RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
RIPK3-206ENST00000557624 CTTNBP2Q8WZ74 1663 aa23.03■■□□□ 1.28
RIPK3-206ENST00000557624 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
RIPK3-206ENST00000557624 KIAA0586Q9BVV6 1533 aa22.99■■□□□ 1.27
RIPK3-206ENST00000557624 IQGAP2Q13576 1575 aa22.97■■□□□ 1.27
RIPK3-206ENST00000557624 RANGAP1P46060 587 aaPredicted RBP22.91■■□□□ 1.26
RIPK3-206ENST00000557624 TNIKQ9UKE5 1360 aa22.91■■□□□ 1.26
RIPK3-206ENST00000557624 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
RIPK3-206ENST00000557624 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
RIPK3-206ENST00000557624 UGGT2Q9NYU1 1516 aa22.83■■□□□ 1.25
RIPK3-206ENST00000557624 PRG4Q92954 1404 aaPredicted RBP22.81■■□□□ 1.24
RIPK3-206ENST00000557624 CEP162Q5TB80 1403 aa22.77■■□□□ 1.24
RIPK3-206ENST00000557624 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
RIPK3-206ENST00000557624 DISP1Q96F81 1524 aa22.75■■□□□ 1.23
RIPK3-206ENST00000557624 CLIP1P30622 1438 aa22.75■■□□□ 1.23
RIPK3-206ENST00000557624 CARMIL2Q6F5E8 1435 aa22.75■■□□□ 1.23
RIPK3-206ENST00000557624 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
RIPK3-206ENST00000557624 KIAA0556O60303 1618 aa22.73■■□□□ 1.23
RIPK3-206ENST00000557624 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
RIPK3-206ENST00000557624 EFCAB5A4FU69 1503 aa22.72■■□□□ 1.23
RIPK3-206ENST00000557624 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
RIPK3-206ENST00000557624 ARHGAP35Q9NRY4 1499 aa22.71■■□□□ 1.23
RIPK3-206ENST00000557624 TTBK1Q5TCY1 1321 aaPredicted RBP22.68■■□□□ 1.22
RIPK3-206ENST00000557624 FHOD3Q2V2M9 1422 aa22.67■■□□□ 1.22
RIPK3-206ENST00000557624 DNAJC5Q9H3Z4 198 aa22.67■■□□□ 1.22
RIPK3-206ENST00000557624 RIMBP3CA6NJZ7 1639 aa22.67■■□□□ 1.22
RIPK3-206ENST00000557624 RIMBP3BA6NNM3 1639 aa22.67■■□□□ 1.22
RIPK3-206ENST00000557624 RIMBP3Q9UFD9 1639 aa22.67■■□□□ 1.22
RIPK3-206ENST00000557624 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
RIPK3-206ENST00000557624 PTPRGP23470 1445 aa22.59■■□□□ 1.21
RIPK3-206ENST00000557624 FMN1Q68DA7 1419 aa22.51■■□□□ 1.19
RIPK3-206ENST00000557624 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
RIPK3-206ENST00000557624 PLB1Q6P1J6 1458 aa22.49■■□□□ 1.19
RIPK3-206ENST00000557624 UACAQ9BZF9 1416 aa22.44■■□□□ 1.18
RIPK3-206ENST00000557624 ABCA8O94911 1581 aa22.44■■□□□ 1.18
RIPK3-206ENST00000557624 RAPGEF6Q8TEU7 1601 aa22.44■■□□□ 1.18
RIPK3-206ENST00000557624 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
RIPK3-206ENST00000557624 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
RIPK3-206ENST00000557624 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
RIPK3-206ENST00000557624 ADCY10Q96PN6 1610 aa22.4■■□□□ 1.18
RIPK3-206ENST00000557624 ABCC2Q92887 1545 aa22.4■■□□□ 1.18
RIPK3-206ENST00000557624 CASKIN1Q8WXD9 1431 aa22.39■■□□□ 1.17
RIPK3-206ENST00000557624 ARID3CA6NKF2 412 aa22.39■■□□□ 1.17
RIPK3-206ENST00000557624 UHRF1BP1LA0JNW5 1464 aa22.37■■□□□ 1.17
RIPK3-206ENST00000557624 FYCO1Q9BQS8 1478 aa22.37■■□□□ 1.17
RIPK3-206ENST00000557624 HECW1Q76N89 1606 aa22.37■■□□□ 1.17
RIPK3-206ENST00000557624 NUP153P49790 1475 aaKnown RBP22.35■■□□□ 1.17
RIPK3-206ENST00000557624 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
RIPK3-206ENST00000557624 EPRSP07814 1512 aaKnown RBP22.28■■□□□ 1.16
RIPK3-206ENST00000557624 CDK13Q14004 1512 aaKnown RBP22.28■■□□□ 1.16
RIPK3-206ENST00000557624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
RIPK3-206ENST00000557624 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
RIPK3-206ENST00000557624 ZCCHC11Q5TAX3 1644 aaKnown RBP22.27■■□□□ 1.16
RIPK3-206ENST00000557624 KDM5BQ9UGL1 1544 aa22.27■■□□□ 1.16
RIPK3-206ENST00000557624 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
RIPK3-206ENST00000557624 ATP10BO94823 1461 aa22.27■■□□□ 1.16
RIPK3-206ENST00000557624 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
RIPK3-206ENST00000557624 APLP2Q06481 763 aa22.21■■□□□ 1.15
RIPK3-206ENST00000557624 CFAP43Q8NDM7 1665 aa22.19■■□□□ 1.14
RIPK3-206ENST00000557624 TIAM1Q13009 1591 aa22.18■■□□□ 1.14
RIPK3-206ENST00000557624 ASXL2Q76L83 1435 aa22.15■■□□□ 1.14
RIPK3-206ENST00000557624 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.14
RIPK3-206ENST00000557624 MAPKBP1O60336 1514 aa22.13■■□□□ 1.13
RIPK3-206ENST00000557624 MAP3K1Q13233 1512 aa22.13■■□□□ 1.13
RIPK3-206ENST00000557624 PLEKHD1A6NEE1 506 aa22.13■■□□□ 1.13
RIPK3-206ENST00000557624 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
RIPK3-206ENST00000557624 WDR7Q9Y4E6 1490 aa22.1■■□□□ 1.13
RIPK3-206ENST00000557624 MTUS2Q5JR59 1369 aa22.1■■□□□ 1.13
RIPK3-206ENST00000557624 KANK4Q5T7N3 995 aaPredicted RBP22.09■■□□□ 1.13
RIPK3-206ENST00000557624 TROQ12816 1431 aaPredicted RBP22.07■■□□□ 1.12
RIPK3-206ENST00000557624 KCNH8Q96L42 1107 aa22.07■■□□□ 1.12
RIPK3-206ENST00000557624 LRRC9Q6ZRR7 1453 aa22.07■■□□□ 1.12
RIPK3-206ENST00000557624 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
RIPK3-206ENST00000557624 EHBP1L1Q8N3D4 1523 aa22.05■■□□□ 1.12
RIPK3-206ENST00000557624 KIF14Q15058 1648 aa22.01■■□□□ 1.11
RIPK3-206ENST00000557624 SUPT6HQ7KZ85 1726 aaKnown RBP21.97■■□□□ 1.11
RIPK3-206ENST00000557624 DIP2BQ9P265 1576 aa21.97■■□□□ 1.11
RIPK3-206ENST00000557624 ABCC10Q5T3U5 1492 aa21.97■■□□□ 1.11
RIPK3-206ENST00000557624 FAM69CQ0P6D2 419 aa21.95■■□□□ 1.1
RIPK3-206ENST00000557624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.94■■□□□ 1.1
RIPK3-206ENST00000557624 NCOA2Q15596 1464 aa21.94■■□□□ 1.1
RIPK3-206ENST00000557624 TTC37Q6PGP7 1564 aa21.94■■□□□ 1.1
RIPK3-206ENST00000557624 KIF13AQ9H1H9 1805 aa21.92■■□□□ 1.1
RIPK3-206ENST00000557624 ABCA9Q8IUA7 1624 aa21.92■■□□□ 1.1
RIPK3-206ENST00000557624 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
RIPK3-206ENST00000557624 GLI2P10070 1586 aa21.9■■□□□ 1.1
RIPK3-206ENST00000557624 CCNB3Q8WWL7 1395 aa21.88■■□□□ 1.09
RIPK3-206ENST00000557624 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
RIPK3-206ENST00000557624 MAP3K4Q9Y6R4 1608 aa21.85■■□□□ 1.09
RIPK3-206ENST00000557624 CD109Q6YHK3 1445 aa21.85■■□□□ 1.09
RIPK3-206ENST00000557624 PHLDB1Q86UU1 1377 aa21.84■■□□□ 1.09
RIPK3-206ENST00000557624 CDC42BPAQ5VT25 1732 aa21.84■■□□□ 1.09
RIPK3-206ENST00000557624 TSPOAP1O95153 1857 aa21.83■■□□□ 1.09
RIPK3-206ENST00000557624 GPATCH8Q9UKJ3 1502 aaKnown RBP21.82■■□□□ 1.08
RIPK3-206ENST00000557624 PREX2Q70Z35 1606 aa21.81■■□□□ 1.08
RIPK3-206ENST00000557624 ITSN2Q9NZM3 1697 aa21.81■■□□□ 1.08
RIPK3-206ENST00000557624 MYOM3Q5VTT5 1437 aa21.8■■□□□ 1.08
RIPK3-206ENST00000557624 PLCH2O75038 1416 aa21.8■■□□□ 1.08
RIPK3-206ENST00000557624 CDC42BPBQ9Y5S2 1711 aa21.79■■□□□ 1.08
RIPK3-206ENST00000557624 ARHGAP5Q13017 1502 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms