RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 JPH4Q96JJ6 628 aa38.11■■■■□ 3.69
PABPN1-206ENST00000556809 KIAA0586Q9BVV6 1533 aa38.11■■■■□ 3.69
PABPN1-206ENST00000556809 PRG4Q92954 1404 aaPredicted RBP38.06■■■■□ 3.68
PABPN1-206ENST00000556809 RAPGEF2Q9Y4G8 1499 aa38.01■■■■□ 3.67
PABPN1-206ENST00000556809 CHIC1Q5VXU3 224 aa37.87■■■■□ 3.65
PABPN1-206ENST00000556809 PRXQ9BXM0 1461 aa37.87■■■■□ 3.65
PABPN1-206ENST00000556809 IQGAP2Q13576 1575 aa37.85■■■■□ 3.65
PABPN1-206ENST00000556809 CSRNP3Q8WYN3 585 aa37.73■■■■□ 3.63
PABPN1-206ENST00000556809 EEA1Q15075 1411 aa37.72■■■■□ 3.63
PABPN1-206ENST00000556809 CTTNBP2Q8WZ74 1663 aa37.69■■■■□ 3.62
PABPN1-206ENST00000556809 UGGT2Q9NYU1 1516 aa37.67■■■■□ 3.62
PABPN1-206ENST00000556809 CARMIL2Q6F5E8 1435 aa37.65■■■■□ 3.62
PABPN1-206ENST00000556809 DISP1Q96F81 1524 aa37.64■■■■□ 3.62
PABPN1-206ENST00000556809 TRHP20396 242 aaPredicted RBP37.61■■■■□ 3.61
PABPN1-206ENST00000556809 TNIKQ9UKE5 1360 aa37.57■■■■□ 3.61
PABPN1-206ENST00000556809 PTPRGP23470 1445 aa37.56■■■■□ 3.6
PABPN1-206ENST00000556809 ADCY10Q96PN6 1610 aa37.55■■■■□ 3.6
PABPN1-206ENST00000556809 KIAA0556O60303 1618 aa37.51■■■■□ 3.6
PABPN1-206ENST00000556809 FAM9AQ8IZU1 332 aaPredicted RBP37.49■■■■□ 3.59
PABPN1-206ENST00000556809 KIF21BO75037 1637 aa37.39■■■■□ 3.58
PABPN1-206ENST00000556809 TTBK1Q5TCY1 1321 aaPredicted RBP37.39■■■■□ 3.58
PABPN1-206ENST00000556809 GOLGA3Q08378 1498 aa37.38■■■■□ 3.57
PABPN1-206ENST00000556809 MAPKBP1O60336 1514 aa37.36■■■■□ 3.57
PABPN1-206ENST00000556809 NPM1P06748 294 aaKnown RBP eCLIP37.35■■■■□ 3.57
PABPN1-206ENST00000556809 UHRF1BP1LA0JNW5 1464 aa37.34■■■■□ 3.57
PABPN1-206ENST00000556809 UACAQ9BZF9 1416 aa37.32■■■■□ 3.56
PABPN1-206ENST00000556809 ABCC2Q92887 1545 aa37.29■■■■□ 3.56
PABPN1-206ENST00000556809 KIF13AQ9H1H9 1805 aa37.29■■■■□ 3.56
PABPN1-206ENST00000556809 SAMD9Q5K651 1589 aa37.22■■■■□ 3.55
PABPN1-206ENST00000556809 ABCC10Q5T3U5 1492 aa37.2■■■■□ 3.55
PABPN1-206ENST00000556809 KDM5BQ9UGL1 1544 aa37.16■■■■□ 3.54
PABPN1-206ENST00000556809 PLB1Q6P1J6 1458 aa37.15■■■■□ 3.54
PABPN1-206ENST00000556809 DIP2BQ9P265 1576 aa37.15■■■■□ 3.54
PABPN1-206ENST00000556809 ABCA8O94911 1581 aa37.13■■■■□ 3.53
PABPN1-206ENST00000556809 P3H3Q8IVL6 736 aa37.09■■■■□ 3.53
PABPN1-206ENST00000556809 FAM69CQ0P6D2 419 aa37.08■■■■□ 3.53
PABPN1-206ENST00000556809 ZCCHC11Q5TAX3 1644 aaKnown RBP37.07■■■■□ 3.53
PABPN1-206ENST00000556809 ASXL2Q76L83 1435 aa37.06■■■■□ 3.52
PABPN1-206ENST00000556809 UBTFP17480 764 aaKnown RBP36.98■■■■□ 3.51
PABPN1-206ENST00000556809 EHMT2Q96KQ7 1210 aa36.98■■■■□ 3.51
PABPN1-206ENST00000556809 RANGAP1P46060 587 aaPredicted RBP36.97■■■■□ 3.51
PABPN1-206ENST00000556809 EFCAB5A4FU69 1503 aa36.96■■■■□ 3.51
PABPN1-206ENST00000556809 FHOD3Q2V2M9 1422 aa36.93■■■■□ 3.5
PABPN1-206ENST00000556809 GLI2P10070 1586 aa36.91■■■■□ 3.5
PABPN1-206ENST00000556809 RAPGEF6Q8TEU7 1601 aa36.87■■■■□ 3.49
PABPN1-206ENST00000556809 EPRSP07814 1512 aaKnown RBP36.86■■■■□ 3.49
PABPN1-206ENST00000556809 WDR7Q9Y4E6 1490 aa36.84■■■■□ 3.49
PABPN1-206ENST00000556809 TSPOAP1O95153 1857 aa36.82■■■■□ 3.48
PABPN1-206ENST00000556809 ATP10BO94823 1461 aa36.82■■■■□ 3.48
PABPN1-206ENST00000556809 ARHGAP35Q9NRY4 1499 aa36.78■■■■□ 3.48
PABPN1-206ENST00000556809 NUP153P49790 1475 aaKnown RBP36.75■■■■□ 3.47
PABPN1-206ENST00000556809 MAP3K4Q9Y6R4 1608 aa36.74■■■■□ 3.47
PABPN1-206ENST00000556809 PPRC1Q5VV67 1664 aaKnown RBP36.74■■■■□ 3.47
PABPN1-206ENST00000556809 ARID3CA6NKF2 412 aa36.71■■■■□ 3.47
PABPN1-206ENST00000556809 KCNH8Q96L42 1107 aa36.61■■■■□ 3.45
PABPN1-206ENST00000556809 FMN1Q68DA7 1419 aa36.6■■■■□ 3.45
PABPN1-206ENST00000556809 CFAP43Q8NDM7 1665 aa36.59■■■■□ 3.45
PABPN1-206ENST00000556809 KDM6BO15054 1643 aa36.56■■■■□ 3.44
PABPN1-206ENST00000556809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.52■■■■□ 3.44
PABPN1-206ENST00000556809 HNRNPUL2Q1KMD3 747 aaKnown RBP36.52■■■■□ 3.44
PABPN1-206ENST00000556809 CD109Q6YHK3 1445 aa36.51■■■■□ 3.43
PABPN1-206ENST00000556809 TEX14Q8IWB6 1497 aa36.5■■■■□ 3.43
PABPN1-206ENST00000556809 MAGI3Q5TCQ9 1506 aa36.49■■■■□ 3.43
PABPN1-206ENST00000556809 HECW1Q76N89 1606 aa36.47■■■■□ 3.43
PABPN1-206ENST00000556809 ABCA9Q8IUA7 1624 aa36.47■■■■□ 3.43
PABPN1-206ENST00000556809 CDK13Q14004 1512 aaKnown RBP36.44■■■■□ 3.42
PABPN1-206ENST00000556809 CLIP1P30622 1438 aa36.43■■■■□ 3.42
PABPN1-206ENST00000556809 PLEKHD1A6NEE1 506 aa36.41■■■■□ 3.42
PABPN1-206ENST00000556809 COL17A1Q9UMD9 1497 aaPredicted RBP36.41■■■■□ 3.42
PABPN1-206ENST00000556809 LRRIQ1Q96JM4 1722 aa36.37■■■■□ 3.41
PABPN1-206ENST00000556809 ATP1B4Q9UN42 357 aaPredicted RBP36.33■■■■□ 3.41
PABPN1-206ENST00000556809 CASKIN1Q8WXD9 1431 aa36.33■■■■□ 3.41
PABPN1-206ENST00000556809 PCF11O94913 1555 aaKnown RBP36.32■■■■□ 3.4
PABPN1-206ENST00000556809 LOC105371045A0A1W2PR82 267 aa36.31■■■■□ 3.4
PABPN1-206ENST00000556809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.26■■■■□ 3.4
PABPN1-206ENST00000556809 CEP162Q5TB80 1403 aa36.22■■■■□ 3.39
PABPN1-206ENST00000556809 FYCO1Q9BQS8 1478 aa36.21■■■■□ 3.39
PABPN1-206ENST00000556809 TTC37Q6PGP7 1564 aa36.2■■■■□ 3.39
PABPN1-206ENST00000556809 ARAP3Q8WWN8 1544 aa36.19■■■■□ 3.38
PABPN1-206ENST00000556809 CDK11AQ9UQ88 783 aaPredicted RBP36.19■■■■□ 3.38
PABPN1-206ENST00000556809 CCDC18Q5T9S5 1454 aa36.18■■■■□ 3.38
PABPN1-206ENST00000556809 NEO1Q92859 1461 aa36.18■■■■□ 3.38
PABPN1-206ENST00000556809 PHLDB1Q86UU1 1377 aa36.17■■■■□ 3.38
PABPN1-206ENST00000556809 TROQ12816 1431 aaPredicted RBP36.14■■■■□ 3.38
PABPN1-206ENST00000556809 KIF14Q15058 1648 aa36.1■■■■□ 3.37
PABPN1-206ENST00000556809 PLCH2O75038 1416 aa36.04■■■■□ 3.36
PABPN1-206ENST00000556809 FANCAO15360 1455 aa36.04■■■■□ 3.36
PABPN1-206ENST00000556809 CFAP74Q9C0B2 1584 aa36.02■■■■□ 3.36
PABPN1-206ENST00000556809 MYO5CQ9NQX4 1742 aa36■■■■□ 3.35
PABPN1-206ENST00000556809 AKNAQ7Z591 1439 aa36■■■■□ 3.35
PABPN1-206ENST00000556809 FRMPD1Q5SYB0 1578 aa35.96■■■■□ 3.35
PABPN1-206ENST00000556809 RAPGEF3O95398 923 aa35.94■■■■□ 3.34
PABPN1-206ENST00000556809 RICTORQ6R327 1708 aa35.9■■■■□ 3.34
PABPN1-206ENST00000556809 DENND4BO75064 1496 aaPredicted RBP35.88■■■■□ 3.33
PABPN1-206ENST00000556809 KDM4FA0A1W2PPD8 638 aa35.88■■■■□ 3.33
PABPN1-206ENST00000556809 CDC42BPBQ9Y5S2 1711 aa35.86■■■■□ 3.33
PABPN1-206ENST00000556809 EFCAB2Q5VUJ9 269 aa35.85■■■■□ 3.33
PABPN1-206ENST00000556809 AEBP2Q6ZN18 517 aaPredicted RBP35.83■■■■□ 3.33
PABPN1-206ENST00000556809 ADGRL1O94910 1474 aa35.83■■■■□ 3.33
PABPN1-206ENST00000556809 PREX2Q70Z35 1606 aa35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms