Q8N7Z2 621 aa14.92□□□□□ -0.02
CSPG4P12-201ENST00000558282 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
CSPG4P12-201ENST00000558282 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
CSPG4P12-201ENST00000558282 SETQ01105 290 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P12-201ENST00000558282 TPRNQ4KMQ1 711 aa14.89□□□□□ -0.03
CSPG4P12-201ENST00000558282 CALD1Q05682 793 aaKnown RBP14.89□□□□□ -0.03
CSPG4P12-201ENST00000558282 MTUS2Q5JR59 1369 aa14.89□□□□□ -0.03
CSPG4P12-201ENST00000558282 SKOR2Q2VWA4 1001 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P12-201ENST00000558282 GOLGA3Q08378 1498 aa14.88□□□□□ -0.03
CSPG4P12-201ENST00000558282 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P12-201ENST00000558282 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
CSPG4P12-201ENST00000558282 CSPP1Q1MSJ5 1256 aa14.87□□□□□ -0.03
CSPG4P12-201ENST00000558282 SPRYD3Q8NCJ5 442 aa14.87□□□□□ -0.03
CSPG4P12-201ENST00000558282 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
CSPG4P12-201ENST00000558282 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.87□□□□□ -0.03
CSPG4P12-201ENST00000558282 RCAN3Q9UKA8 241 aa14.86□□□□□ -0.03
CSPG4P12-201ENST00000558282 ZNF771Q7L3S4 317 aaPredicted RBP14.86□□□□□ -0.03
CSPG4P12-201ENST00000558282 PHF14O94880 888 aa14.86□□□□□ -0.03
CSPG4P12-201ENST00000558282 NUDCQ9Y266 331 aa14.84□□□□□ -0.03
CSPG4P12-201ENST00000558282 TSPY4P0CV99 314 aa14.83□□□□□ -0.03
CSPG4P12-201ENST00000558282 TSPY10P0CW01 314 aa14.83□□□□□ -0.03
CSPG4P12-201ENST00000558282 HTATSF1O43719 755 aaKnown RBP14.83□□□□□ -0.04
CSPG4P12-201ENST00000558282 ANO8Q9HCE9 1232 aaPredicted RBP14.83□□□□□ -0.04
CSPG4P12-201ENST00000558282 RWDD1Q9H446 243 aaPredicted RBP14.82□□□□□ -0.04
CSPG4P12-201ENST00000558282 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
CSPG4P12-201ENST00000558282 TPM2P07951 284 aa14.81□□□□□ -0.04
CSPG4P12-201ENST00000558282 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
CSPG4P12-201ENST00000558282 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
CSPG4P12-201ENST00000558282 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
CSPG4P12-201ENST00000558282 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
CSPG4P12-201ENST00000558282 A0A0U1RQG5 324 aaPredicted RBP14.8□□□□□ -0.04
CSPG4P12-201ENST00000558282 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
CSPG4P12-201ENST00000558282 CALRP27797 417 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms