RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
PCNX4-213ENST00000556907 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
PCNX4-213ENST00000556907 ARHGEF11O15085 1522 aa26.96■■□□□ 1.91
PCNX4-213ENST00000556907 IQGAP2Q13576 1575 aa26.92■■□□□ 1.9
PCNX4-213ENST00000556907 RIMBP3CA6NJZ7 1639 aa26.91■■□□□ 1.9
PCNX4-213ENST00000556907 RIMBP3BA6NNM3 1639 aa26.91■■□□□ 1.9
PCNX4-213ENST00000556907 RIMBP3Q9UFD9 1639 aa26.91■■□□□ 1.9
PCNX4-213ENST00000556907 CTTNBP2Q8WZ74 1663 aa26.89■■□□□ 1.89
PCNX4-213ENST00000556907 PRG4Q92954 1404 aaPredicted RBP26.85■■□□□ 1.89
PCNX4-213ENST00000556907 GOLGA3Q08378 1498 aa26.85■■□□□ 1.89
PCNX4-213ENST00000556907 CARMIL2Q6F5E8 1435 aa26.8■■□□□ 1.88
PCNX4-213ENST00000556907 UGGT2Q9NYU1 1516 aa26.8■■□□□ 1.88
PCNX4-213ENST00000556907 UBTFP17480 764 aaKnown RBP26.75■■□□□ 1.87
PCNX4-213ENST00000556907 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
PCNX4-213ENST00000556907 ERCC6L2Q5T890 1561 aa26.74■■□□□ 1.87
PCNX4-213ENST00000556907 CYB5RLQ6IPT4 315 aa26.71■■□□□ 1.87
PCNX4-213ENST00000556907 DISP1Q96F81 1524 aa26.68■■□□□ 1.86
PCNX4-213ENST00000556907 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
PCNX4-213ENST00000556907 KIAA0556O60303 1618 aa26.63■■□□□ 1.85
PCNX4-213ENST00000556907 EHMT2Q96KQ7 1210 aa26.62■■□□□ 1.85
PCNX4-213ENST00000556907 PTPRGP23470 1445 aa26.6■■□□□ 1.85
PCNX4-213ENST00000556907 SAMD9Q5K651 1589 aa26.57■■□□□ 1.84
PCNX4-213ENST00000556907 EFCAB5A4FU69 1503 aa26.56■■□□□ 1.84
PCNX4-213ENST00000556907 RANGAP1P46060 587 aaPredicted RBP26.47■■□□□ 1.83
PCNX4-213ENST00000556907 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
PCNX4-213ENST00000556907 UACAQ9BZF9 1416 aa26.44■■□□□ 1.82
PCNX4-213ENST00000556907 TTBK1Q5TCY1 1321 aaPredicted RBP26.42■■□□□ 1.82
PCNX4-213ENST00000556907 UHRF1BP1LA0JNW5 1464 aa26.42■■□□□ 1.82
PCNX4-213ENST00000556907 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
PCNX4-213ENST00000556907 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.82
PCNX4-213ENST00000556907 NPM1P06748 294 aaKnown RBP eCLIP26.39■■□□□ 1.82
PCNX4-213ENST00000556907 FHOD3Q2V2M9 1422 aa26.38■■□□□ 1.81
PCNX4-213ENST00000556907 ADCY10Q96PN6 1610 aa26.37■■□□□ 1.81
PCNX4-213ENST00000556907 ABCC2Q92887 1545 aa26.37■■□□□ 1.81
PCNX4-213ENST00000556907 CLIP1P30622 1438 aa26.36■■□□□ 1.81
PCNX4-213ENST00000556907 ABCA8O94911 1581 aa26.34■■□□□ 1.81
PCNX4-213ENST00000556907 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
PCNX4-213ENST00000556907 PLB1Q6P1J6 1458 aa26.32■■□□□ 1.8
PCNX4-213ENST00000556907 CEP162Q5TB80 1403 aa26.29■■□□□ 1.8
PCNX4-213ENST00000556907 KDM5BQ9UGL1 1544 aa26.27■■□□□ 1.8
PCNX4-213ENST00000556907 RAPGEF6Q8TEU7 1601 aa26.25■■□□□ 1.79
PCNX4-213ENST00000556907 MAPKBP1O60336 1514 aa26.23■■□□□ 1.79
PCNX4-213ENST00000556907 ZCCHC11Q5TAX3 1644 aaKnown RBP26.16■■□□□ 1.78
PCNX4-213ENST00000556907 NUP153P49790 1475 aaKnown RBP26.14■■□□□ 1.78
PCNX4-213ENST00000556907 ATP10BO94823 1461 aa26.13■■□□□ 1.77
PCNX4-213ENST00000556907 CASKIN1Q8WXD9 1431 aa26.12■■□□□ 1.77
PCNX4-213ENST00000556907 HECW1Q76N89 1606 aa26.11■■□□□ 1.77
PCNX4-213ENST00000556907 ASXL2Q76L83 1435 aa26.1■■□□□ 1.77
PCNX4-213ENST00000556907 FYCO1Q9BQS8 1478 aa26.07■■□□□ 1.76
PCNX4-213ENST00000556907 TRHP20396 242 aaPredicted RBP26.07■■□□□ 1.76
PCNX4-213ENST00000556907 ABCC10Q5T3U5 1492 aa26.05■■□□□ 1.76
PCNX4-213ENST00000556907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
PCNX4-213ENST00000556907 HNRNPUL2Q1KMD3 747 aaKnown RBP26.05■■□□□ 1.76
PCNX4-213ENST00000556907 ATP1B4Q9UN42 357 aaPredicted RBP26.05■■□□□ 1.76
PCNX4-213ENST00000556907 WDR7Q9Y4E6 1490 aa26.04■■□□□ 1.76
PCNX4-213ENST00000556907 EPRSP07814 1512 aaKnown RBP26.03■■□□□ 1.76
PCNX4-213ENST00000556907 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
PCNX4-213ENST00000556907 ARID3CA6NKF2 412 aa26.01■■□□□ 1.75
PCNX4-213ENST00000556907 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
PCNX4-213ENST00000556907 CDK11AQ9UQ88 783 aaPredicted RBP26.01■■□□□ 1.75
PCNX4-213ENST00000556907 PLEKHD1A6NEE1 506 aa26■■□□□ 1.75
PCNX4-213ENST00000556907 VPS8Q8N3P4 1428 aa25.99■■□□□ 1.75
PCNX4-213ENST00000556907 DIP2BQ9P265 1576 aa25.99■■□□□ 1.75
PCNX4-213ENST00000556907 FAM69CQ0P6D2 419 aa25.97■■□□□ 1.75
PCNX4-213ENST00000556907 GLI2P10070 1586 aa25.96■■□□□ 1.75
PCNX4-213ENST00000556907 KIF13AQ9H1H9 1805 aa25.95■■□□□ 1.74
PCNX4-213ENST00000556907 CDK13Q14004 1512 aaKnown RBP25.93■■□□□ 1.74
PCNX4-213ENST00000556907 LRRIQ1Q96JM4 1722 aa25.89■■□□□ 1.74
PCNX4-213ENST00000556907 KCNH8Q96L42 1107 aa25.89■■□□□ 1.74
PCNX4-213ENST00000556907 TROQ12816 1431 aaPredicted RBP25.84■■□□□ 1.73
PCNX4-213ENST00000556907 CFAP43Q8NDM7 1665 aa25.81■■□□□ 1.72
PCNX4-213ENST00000556907 MAP3K1Q13233 1512 aa25.8■■□□□ 1.72
PCNX4-213ENST00000556907 MAP3K4Q9Y6R4 1608 aa25.8■■□□□ 1.72
PCNX4-213ENST00000556907 ABCA9Q8IUA7 1624 aa25.79■■□□□ 1.72
PCNX4-213ENST00000556907 CD109Q6YHK3 1445 aa25.78■■□□□ 1.72
PCNX4-213ENST00000556907 APLP2Q06481 763 aa25.76■■□□□ 1.71
PCNX4-213ENST00000556907 TEX14Q8IWB6 1497 aa25.74■■□□□ 1.71
PCNX4-213ENST00000556907 MTUS2Q5JR59 1369 aa25.74■■□□□ 1.71
PCNX4-213ENST00000556907 KIF14Q15058 1648 aa25.74■■□□□ 1.71
PCNX4-213ENST00000556907 TIAM1Q13009 1591 aa25.73■■□□□ 1.71
PCNX4-213ENST00000556907 MAGI3Q5TCQ9 1506 aa25.73■■□□□ 1.71
PCNX4-213ENST00000556907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.72■■□□□ 1.71
PCNX4-213ENST00000556907 TSPOAP1O95153 1857 aa25.71■■□□□ 1.71
PCNX4-213ENST00000556907 EHBP1L1Q8N3D4 1523 aa25.69■■□□□ 1.7
PCNX4-213ENST00000556907 PPRC1Q5VV67 1664 aaKnown RBP25.67■■□□□ 1.7
PCNX4-213ENST00000556907 PHLDB1Q86UU1 1377 aa25.66■■□□□ 1.7
PCNX4-213ENST00000556907 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.69
PCNX4-213ENST00000556907 TTC37Q6PGP7 1564 aa25.64■■□□□ 1.69
PCNX4-213ENST00000556907 ARAP3Q8WWN8 1544 aa25.63■■□□□ 1.69
PCNX4-213ENST00000556907 PLCH2O75038 1416 aa25.63■■□□□ 1.69
PCNX4-213ENST00000556907 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
PCNX4-213ENST00000556907 NEO1Q92859 1461 aa25.6■■□□□ 1.69
PCNX4-213ENST00000556907 SUPT6HQ7KZ85 1726 aaKnown RBP25.57■■□□□ 1.68
PCNX4-213ENST00000556907 CFAP74Q9C0B2 1584 aa25.57■■□□□ 1.68
PCNX4-213ENST00000556907 EFCAB2Q5VUJ9 269 aa25.56■■□□□ 1.68
PCNX4-213ENST00000556907 FANCAO15360 1455 aa25.54■■□□□ 1.68
PCNX4-213ENST00000556907 KANK4Q5T7N3 995 aaPredicted RBP25.54■■□□□ 1.68
PCNX4-213ENST00000556907 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
PCNX4-213ENST00000556907 NCOA2Q15596 1464 aa25.51■■□□□ 1.67
PCNX4-213ENST00000556907 GPATCH8Q9UKJ3 1502 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms