RNA–Protein interactions for RNA: ENST00000557887.1

LINC00933-201, long intergenic non-protein coding RNA 933, humanhuman

TSL 2 BASIC

Gene LINC00933, Length 2,606 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00933-201ENST00000557887 SMARCA4P51532 1647 aa13.48□□□□□ -0.25
LINC00933-201ENST00000557887 WASHC2CQ9Y4E1 1318 aa13.46□□□□□ -0.25
LINC00933-201ENST00000557887 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
LINC00933-201ENST00000557887 RANGAP1P46060 587 aaPredicted RBP13.43□□□□□ -0.26
LINC00933-201ENST00000557887 BRPF3Q9ULD4 1205 aa13.43□□□□□ -0.26
LINC00933-201ENST00000557887 GOLGA3Q08378 1498 aa13.42□□□□□ -0.26
LINC00933-201ENST00000557887 EEA1Q15075 1411 aa13.4□□□□□ -0.26
LINC00933-201ENST00000557887 IPO9Q96P70 1041 aaKnown RBP13.38□□□□□ -0.27
LINC00933-201ENST00000557887 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
LINC00933-201ENST00000557887 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00933-201ENST00000557887 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
LINC00933-201ENST00000557887 A0A0U1RQG5 324 aaPredicted RBP13.35□□□□□ -0.27
LINC00933-201ENST00000557887 FGD1P98174 961 aa13.35□□□□□ -0.27
LINC00933-201ENST00000557887 USP35Q9P2H5 1018 aa13.35□□□□□ -0.27
LINC00933-201ENST00000557887 PDE4CQ08493 712 aa13.34□□□□□ -0.27
LINC00933-201ENST00000557887 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
LINC00933-201ENST00000557887 CLIP1P30622 1438 aa13.33□□□□□ -0.28
LINC00933-201ENST00000557887 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
LINC00933-201ENST00000557887 PPP4R2Q9NY27 417 aa13.33□□□□□ -0.28
LINC00933-201ENST00000557887 ANP32AP39687 249 aaKnown RBP13.32□□□□□ -0.28
LINC00933-201ENST00000557887 RBM10P98175 930 aaKnown RBP13.32□□□□□ -0.28
LINC00933-201ENST00000557887 AAMPQ13685 434 aa13.32□□□□□ -0.28
LINC00933-201ENST00000557887 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
LINC00933-201ENST00000557887 NEFMP07197 916 aa13.31□□□□□ -0.28
LINC00933-201ENST00000557887 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
LINC00933-201ENST00000557887 SYNJ1O43426 1573 aa13.29□□□□□ -0.28
LINC00933-201ENST00000557887 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
LINC00933-201ENST00000557887 VPS8Q8N3P4 1428 aa13.26□□□□□ -0.29
LINC00933-201ENST00000557887 CCER2I3L3R5 266 aa13.26□□□□□ -0.29
LINC00933-201ENST00000557887 RAPGEF2Q9Y4G8 1499 aa13.25□□□□□ -0.29
LINC00933-201ENST00000557887 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
LINC00933-201ENST00000557887 KIF21BO75037 1637 aa13.23□□□□□ -0.29
LINC00933-201ENST00000557887 GSE1Q14687 1217 aa13.23□□□□□ -0.29
LINC00933-201ENST00000557887 B4GALNT3Q6L9W6 998 aa13.21□□□□□ -0.29
LINC00933-201ENST00000557887 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.3
LINC00933-201ENST00000557887 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.3
LINC00933-201ENST00000557887 RRP9O43818 475 aaKnown RBP13.2□□□□□ -0.3
LINC00933-201ENST00000557887 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
LINC00933-201ENST00000557887 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
LINC00933-201ENST00000557887 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
LINC00933-201ENST00000557887 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
LINC00933-201ENST00000557887 BICRAQ9NZM4 1560 aa13.14□□□□□ -0.31
LINC00933-201ENST00000557887 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
LINC00933-201ENST00000557887 PPP1R15AO75807 674 aaPredicted RBP13.13□□□□□ -0.31
LINC00933-201ENST00000557887 ANP32CO43423 234 aa13.12□□□□□ -0.31
LINC00933-201ENST00000557887 KANK4Q5T7N3 995 aaPredicted RBP13.12□□□□□ -0.31
LINC00933-201ENST00000557887 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
LINC00933-201ENST00000557887 HSP90AA1P07900 732 aaKnown RBP13.1□□□□□ -0.31
LINC00933-201ENST00000557887 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
LINC00933-201ENST00000557887 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
LINC00933-201ENST00000557887 HNRNPUQ00839 825 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00933-201ENST00000557887 DCAF11Q8TEB1 546 aa13.06□□□□□ -0.32
LINC00933-201ENST00000557887 RRAGDQ9NQL2 400 aaPredicted RBP13.06□□□□□ -0.32
LINC00933-201ENST00000557887 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
LINC00933-201ENST00000557887 NAP1L5Q96NT1 182 aaPredicted RBP13.04□□□□□ -0.32
LINC00933-201ENST00000557887 PRDM4Q9UKN5 801 aa13.04□□□□□ -0.32
LINC00933-201ENST00000557887 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
LINC00933-201ENST00000557887 NFKBIBQ15653 356 aa13.02□□□□□ -0.33
LINC00933-201ENST00000557887 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
LINC00933-201ENST00000557887 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
LINC00933-201ENST00000557887 TAF7LQ5H9L4 462 aa13□□□□□ -0.33
LINC00933-201ENST00000557887 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
LINC00933-201ENST00000557887 ERICH3Q5RHP9 1530 aa12.96□□□□□ -0.34
LINC00933-201ENST00000557887 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.34
LINC00933-201ENST00000557887 RGS3P49796 1198 aa12.95□□□□□ -0.34
LINC00933-201ENST00000557887 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
LINC00933-201ENST00000557887 CENPJQ9HC77 1338 aaPredicted RBP12.95□□□□□ -0.34
LINC00933-201ENST00000557887 PNNQ9H307 717 aaKnown RBP12.95□□□□□ -0.34
LINC00933-201ENST00000557887 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
LINC00933-201ENST00000557887 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
LINC00933-201ENST00000557887 SIN3AQ96ST3 1273 aa12.93□□□□□ -0.34
LINC00933-201ENST00000557887 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
LINC00933-201ENST00000557887 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
LINC00933-201ENST00000557887 CUX1P39880 1505 aa12.9□□□□□ -0.34
LINC00933-201ENST00000557887 PDCL3Q9H2J4 239 aa12.9□□□□□ -0.34
LINC00933-201ENST00000557887 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
LINC00933-201ENST00000557887 ARHGAP35Q9NRY4 1499 aa12.9□□□□□ -0.34
LINC00933-201ENST00000557887 CLCN1P35523 988 aa12.9□□□□□ -0.35
LINC00933-201ENST00000557887 NAP1L2Q9ULW6 460 aaPredicted RBP12.89□□□□□ -0.35
LINC00933-201ENST00000557887 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
LINC00933-201ENST00000557887 DDRGK1Q96HY6 314 aa12.88□□□□□ -0.35
LINC00933-201ENST00000557887 PDE4AP27815 886 aa12.88□□□□□ -0.35
LINC00933-201ENST00000557887 HIRIP3Q9BW71 556 aaPredicted RBP12.87□□□□□ -0.35
LINC00933-201ENST00000557887 CUX2O14529 1486 aa12.87□□□□□ -0.35
LINC00933-201ENST00000557887 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
LINC00933-201ENST00000557887 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
LINC00933-201ENST00000557887 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
LINC00933-201ENST00000557887 BACH2Q9BYV9 841 aa12.86□□□□□ -0.35
LINC00933-201ENST00000557887 GTF2E1P29083 439 aaPredicted RBP12.85□□□□□ -0.35
LINC00933-201ENST00000557887 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
LINC00933-201ENST00000557887 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
LINC00933-201ENST00000557887 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
LINC00933-201ENST00000557887 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
LINC00933-201ENST00000557887 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
LINC00933-201ENST00000557887 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
LINC00933-201ENST00000557887 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
LINC00933-201ENST00000557887 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
LINC00933-201ENST00000557887 STAC3Q96MF2 364 aa12.8□□□□□ -0.36
LINC00933-201ENST00000557887 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
LINC00933-201ENST00000557887 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms