RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
GABRB3-213ENST00000557765 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
GABRB3-213ENST00000557765 CLIP1P30622 1438 aa16.72■□□□□ 0.27
GABRB3-213ENST00000557765 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
GABRB3-213ENST00000557765 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
GABRB3-213ENST00000557765 CARMIL2Q6F5E8 1435 aa16.64■□□□□ 0.25
GABRB3-213ENST00000557765 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
GABRB3-213ENST00000557765 CHD1O14646 1710 aa16.63■□□□□ 0.25
GABRB3-213ENST00000557765 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
GABRB3-213ENST00000557765 FBLN2P98095 1184 aa16.61■□□□□ 0.25
GABRB3-213ENST00000557765 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
GABRB3-213ENST00000557765 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
GABRB3-213ENST00000557765 CLASP1Q7Z460 1538 aa16.58■□□□□ 0.24
GABRB3-213ENST00000557765 SHROOM2Q13796 1616 aa16.58■□□□□ 0.24
GABRB3-213ENST00000557765 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
GABRB3-213ENST00000557765 JPH4Q96JJ6 628 aa16.56■□□□□ 0.24
GABRB3-213ENST00000557765 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
GABRB3-213ENST00000557765 KIAA0556O60303 1618 aa16.52■□□□□ 0.24
GABRB3-213ENST00000557765 ARAP1Q96P48 1450 aa16.51■□□□□ 0.23
GABRB3-213ENST00000557765 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
GABRB3-213ENST00000557765 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
GABRB3-213ENST00000557765 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
GABRB3-213ENST00000557765 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
GABRB3-213ENST00000557765 APLP2Q06481 763 aa16.46■□□□□ 0.23
GABRB3-213ENST00000557765 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
GABRB3-213ENST00000557765 CCDC18Q5T9S5 1454 aa16.43■□□□□ 0.22
GABRB3-213ENST00000557765 FHOD3Q2V2M9 1422 aa16.41■□□□□ 0.22
GABRB3-213ENST00000557765 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
GABRB3-213ENST00000557765 PTPRGP23470 1445 aa16.38■□□□□ 0.21
GABRB3-213ENST00000557765 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
GABRB3-213ENST00000557765 RANGAP1P46060 587 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-213ENST00000557765 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-213ENST00000557765 RAPGEF6Q8TEU7 1601 aa16.34■□□□□ 0.21
GABRB3-213ENST00000557765 PCF11O94913 1555 aaKnown RBP16.33■□□□□ 0.2
GABRB3-213ENST00000557765 ABCA8O94911 1581 aa16.32■□□□□ 0.2
GABRB3-213ENST00000557765 TIAM1Q13009 1591 aa16.31■□□□□ 0.2
GABRB3-213ENST00000557765 UACAQ9BZF9 1416 aa16.31■□□□□ 0.2
GABRB3-213ENST00000557765 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
GABRB3-213ENST00000557765 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
GABRB3-213ENST00000557765 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
GABRB3-213ENST00000557765 ABCC2Q92887 1545 aa16.28■□□□□ 0.2
GABRB3-213ENST00000557765 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
GABRB3-213ENST00000557765 LRRC9Q6ZRR7 1453 aa16.24■□□□□ 0.19
GABRB3-213ENST00000557765 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
GABRB3-213ENST00000557765 ARHGEF11O15085 1522 aa16.22■□□□□ 0.19
GABRB3-213ENST00000557765 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
GABRB3-213ENST00000557765 KDM5BQ9UGL1 1544 aa16.21■□□□□ 0.19
GABRB3-213ENST00000557765 MTUS2Q5JR59 1369 aa16.2■□□□□ 0.18
GABRB3-213ENST00000557765 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
GABRB3-213ENST00000557765 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
GABRB3-213ENST00000557765 TROQ12816 1431 aaPredicted RBP16.16■□□□□ 0.18
GABRB3-213ENST00000557765 ATP10BO94823 1461 aa16.16■□□□□ 0.18
GABRB3-213ENST00000557765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.18
GABRB3-213ENST00000557765 TRIM26Q12899 539 aaPredicted RBP16.15■□□□□ 0.18
GABRB3-213ENST00000557765 SUPT6HQ7KZ85 1726 aaKnown RBP16.15■□□□□ 0.18
GABRB3-213ENST00000557765 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
GABRB3-213ENST00000557765 ADCY10Q96PN6 1610 aa16.13■□□□□ 0.17
GABRB3-213ENST00000557765 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
GABRB3-213ENST00000557765 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
GABRB3-213ENST00000557765 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
GABRB3-213ENST00000557765 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
GABRB3-213ENST00000557765 RIMBP3Q9UFD9 1639 aa16.11■□□□□ 0.17
GABRB3-213ENST00000557765 MIA2Q96PC5 1412 aa16.1■□□□□ 0.17
GABRB3-213ENST00000557765 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
GABRB3-213ENST00000557765 KIF14Q15058 1648 aa16.08■□□□□ 0.17
GABRB3-213ENST00000557765 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.16
GABRB3-213ENST00000557765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
GABRB3-213ENST00000557765 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
GABRB3-213ENST00000557765 ZCCHC11Q5TAX3 1644 aaKnown RBP16.07■□□□□ 0.16
GABRB3-213ENST00000557765 KANK4Q5T7N3 995 aaPredicted RBP16.06■□□□□ 0.16
GABRB3-213ENST00000557765 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
GABRB3-213ENST00000557765 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
GABRB3-213ENST00000557765 ARAP3Q8WWN8 1544 aa16.04■□□□□ 0.16
GABRB3-213ENST00000557765 MYOM3Q5VTT5 1437 aa16.04■□□□□ 0.16
GABRB3-213ENST00000557765 ITSN2Q9NZM3 1697 aa16.04■□□□□ 0.16
GABRB3-213ENST00000557765 WDR7Q9Y4E6 1490 aa16.03■□□□□ 0.16
GABRB3-213ENST00000557765 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.16
GABRB3-213ENST00000557765 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
GABRB3-213ENST00000557765 MAGI3Q5TCQ9 1506 aa16.01■□□□□ 0.15
GABRB3-213ENST00000557765 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
GABRB3-213ENST00000557765 FGD6Q6ZV73 1430 aa15.99■□□□□ 0.15
GABRB3-213ENST00000557765 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
GABRB3-213ENST00000557765 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
GABRB3-213ENST00000557765 TCOF1Q13428 1488 aaKnown RBP15.97■□□□□ 0.15
GABRB3-213ENST00000557765 ASXL2Q76L83 1435 aa15.96■□□□□ 0.15
GABRB3-213ENST00000557765 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
GABRB3-213ENST00000557765 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.14
GABRB3-213ENST00000557765 CYB5RLQ6IPT4 315 aa15.94■□□□□ 0.14
GABRB3-213ENST00000557765 ABCA9Q8IUA7 1624 aa15.94■□□□□ 0.14
GABRB3-213ENST00000557765 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
GABRB3-213ENST00000557765 GLI2P10070 1586 aa15.93■□□□□ 0.14
GABRB3-213ENST00000557765 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
GABRB3-213ENST00000557765 PLCH2O75038 1416 aa15.92■□□□□ 0.14
GABRB3-213ENST00000557765 PREX2Q70Z35 1606 aa15.91■□□□□ 0.14
GABRB3-213ENST00000557765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
GABRB3-213ENST00000557765 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
GABRB3-213ENST00000557765 KIAA1107Q9UPP5 1409 aa15.9■□□□□ 0.14
GABRB3-213ENST00000557765 CFAP74Q9C0B2 1584 aa15.9■□□□□ 0.14
GABRB3-213ENST00000557765 MYO5CQ9NQX4 1742 aa15.9■□□□□ 0.14
GABRB3-213ENST00000557765 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms