RNA–Protein interactions for RNA: ENST00000557488.1

ITGA7-219, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-219ENST00000557488 CYB5RLQ6IPT4 315 aa24.25■■□□□ 1.47
ITGA7-219ENST00000557488 JPH4Q96JJ6 628 aa24.24■■□□□ 1.47
ITGA7-219ENST00000557488 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
ITGA7-219ENST00000557488 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
ITGA7-219ENST00000557488 PRXQ9BXM0 1461 aa24.21■■□□□ 1.47
ITGA7-219ENST00000557488 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
ITGA7-219ENST00000557488 KIAA0586Q9BVV6 1533 aa24.18■■□□□ 1.46
ITGA7-219ENST00000557488 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
ITGA7-219ENST00000557488 EEA1Q15075 1411 aa24.11■■□□□ 1.45
ITGA7-219ENST00000557488 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.45
ITGA7-219ENST00000557488 IQGAP2Q13576 1575 aa24.03■■□□□ 1.44
ITGA7-219ENST00000557488 CTTNBP2Q8WZ74 1663 aa24■■□□□ 1.43
ITGA7-219ENST00000557488 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
ITGA7-219ENST00000557488 DISP1Q96F81 1524 aa23.95■■□□□ 1.43
ITGA7-219ENST00000557488 KIF21BO75037 1637 aa23.94■■□□□ 1.42
ITGA7-219ENST00000557488 UGGT2Q9NYU1 1516 aa23.93■■□□□ 1.42
ITGA7-219ENST00000557488 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.41
ITGA7-219ENST00000557488 P3H3Q8IVL6 736 aa23.87■■□□□ 1.41
ITGA7-219ENST00000557488 CARMIL2Q6F5E8 1435 aa23.85■■□□□ 1.41
ITGA7-219ENST00000557488 PTPRGP23470 1445 aa23.84■■□□□ 1.41
ITGA7-219ENST00000557488 TNIKQ9UKE5 1360 aa23.84■■□□□ 1.41
ITGA7-219ENST00000557488 KIAA0556O60303 1618 aa23.84■■□□□ 1.41
ITGA7-219ENST00000557488 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
ITGA7-219ENST00000557488 GOLGA3Q08378 1498 aa23.8■■□□□ 1.4
ITGA7-219ENST00000557488 ADCY10Q96PN6 1610 aa23.77■■□□□ 1.4
ITGA7-219ENST00000557488 SAMD9Q5K651 1589 aa23.7■■□□□ 1.38
ITGA7-219ENST00000557488 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
ITGA7-219ENST00000557488 PLB1Q6P1J6 1458 aa23.68■■□□□ 1.38
ITGA7-219ENST00000557488 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
ITGA7-219ENST00000557488 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
ITGA7-219ENST00000557488 FHOD3Q2V2M9 1422 aa23.64■■□□□ 1.37
ITGA7-219ENST00000557488 NPM1P06748 294 aaKnown RBP eCLIP23.61■■□□□ 1.37
ITGA7-219ENST00000557488 UHRF1BP1LA0JNW5 1464 aa23.61■■□□□ 1.37
ITGA7-219ENST00000557488 ABCA8O94911 1581 aa23.61■■□□□ 1.37
ITGA7-219ENST00000557488 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
ITGA7-219ENST00000557488 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.37
ITGA7-219ENST00000557488 ARID3CA6NKF2 412 aa23.58■■□□□ 1.37
ITGA7-219ENST00000557488 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
ITGA7-219ENST00000557488 EFCAB5A4FU69 1503 aa23.52■■□□□ 1.36
ITGA7-219ENST00000557488 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
ITGA7-219ENST00000557488 KIF13AQ9H1H9 1805 aa23.5■■□□□ 1.35
ITGA7-219ENST00000557488 MAPKBP1O60336 1514 aa23.5■■□□□ 1.35
ITGA7-219ENST00000557488 ASXL2Q76L83 1435 aa23.47■■□□□ 1.35
ITGA7-219ENST00000557488 ATP10BO94823 1461 aa23.47■■□□□ 1.35
ITGA7-219ENST00000557488 FAM69CQ0P6D2 419 aa23.46■■□□□ 1.35
ITGA7-219ENST00000557488 RAPGEF6Q8TEU7 1601 aa23.46■■□□□ 1.35
ITGA7-219ENST00000557488 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
ITGA7-219ENST00000557488 NUP153P49790 1475 aaKnown RBP23.42■■□□□ 1.34
ITGA7-219ENST00000557488 CLIP1P30622 1438 aa23.42■■□□□ 1.34
ITGA7-219ENST00000557488 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
ITGA7-219ENST00000557488 KCNH8Q96L42 1107 aa23.37■■□□□ 1.33
ITGA7-219ENST00000557488 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
ITGA7-219ENST00000557488 CEP162Q5TB80 1403 aa23.34■■□□□ 1.33
ITGA7-219ENST00000557488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.34■■□□□ 1.33
ITGA7-219ENST00000557488 HNRNPUL2Q1KMD3 747 aaKnown RBP23.34■■□□□ 1.33
ITGA7-219ENST00000557488 TSPOAP1O95153 1857 aa23.33■■□□□ 1.33
ITGA7-219ENST00000557488 EPRSP07814 1512 aaKnown RBP23.33■■□□□ 1.32
ITGA7-219ENST00000557488 FMN1Q68DA7 1419 aa23.32■■□□□ 1.32
ITGA7-219ENST00000557488 LRRIQ1Q96JM4 1722 aa23.31■■□□□ 1.32
ITGA7-219ENST00000557488 CDK13Q14004 1512 aaKnown RBP23.31■■□□□ 1.32
ITGA7-219ENST00000557488 WDR7Q9Y4E6 1490 aa23.3■■□□□ 1.32
ITGA7-219ENST00000557488 GLI2P10070 1586 aa23.27■■□□□ 1.32
ITGA7-219ENST00000557488 PCF11O94913 1555 aaKnown RBP23.25■■□□□ 1.31
ITGA7-219ENST00000557488 PPRC1Q5VV67 1664 aaKnown RBP23.23■■□□□ 1.31
ITGA7-219ENST00000557488 CASKIN1Q8WXD9 1431 aa23.22■■□□□ 1.31
ITGA7-219ENST00000557488 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
ITGA7-219ENST00000557488 HECW1Q76N89 1606 aa23.21■■□□□ 1.31
ITGA7-219ENST00000557488 MAP3K4Q9Y6R4 1608 aa23.19■■□□□ 1.3
ITGA7-219ENST00000557488 CD109Q6YHK3 1445 aa23.13■■□□□ 1.29
ITGA7-219ENST00000557488 MAGI3Q5TCQ9 1506 aa23.12■■□□□ 1.29
ITGA7-219ENST00000557488 FYCO1Q9BQS8 1478 aa23.11■■□□□ 1.29
ITGA7-219ENST00000557488 CFAP43Q8NDM7 1665 aa23.09■■□□□ 1.29
ITGA7-219ENST00000557488 ABCA9Q8IUA7 1624 aa23.09■■□□□ 1.29
ITGA7-219ENST00000557488 COL17A1Q9UMD9 1497 aaPredicted RBP23.08■■□□□ 1.29
ITGA7-219ENST00000557488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.08■■□□□ 1.28
ITGA7-219ENST00000557488 KIF14Q15058 1648 aa23.05■■□□□ 1.28
ITGA7-219ENST00000557488 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
ITGA7-219ENST00000557488 TTC37Q6PGP7 1564 aa23.03■■□□□ 1.28
ITGA7-219ENST00000557488 CDK11AQ9UQ88 783 aaPredicted RBP23.03■■□□□ 1.28
ITGA7-219ENST00000557488 VPS8Q8N3P4 1428 aa23.02■■□□□ 1.28
ITGA7-219ENST00000557488 CCDC18Q5T9S5 1454 aa23.02■■□□□ 1.28
ITGA7-219ENST00000557488 KDM6BO15054 1643 aa22.98■■□□□ 1.27
ITGA7-219ENST00000557488 TEX14Q8IWB6 1497 aa22.96■■□□□ 1.27
ITGA7-219ENST00000557488 KANK4Q5T7N3 995 aaPredicted RBP22.93■■□□□ 1.26
ITGA7-219ENST00000557488 PLCH2O75038 1416 aa22.91■■□□□ 1.26
ITGA7-219ENST00000557488 RAPGEF3O95398 923 aa22.88■■□□□ 1.25
ITGA7-219ENST00000557488 TIAM1Q13009 1591 aa22.88■■□□□ 1.25
ITGA7-219ENST00000557488 CDC42BPBQ9Y5S2 1711 aa22.88■■□□□ 1.25
ITGA7-219ENST00000557488 MTUS2Q5JR59 1369 aa22.88■■□□□ 1.25
ITGA7-219ENST00000557488 MYO5CQ9NQX4 1742 aa22.87■■□□□ 1.25
ITGA7-219ENST00000557488 AKNAQ7Z591 1439 aa22.86■■□□□ 1.25
ITGA7-219ENST00000557488 FANCAO15360 1455 aa22.85■■□□□ 1.25
ITGA7-219ENST00000557488 NEO1Q92859 1461 aa22.85■■□□□ 1.25
ITGA7-219ENST00000557488 ARAP3Q8WWN8 1544 aa22.84■■□□□ 1.25
ITGA7-219ENST00000557488 CDC42BPAQ5VT25 1732 aa22.84■■□□□ 1.25
ITGA7-219ENST00000557488 GPATCH8Q9UKJ3 1502 aaKnown RBP22.82■■□□□ 1.24
ITGA7-219ENST00000557488 EFCAB2Q5VUJ9 269 aa22.81■■□□□ 1.24
ITGA7-219ENST00000557488 LRRC9Q6ZRR7 1453 aa22.79■■□□□ 1.24
ITGA7-219ENST00000557488 EHBP1L1Q8N3D4 1523 aa22.79■■□□□ 1.24
ITGA7-219ENST00000557488 PHLDB1Q86UU1 1377 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms