RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ERCC6L2Q5T890 1561 aa38.62■■■■□ 3.77
TDP1-216ENST00000556867 RAPGEF2Q9Y4G8 1499 aa38.6■■■■□ 3.77
TDP1-216ENST00000556867 JPH4Q96JJ6 628 aa38.56■■■■□ 3.76
TDP1-216ENST00000556867 PRG4Q92954 1404 aaPredicted RBP38.52■■■■□ 3.76
TDP1-216ENST00000556867 CHIC1Q5VXU3 224 aa38.49■■■■□ 3.75
TDP1-216ENST00000556867 PRXQ9BXM0 1461 aa38.47■■■■□ 3.75
TDP1-216ENST00000556867 EEA1Q15075 1411 aa38.44■■■■□ 3.74
TDP1-216ENST00000556867 IQGAP2Q13576 1575 aa38.4■■■■□ 3.74
TDP1-216ENST00000556867 CSRNP3Q8WYN3 585 aa38.34■■■■□ 3.73
TDP1-216ENST00000556867 CTTNBP2Q8WZ74 1663 aa38.28■■■■□ 3.72
TDP1-216ENST00000556867 UGGT2Q9NYU1 1516 aa38.21■■■■□ 3.71
TDP1-216ENST00000556867 CARMIL2Q6F5E8 1435 aa38.19■■■■□ 3.7
TDP1-216ENST00000556867 DISP1Q96F81 1524 aa38.13■■■■□ 3.69
TDP1-216ENST00000556867 FAM9AQ8IZU1 332 aaPredicted RBP38.13■■■■□ 3.69
TDP1-216ENST00000556867 TNIKQ9UKE5 1360 aa38.07■■■■□ 3.69
TDP1-216ENST00000556867 KIF21BO75037 1637 aa38.07■■■■□ 3.68
TDP1-216ENST00000556867 KIAA0556O60303 1618 aa38.05■■■■□ 3.68
TDP1-216ENST00000556867 PTPRGP23470 1445 aa38.04■■■■□ 3.68
TDP1-216ENST00000556867 ADCY10Q96PN6 1610 aa37.99■■■■□ 3.67
TDP1-216ENST00000556867 GOLGA3Q08378 1498 aa37.96■■■■□ 3.67
TDP1-216ENST00000556867 TRHP20396 242 aaPredicted RBP37.89■■■■□ 3.66
TDP1-216ENST00000556867 TTBK1Q5TCY1 1321 aaPredicted RBP37.87■■■■□ 3.65
TDP1-216ENST00000556867 UHRF1BP1LA0JNW5 1464 aa37.82■■■■□ 3.64
TDP1-216ENST00000556867 UACAQ9BZF9 1416 aa37.8■■■■□ 3.64
TDP1-216ENST00000556867 NPM1P06748 294 aaKnown RBP eCLIP37.79■■■■□ 3.64
TDP1-216ENST00000556867 SAMD9Q5K651 1589 aa37.79■■■■□ 3.64
TDP1-216ENST00000556867 MAPKBP1O60336 1514 aa37.78■■■■□ 3.64
TDP1-216ENST00000556867 ABCC2Q92887 1545 aa37.77■■■■□ 3.64
TDP1-216ENST00000556867 PLB1Q6P1J6 1458 aa37.64■■■■□ 3.62
TDP1-216ENST00000556867 ABCA8O94911 1581 aa37.64■■■■□ 3.62
TDP1-216ENST00000556867 KIF13AQ9H1H9 1805 aa37.63■■■■□ 3.61
TDP1-216ENST00000556867 KDM5BQ9UGL1 1544 aa37.62■■■■□ 3.61
TDP1-216ENST00000556867 UBTFP17480 764 aaKnown RBP37.62■■■■□ 3.61
TDP1-216ENST00000556867 P3H3Q8IVL6 736 aa37.6■■■■□ 3.61
TDP1-216ENST00000556867 EHMT2Q96KQ7 1210 aa37.6■■■■□ 3.61
TDP1-216ENST00000556867 EFCAB5A4FU69 1503 aa37.6■■■■□ 3.61
TDP1-216ENST00000556867 ABCC10Q5T3U5 1492 aa37.59■■■■□ 3.61
TDP1-216ENST00000556867 ZCCHC11Q5TAX3 1644 aaKnown RBP37.55■■■■□ 3.6
TDP1-216ENST00000556867 DIP2BQ9P265 1576 aa37.55■■■■□ 3.6
TDP1-216ENST00000556867 RANGAP1P46060 587 aaPredicted RBP37.54■■■■□ 3.6
TDP1-216ENST00000556867 FHOD3Q2V2M9 1422 aa37.5■■■■□ 3.59
TDP1-216ENST00000556867 ASXL2Q76L83 1435 aa37.5■■■■□ 3.59
TDP1-216ENST00000556867 FAM69CQ0P6D2 419 aa37.44■■■■□ 3.58
TDP1-216ENST00000556867 RAPGEF6Q8TEU7 1601 aa37.43■■■■□ 3.58
TDP1-216ENST00000556867 ARHGAP35Q9NRY4 1499 aa37.36■■■■□ 3.57
TDP1-216ENST00000556867 GLI2P10070 1586 aa37.34■■■■□ 3.57
TDP1-216ENST00000556867 WDR7Q9Y4E6 1490 aa37.32■■■■□ 3.56
TDP1-216ENST00000556867 EPRSP07814 1512 aaKnown RBP37.3■■■■□ 3.56
TDP1-216ENST00000556867 ATP10BO94823 1461 aa37.29■■■■□ 3.56
TDP1-216ENST00000556867 NUP153P49790 1475 aaKnown RBP37.27■■■■□ 3.56
TDP1-216ENST00000556867 FMN1Q68DA7 1419 aa37.21■■■■□ 3.55
TDP1-216ENST00000556867 ARID3CA6NKF2 412 aa37.2■■■■□ 3.55
TDP1-216ENST00000556867 TSPOAP1O95153 1857 aa37.2■■■■□ 3.55
TDP1-216ENST00000556867 MAP3K4Q9Y6R4 1608 aa37.16■■■■□ 3.54
TDP1-216ENST00000556867 PPRC1Q5VV67 1664 aaKnown RBP37.12■■■■□ 3.53
TDP1-216ENST00000556867 CLIP1P30622 1438 aa37.1■■■■□ 3.53
TDP1-216ENST00000556867 HECW1Q76N89 1606 aa37.08■■■■□ 3.53
TDP1-216ENST00000556867 CFAP43Q8NDM7 1665 aa37.05■■■■□ 3.52
TDP1-216ENST00000556867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.04■■■■□ 3.52
TDP1-216ENST00000556867 HNRNPUL2Q1KMD3 747 aaKnown RBP37.04■■■■□ 3.52
TDP1-216ENST00000556867 KCNH8Q96L42 1107 aa37.03■■■■□ 3.52
TDP1-216ENST00000556867 CDK13Q14004 1512 aaKnown RBP36.99■■■■□ 3.51
TDP1-216ENST00000556867 TEX14Q8IWB6 1497 aa36.97■■■■□ 3.51
TDP1-216ENST00000556867 CD109Q6YHK3 1445 aa36.95■■■■□ 3.51
TDP1-216ENST00000556867 KDM6BO15054 1643 aa36.95■■■■□ 3.51
TDP1-216ENST00000556867 ABCA9Q8IUA7 1624 aa36.95■■■■□ 3.51
TDP1-216ENST00000556867 PCF11O94913 1555 aaKnown RBP36.94■■■■□ 3.5
TDP1-216ENST00000556867 MAGI3Q5TCQ9 1506 aa36.93■■■■□ 3.5
TDP1-216ENST00000556867 CASKIN1Q8WXD9 1431 aa36.93■■■■□ 3.5
TDP1-216ENST00000556867 CEP162Q5TB80 1403 aa36.92■■■■□ 3.5
TDP1-216ENST00000556867 PLEKHD1A6NEE1 506 aa36.91■■■■□ 3.5
TDP1-216ENST00000556867 ATP1B4Q9UN42 357 aaPredicted RBP36.89■■■■□ 3.5
TDP1-216ENST00000556867 LRRIQ1Q96JM4 1722 aa36.88■■■■□ 3.49
TDP1-216ENST00000556867 LOC105371045A0A1W2PR82 267 aa36.86■■■■□ 3.49
TDP1-216ENST00000556867 FYCO1Q9BQS8 1478 aa36.85■■■■□ 3.49
TDP1-216ENST00000556867 CCDC18Q5T9S5 1454 aa36.8■■■■□ 3.48
TDP1-216ENST00000556867 CDK11AQ9UQ88 783 aaPredicted RBP36.76■■■■□ 3.48
TDP1-216ENST00000556867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.75■■■■□ 3.47
TDP1-216ENST00000556867 COL17A1Q9UMD9 1497 aaPredicted RBP36.73■■■■□ 3.47
TDP1-216ENST00000556867 TTC37Q6PGP7 1564 aa36.71■■■■□ 3.47
TDP1-216ENST00000556867 TROQ12816 1431 aaPredicted RBP36.7■■■■□ 3.47
TDP1-216ENST00000556867 KIF14Q15058 1648 aa36.64■■■■□ 3.46
TDP1-216ENST00000556867 NEO1Q92859 1461 aa36.63■■■■□ 3.45
TDP1-216ENST00000556867 PHLDB1Q86UU1 1377 aa36.63■■■■□ 3.45
TDP1-216ENST00000556867 ARAP3Q8WWN8 1544 aa36.61■■■■□ 3.45
TDP1-216ENST00000556867 CFAP74Q9C0B2 1584 aa36.56■■■■□ 3.44
TDP1-216ENST00000556867 MYO5CQ9NQX4 1742 aa36.54■■■■□ 3.44
TDP1-216ENST00000556867 FANCAO15360 1455 aa36.52■■■■□ 3.44
TDP1-216ENST00000556867 PLCH2O75038 1416 aa36.51■■■■□ 3.44
TDP1-216ENST00000556867 VPS8Q8N3P4 1428 aa36.5■■■■□ 3.43
TDP1-216ENST00000556867 AKNAQ7Z591 1439 aa36.45■■■■□ 3.43
TDP1-216ENST00000556867 FRMPD1Q5SYB0 1578 aa36.39■■■■□ 3.42
TDP1-216ENST00000556867 MTUS2Q5JR59 1369 aa36.37■■■■□ 3.41
TDP1-216ENST00000556867 PREX2Q70Z35 1606 aa36.37■■■■□ 3.41
TDP1-216ENST00000556867 DENND4BO75064 1496 aaPredicted RBP36.36■■■■□ 3.41
TDP1-216ENST00000556867 ARHGAP5Q13017 1502 aa36.35■■■■□ 3.41
TDP1-216ENST00000556867 EHBP1L1Q8N3D4 1523 aa36.35■■■■□ 3.41
TDP1-216ENST00000556867 CDC42BPBQ9Y5S2 1711 aa36.35■■■■□ 3.41
TDP1-216ENST00000556867 RICTORQ6R327 1708 aa36.34■■■■□ 3.41
TDP1-216ENST00000556867 EFCAB2Q5VUJ9 269 aa36.34■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms