RNA–Protein interactions for RNA: ENST00000556616.5

PRMT5-223, Transcript of protein arginine methyltransferase 5, human

TSL 4

Gene PRMT5, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRMT5-223	ENST00000556616	CC2D2A	Q9P2K1	1620 aa		12.37	□□□□□ -0.43
PRMT5-223	ENST00000556616	SPDYE2B	A6NHP3	402 aa		12.36	□□□□□ -0.43
PRMT5-223	ENST00000556616	SPDYE6	P0CI01	402 aa		12.36	□□□□□ -0.43
PRMT5-223	ENST00000556616	SPDYE2	Q495Y8	402 aa		12.36	□□□□□ -0.43
PRMT5-223	ENST00000556616	SSUH2	Q9Y2M2	353 aa		12.36	□□□□□ -0.43
PRMT5-223	ENST00000556616	PLCD3	Q8N3E9	789 aa		12.33	□□□□□ -0.44
PRMT5-223	ENST00000556616	DSG3	P32926	999 aa		12.32	□□□□□ -0.44
PRMT5-223	ENST00000556616	KDM2A	Q9Y2K7	1162 aa		12.32	□□□□□ -0.44
PRMT5-223	ENST00000556616	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.31	□□□□□ -0.44
PRMT5-223	ENST00000556616	RGL2	O15211	777 aa		12.29	□□□□□ -0.44
PRMT5-223	ENST00000556616	OSCAR	Q8IYS5	282 aa		12.29	□□□□□ -0.44
PRMT5-223	ENST00000556616	TAOK2	Q9UL54	1235 aa		12.29	□□□□□ -0.44
PRMT5-223	ENST00000556616	MIER1	Q8N108	512 aa		12.28	□□□□□ -0.44
PRMT5-223	ENST00000556616	PRKCSH	P14314	528 aa	Predicted RBP	12.27	□□□□□ -0.45
PRMT5-223	ENST00000556616	CFTR	P13569	1480 aa		12.26	□□□□□ -0.45
PRMT5-223	ENST00000556616	CFAP44	Q96MT7	982 aa		12.25	□□□□□ -0.45
PRMT5-223	ENST00000556616	TRIM41	Q8WV44	630 aa		12.24	□□□□□ -0.45
PRMT5-223	ENST00000556616	ABCC8	Q09428	1581 aa		12.23	□□□□□ -0.45
PRMT5-223	ENST00000556616	SPRYD3	Q8NCJ5	442 aa		12.21	□□□□□ -0.45
PRMT5-223	ENST00000556616	PRDM2	Q13029	1718 aa		12.19	□□□□□ -0.46
PRMT5-223	ENST00000556616	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.19	□□□□□ -0.46
PRMT5-223	ENST00000556616	CADPS	Q9ULU8	1353 aa		12.17	□□□□□ -0.46
PRMT5-223	ENST00000556616	SYNJ1	O43426	1573 aa		12.15	□□□□□ -0.46
PRMT5-223	ENST00000556616	TSHZ2	Q9NRE2	1034 aa		12.15	□□□□□ -0.46
PRMT5-223	ENST00000556616	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.15	□□□□□ -0.46
PRMT5-223	ENST00000556616	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.15	□□□□□ -0.46
PRMT5-223	ENST00000556616	BIVM-ERCC5	R4GMW8	1640 aa		12.14	□□□□□ -0.47
PRMT5-223	ENST00000556616	TOP2B	Q02880	1626 aa		12.13	□□□□□ -0.47
PRMT5-223	ENST00000556616	PLEKHG5	O94827	1062 aa		12.12	□□□□□ -0.47
PRMT5-223	ENST00000556616	CHGA	P10645	457 aa	Known RBP	12.12	□□□□□ -0.47
PRMT5-223	ENST00000556616	EEA1	Q15075	1411 aa		12.1	□□□□□ -0.47
PRMT5-223	ENST00000556616	TPRN	Q4KMQ1	711 aa		12.08	□□□□□ -0.48
PRMT5-223	ENST00000556616	LAMC3	Q9Y6N6	1575 aa		12.08	□□□□□ -0.48
PRMT5-223	ENST00000556616	CUX1	P39880	1505 aa		12.06	□□□□□ -0.48
PRMT5-223	ENST00000556616	SOGA1	O94964	1423 aa		12.03	□□□□□ -0.48
PRMT5-223	ENST00000556616	POTED	Q86YR6	584 aa		12.02	□□□□□ -0.49
PRMT5-223	ENST00000556616	HS6ST3	Q8IZP7	471 aa		12.02	□□□□□ -0.49
PRMT5-223	ENST00000556616	DNAJC5	Q9H3Z4	198 aa		12.02	□□□□□ -0.49
PRMT5-223	ENST00000556616	FANCD2	Q9BXW9	1451 aa		12.01	□□□□□ -0.49
PRMT5-223	ENST00000556616	LOC105371045	A0A1W2PR82	267 aa		12	□□□□□ -0.49
PRMT5-223	ENST00000556616	NES	P48681	1621 aa		11.99	□□□□□ -0.49
PRMT5-223	ENST00000556616	RUSC2	Q8N2Y8	1516 aa		11.98	□□□□□ -0.49
PRMT5-223	ENST00000556616	GSE1	Q14687	1217 aa		11.97	□□□□□ -0.49
PRMT5-223	ENST00000556616	RNF25	Q96BH1	459 aa	Predicted RBP	11.95	□□□□□ -0.5
PRMT5-223	ENST00000556616	DNMBP	Q6XZF7	1577 aa		11.95	□□□□□ -0.5
PRMT5-223	ENST00000556616	NUBP1	P53384	320 aa		11.94	□□□□□ -0.5
PRMT5-223	ENST00000556616	KIF21B	O75037	1637 aa		11.93	□□□□□ -0.5
PRMT5-223	ENST00000556616	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.93	□□□□□ -0.5
PRMT5-223	ENST00000556616	CEP164	Q9UPV0	1460 aa		11.93	□□□□□ -0.5
PRMT5-223	ENST00000556616	PDS5B	Q9NTI5	1447 aa		11.93	□□□□□ -0.5
PRMT5-223	ENST00000556616	TOPBP1	Q92547	1522 aa		11.91	□□□□□ -0.5
PRMT5-223	ENST00000556616	FGD5	Q6ZNL6	1462 aa		11.9	□□□□□ -0.5
PRMT5-223	ENST00000556616	URB2	Q14146	1524 aa	Known RBP	11.88	□□□□□ -0.51
PRMT5-223	ENST00000556616	GOLGA3	Q08378	1498 aa		11.88	□□□□□ -0.51
PRMT5-223	ENST00000556616	KIF27	Q86VH2	1401 aa		11.87	□□□□□ -0.51
PRMT5-223	ENST00000556616	TNIK	Q9UKE5	1360 aa		11.87	□□□□□ -0.51
PRMT5-223	ENST00000556616	PRX	Q9BXM0	1461 aa		11.87	□□□□□ -0.51
PRMT5-223	ENST00000556616	KIF21A	Q7Z4S6	1674 aa		11.87	□□□□□ -0.51
PRMT5-223	ENST00000556616	RIOK3	O14730	519 aa	Known RBP	11.86	□□□□□ -0.51
PRMT5-223	ENST00000556616	NKX1-1	Q15270	411 aa	Predicted RBP	11.86	□□□□□ -0.51
PRMT5-223	ENST00000556616	POLA1	P09884	1462 aa	Predicted RBP	11.86	□□□□□ -0.51
PRMT5-223	ENST00000556616	ERICH3	Q5RHP9	1530 aa		11.86	□□□□□ -0.51
PRMT5-223	ENST00000556616	DCAF8	Q5TAQ9	597 aa		11.85	□□□□□ -0.51
PRMT5-223	ENST00000556616	ABCA10	Q8WWZ4	1543 aa		11.85	□□□□□ -0.51
PRMT5-223	ENST00000556616	NBR1	Q14596	966 aa		11.84	□□□□□ -0.51
PRMT5-223	ENST00000556616	WDR97	A6NE52	1622 aa		11.83	□□□□□ -0.52
PRMT5-223	ENST00000556616	GTPBP6	O43824	516 aa	Predicted RBP	11.83	□□□□□ -0.52
PRMT5-223	ENST00000556616	CUX2	O14529	1486 aa		11.81	□□□□□ -0.52
PRMT5-223	ENST00000556616	CHRM1	P11229	460 aa	Predicted RBP	11.8	□□□□□ -0.52
PRMT5-223	ENST00000556616	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.8	□□□□□ -0.52
PRMT5-223	ENST00000556616	MRC2	Q9UBG0	1479 aa		11.8	□□□□□ -0.52
PRMT5-223	ENST00000556616	RAPGEF2	Q9Y4G8	1499 aa		11.79	□□□□□ -0.52
PRMT5-223	ENST00000556616	WDR62	O43379	1518 aa		11.78	□□□□□ -0.52
PRMT5-223	ENST00000556616	IGF1R	P08069	1367 aa		11.78	□□□□□ -0.52
PRMT5-223	ENST00000556616	VGF	O15240	615 aa	Predicted RBP	11.77	□□□□□ -0.53
PRMT5-223	ENST00000556616	MNX1	P50219	401 aa	Predicted RBP	11.77	□□□□□ -0.53
PRMT5-223	ENST00000556616	CREBZF	Q9NS37	354 aa		11.77	□□□□□ -0.53
PRMT5-223	ENST00000556616	CEP162	Q5TB80	1403 aa		11.77	□□□□□ -0.53
PRMT5-223	ENST00000556616	RAD54L2	Q9Y4B4	1467 aa		11.76	□□□□□ -0.53
PRMT5-223	ENST00000556616	TARBP1	Q13395	1621 aa	Known RBP	11.76	□□□□□ -0.53
PRMT5-223	ENST00000556616	ABCA5	Q8WWZ7	1642 aa		11.76	□□□□□ -0.53
PRMT5-223	ENST00000556616	FAM212A	Q96EL1	285 aa		11.75	□□□□□ -0.53
PRMT5-223	ENST00000556616	SGIP1	Q9BQI5	828 aa		11.75	□□□□□ -0.53
PRMT5-223	ENST00000556616	STK25	O00506	426 aa		11.74	□□□□□ -0.53
PRMT5-223	ENST00000556616	CACNB1	Q02641	598 aa	Predicted RBP	11.74	□□□□□ -0.53
PRMT5-223	ENST00000556616	AKT1S1	Q96B36	256 aa		11.74	□□□□□ -0.53
PRMT5-223	ENST00000556616	THOC2	Q8NI27	1593 aa	Known RBP	11.72	□□□□□ -0.53
PRMT5-223	ENST00000556616	PRR29	P0C7W0	189 aa		11.71	□□□□□ -0.53
PRMT5-223	ENST00000556616	CUL7	Q14999	1698 aa		11.71	□□□□□ -0.54
PRMT5-223	ENST00000556616	CARMIL1	Q5VZK9	1371 aa		11.68	□□□□□ -0.54
PRMT5-223	ENST00000556616	RASEF	Q8IZ41	740 aa		11.68	□□□□□ -0.54
PRMT5-223	ENST00000556616	UBTF	P17480	764 aa	Known RBP	11.67	□□□□□ -0.54
PRMT5-223	ENST00000556616	RBM42	Q9BTD8	480 aa	Known RBP	11.67	□□□□□ -0.54
PRMT5-223	ENST00000556616	CLEC11A	Q9Y240	323 aa		11.67	□□□□□ -0.54
PRMT5-223	ENST00000556616	IFT140	Q96RY7	1462 aa		11.67	□□□□□ -0.54
PRMT5-223	ENST00000556616	GAPVD1	Q14C86	1478 aa		11.66	□□□□□ -0.54
PRMT5-223	ENST00000556616	CLIP1	P30622	1438 aa		11.66	□□□□□ -0.54
PRMT5-223	ENST00000556616	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.65	□□□□□ -0.54
PRMT5-223	ENST00000556616	ZFP91	Q96JP5	570 aa	Predicted RBP	11.65	□□□□□ -0.54
PRMT5-223	ENST00000556616	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms