RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
PPP4R3A-212ENST00000557382 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
PPP4R3A-212ENST00000557382 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
PPP4R3A-212ENST00000557382 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
PPP4R3A-212ENST00000557382 KIF21AQ7Z4S6 1674 aa13.46□□□□□ -0.26
PPP4R3A-212ENST00000557382 RANGAP1P46060 587 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3A-212ENST00000557382 TIAM1Q13009 1591 aa13.44□□□□□ -0.26
PPP4R3A-212ENST00000557382 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.261e-7■■■■■ 30.9
PPP4R3A-212ENST00000557382 CFAP43Q8NDM7 1665 aa13.41□□□□□ -0.26
PPP4R3A-212ENST00000557382 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.26
PPP4R3A-212ENST00000557382 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
PPP4R3A-212ENST00000557382 KANK4Q5T7N3 995 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-212ENST00000557382 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
PPP4R3A-212ENST00000557382 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
PPP4R3A-212ENST00000557382 FYCO1Q9BQS8 1478 aa13.37□□□□□ -0.27
PPP4R3A-212ENST00000557382 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
PPP4R3A-212ENST00000557382 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
PPP4R3A-212ENST00000557382 CCNB3Q8WWL7 1395 aa13.35□□□□□ -0.27
PPP4R3A-212ENST00000557382 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
PPP4R3A-212ENST00000557382 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-212ENST00000557382 SAMD9Q5K651 1589 aa13.34□□□□□ -0.27
PPP4R3A-212ENST00000557382 FMN1Q68DA7 1419 aa13.33□□□□□ -0.28
PPP4R3A-212ENST00000557382 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
PPP4R3A-212ENST00000557382 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
PPP4R3A-212ENST00000557382 THOC2Q8NI27 1593 aaKnown RBP13.3□□□□□ -0.28
PPP4R3A-212ENST00000557382 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
PPP4R3A-212ENST00000557382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.29□□□□□ -0.28
PPP4R3A-212ENST00000557382 FHOD3Q2V2M9 1422 aa13.28□□□□□ -0.28
PPP4R3A-212ENST00000557382 IFT140Q96RY7 1462 aa13.28□□□□□ -0.28
PPP4R3A-212ENST00000557382 WDR62O43379 1518 aa13.28□□□□□ -0.28
PPP4R3A-212ENST00000557382 ADAMTS12P58397 1594 aa13.26□□□□□ -0.29
PPP4R3A-212ENST00000557382 SNAPC4Q5SXM2 1469 aa13.26□□□□□ -0.29
PPP4R3A-212ENST00000557382 DHX57Q6P158 1386 aaKnown RBP13.26□□□□□ -0.29
PPP4R3A-212ENST00000557382 GRIN2BQ13224 1484 aa13.25□□□□□ -0.29
PPP4R3A-212ENST00000557382 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3A-212ENST00000557382 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.29
PPP4R3A-212ENST00000557382 IQGAP2Q13576 1575 aa13.2□□□□□ -0.3
PPP4R3A-212ENST00000557382 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
PPP4R3A-212ENST00000557382 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
PPP4R3A-212ENST00000557382 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
PPP4R3A-212ENST00000557382 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
PPP4R3A-212ENST00000557382 LRRIQ1Q96JM4 1722 aa13.18□□□□□ -0.3
PPP4R3A-212ENST00000557382 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
PPP4R3A-212ENST00000557382 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
PPP4R3A-212ENST00000557382 HECW1Q76N89 1606 aa13.16□□□□□ -0.3
PPP4R3A-212ENST00000557382 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
PPP4R3A-212ENST00000557382 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
PPP4R3A-212ENST00000557382 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
PPP4R3A-212ENST00000557382 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
PPP4R3A-212ENST00000557382 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
PPP4R3A-212ENST00000557382 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3A-212ENST00000557382 ARHGEF11O15085 1522 aa13.12□□□□□ -0.31
PPP4R3A-212ENST00000557382 MAGI1Q96QZ7 1491 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3A-212ENST00000557382 EIF4G3O43432 1585 aaKnown RBP13.11□□□□□ -0.31
PPP4R3A-212ENST00000557382 ZNF608Q9ULD9 1512 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3A-212ENST00000557382 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
PPP4R3A-212ENST00000557382 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
PPP4R3A-212ENST00000557382 NCOA2Q15596 1464 aa13.09□□□□□ -0.31
PPP4R3A-212ENST00000557382 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
PPP4R3A-212ENST00000557382 GRIN2AQ12879 1464 aa13.08□□□□□ -0.32
PPP4R3A-212ENST00000557382 MAPKBP1O60336 1514 aa13.08□□□□□ -0.32
PPP4R3A-212ENST00000557382 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
PPP4R3A-212ENST00000557382 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
PPP4R3A-212ENST00000557382 ITGAEP38570 1179 aa13.06□□□□□ -0.32
PPP4R3A-212ENST00000557382 EPRSP07814 1512 aaKnown RBP13.06□□□□□ -0.32
PPP4R3A-212ENST00000557382 TCOF1Q13428 1488 aaKnown RBP13.05□□□□□ -0.32
PPP4R3A-212ENST00000557382 PTPN23Q9H3S7 1636 aa13.04□□□□□ -0.32
PPP4R3A-212ENST00000557382 HFM1A2PYH4 1435 aa13.04□□□□□ -0.32
PPP4R3A-212ENST00000557382 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
PPP4R3A-212ENST00000557382 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
PPP4R3A-212ENST00000557382 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
PPP4R3A-212ENST00000557382 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
PPP4R3A-212ENST00000557382 MAGI3Q5TCQ9 1506 aa13.02□□□□□ -0.33
PPP4R3A-212ENST00000557382 ACIN1Q9UKV3 1341 aaKnown RBP13.01□□□□□ -0.33
PPP4R3A-212ENST00000557382 AKNAQ7Z591 1439 aa13.01□□□□□ -0.33
PPP4R3A-212ENST00000557382 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
PPP4R3A-212ENST00000557382 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
PPP4R3A-212ENST00000557382 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
PPP4R3A-212ENST00000557382 NUP160Q12769 1436 aa12.98□□□□□ -0.33
PPP4R3A-212ENST00000557382 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
PPP4R3A-212ENST00000557382 UACAQ9BZF9 1416 aa12.97□□□□□ -0.33
PPP4R3A-212ENST00000557382 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
PPP4R3A-212ENST00000557382 NAIPQ13075 1403 aa12.96□□□□□ -0.34
PPP4R3A-212ENST00000557382 PTPRKQ15262 1439 aa12.96□□□□□ -0.34
PPP4R3A-212ENST00000557382 CDK13Q14004 1512 aaKnown RBP12.95□□□□□ -0.34
PPP4R3A-212ENST00000557382 NUP153P49790 1475 aaKnown RBP12.94□□□□□ -0.34
PPP4R3A-212ENST00000557382 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
PPP4R3A-212ENST00000557382 CDK11AQ9UQ88 783 aaPredicted RBP12.94□□□□□ -0.34
PPP4R3A-212ENST00000557382 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
PPP4R3A-212ENST00000557382 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
PPP4R3A-212ENST00000557382 ROCK1Q13464 1354 aa12.9□□□□□ -0.34
PPP4R3A-212ENST00000557382 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
PPP4R3A-212ENST00000557382 MIER1Q8N108 512 aa12.89□□□□□ -0.35
PPP4R3A-212ENST00000557382 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
PPP4R3A-212ENST00000557382 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
PPP4R3A-212ENST00000557382 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-212ENST00000557382 ABCA8O94911 1581 aa12.86□□□□□ -0.35
PPP4R3A-212ENST00000557382 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
PPP4R3A-212ENST00000557382 JPH4Q96JJ6 628 aa12.86□□□□□ -0.35
PPP4R3A-212ENST00000557382 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms