RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 IGF1RP08069 1367 aa18.23■□□□□ 0.51
SPTLC2-205ENST00000556607 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
SPTLC2-205ENST00000556607 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
SPTLC2-205ENST00000556607 KIAA0586Q9BVV6 1533 aa18.13■□□□□ 0.49
SPTLC2-205ENST00000556607 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.49
SPTLC2-205ENST00000556607 TTBK1Q5TCY1 1321 aaPredicted RBP18.09■□□□□ 0.49
SPTLC2-205ENST00000556607 IQGAP2Q13576 1575 aa18.03■□□□□ 0.48
SPTLC2-205ENST00000556607 KIF13AQ9H1H9 1805 aa18.02■□□□□ 0.48
SPTLC2-205ENST00000556607 ADCY10Q96PN6 1610 aa18.01■□□□□ 0.47
SPTLC2-205ENST00000556607 CARMIL2Q6F5E8 1435 aa18.01■□□□□ 0.47
SPTLC2-205ENST00000556607 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
SPTLC2-205ENST00000556607 PTPRGP23470 1445 aa17.98■□□□□ 0.47
SPTLC2-205ENST00000556607 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
SPTLC2-205ENST00000556607 TNIKQ9UKE5 1360 aa17.95■□□□□ 0.46
SPTLC2-205ENST00000556607 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
SPTLC2-205ENST00000556607 CTTNBP2Q8WZ74 1663 aa17.92■□□□□ 0.46
SPTLC2-205ENST00000556607 ABCC10Q5T3U5 1492 aa17.91■□□□□ 0.46
SPTLC2-205ENST00000556607 TSPOAP1O95153 1857 aa17.89■□□□□ 0.45
SPTLC2-205ENST00000556607 DIP2BQ9P265 1576 aa17.89■□□□□ 0.45
SPTLC2-205ENST00000556607 DISP1Q96F81 1524 aa17.88■□□□□ 0.45
SPTLC2-205ENST00000556607 AEBP2Q6ZN18 517 aaPredicted RBP17.86■□□□□ 0.45
SPTLC2-205ENST00000556607 UGGT2Q9NYU1 1516 aa17.86■□□□□ 0.45
SPTLC2-205ENST00000556607 KIAA0556O60303 1618 aa17.85■□□□□ 0.45
SPTLC2-205ENST00000556607 UACAQ9BZF9 1416 aa17.84■□□□□ 0.45
SPTLC2-205ENST00000556607 ABCC2Q92887 1545 aa17.83■□□□□ 0.45
SPTLC2-205ENST00000556607 UHRF1BP1LA0JNW5 1464 aa17.79■□□□□ 0.44
SPTLC2-205ENST00000556607 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
SPTLC2-205ENST00000556607 ASXL2Q76L83 1435 aa17.79■□□□□ 0.44
SPTLC2-205ENST00000556607 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
SPTLC2-205ENST00000556607 ZCCHC11Q5TAX3 1644 aaKnown RBP17.76■□□□□ 0.43
SPTLC2-205ENST00000556607 PLB1Q6P1J6 1458 aa17.76■□□□□ 0.43
SPTLC2-205ENST00000556607 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
SPTLC2-205ENST00000556607 KDM6BO15054 1643 aa17.76■□□□□ 0.43
SPTLC2-205ENST00000556607 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
SPTLC2-205ENST00000556607 P3H3Q8IVL6 736 aa17.72■□□□□ 0.43
SPTLC2-205ENST00000556607 KDM5BQ9UGL1 1544 aa17.72■□□□□ 0.43
SPTLC2-205ENST00000556607 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
SPTLC2-205ENST00000556607 GLI2P10070 1586 aa17.69■□□□□ 0.42
SPTLC2-205ENST00000556607 EEA1Q15075 1411 aa17.67■□□□□ 0.42
SPTLC2-205ENST00000556607 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
SPTLC2-205ENST00000556607 PPRC1Q5VV67 1664 aaKnown RBP17.66■□□□□ 0.42
SPTLC2-205ENST00000556607 ABCA8O94911 1581 aa17.65■□□□□ 0.42
SPTLC2-205ENST00000556607 ARID3CA6NKF2 412 aa17.64■□□□□ 0.41
SPTLC2-205ENST00000556607 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
SPTLC2-205ENST00000556607 MAP3K4Q9Y6R4 1608 aa17.63■□□□□ 0.41
SPTLC2-205ENST00000556607 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
SPTLC2-205ENST00000556607 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
SPTLC2-205ENST00000556607 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
SPTLC2-205ENST00000556607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.4
SPTLC2-205ENST00000556607 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.4
SPTLC2-205ENST00000556607 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
SPTLC2-205ENST00000556607 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
SPTLC2-205ENST00000556607 RAPGEF6Q8TEU7 1601 aa17.54■□□□□ 0.4
SPTLC2-205ENST00000556607 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
SPTLC2-205ENST00000556607 KIF21BO75037 1637 aa17.54■□□□□ 0.4
SPTLC2-205ENST00000556607 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
SPTLC2-205ENST00000556607 ATP10BO94823 1461 aa17.51■□□□□ 0.39
SPTLC2-205ENST00000556607 UBTFP17480 764 aaKnown RBP17.51■□□□□ 0.39
SPTLC2-205ENST00000556607 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
SPTLC2-205ENST00000556607 COL17A1Q9UMD9 1497 aaPredicted RBP17.49■□□□□ 0.39
SPTLC2-205ENST00000556607 KDM4FA0A1W2PPD8 638 aa17.46■□□□□ 0.39
SPTLC2-205ENST00000556607 MAGI3Q5TCQ9 1506 aa17.46■□□□□ 0.39
SPTLC2-205ENST00000556607 EFCAB5A4FU69 1503 aa17.44■□□□□ 0.38
SPTLC2-205ENST00000556607 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
SPTLC2-205ENST00000556607 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
SPTLC2-205ENST00000556607 ABCA9Q8IUA7 1624 aa17.4■□□□□ 0.38
SPTLC2-205ENST00000556607 PLEKHD1A6NEE1 506 aa17.4■□□□□ 0.38
SPTLC2-205ENST00000556607 ADGRL1O94910 1474 aa17.38■□□□□ 0.37
SPTLC2-205ENST00000556607 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
SPTLC2-205ENST00000556607 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
SPTLC2-205ENST00000556607 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
SPTLC2-205ENST00000556607 PHLDB1Q86UU1 1377 aa17.3■□□□□ 0.36
SPTLC2-205ENST00000556607 ARHGAP35Q9NRY4 1499 aa17.3■□□□□ 0.36
SPTLC2-205ENST00000556607 HECW1Q76N89 1606 aa17.29■□□□□ 0.36
SPTLC2-205ENST00000556607 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
SPTLC2-205ENST00000556607 NEO1Q92859 1461 aa17.29■□□□□ 0.36
SPTLC2-205ENST00000556607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPTLC2-205ENST00000556607 TTC37Q6PGP7 1564 aa17.24■□□□□ 0.35
SPTLC2-205ENST00000556607 CFAP74Q9C0B2 1584 aa17.24■□□□□ 0.35
SPTLC2-205ENST00000556607 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
SPTLC2-205ENST00000556607 FANCAO15360 1455 aa17.23■□□□□ 0.35
SPTLC2-205ENST00000556607 AKNAQ7Z591 1439 aa17.21■□□□□ 0.35
SPTLC2-205ENST00000556607 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.34
SPTLC2-205ENST00000556607 DENND4BO75064 1496 aaPredicted RBP17.2■□□□□ 0.34
SPTLC2-205ENST00000556607 FRMPD1Q5SYB0 1578 aa17.19■□□□□ 0.34
SPTLC2-205ENST00000556607 LRRIQ1Q96JM4 1722 aa17.18■□□□□ 0.34
SPTLC2-205ENST00000556607 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
SPTLC2-205ENST00000556607 RICTORQ6R327 1708 aa17.18■□□□□ 0.34
SPTLC2-205ENST00000556607 KIF14Q15058 1648 aa17.17■□□□□ 0.34
SPTLC2-205ENST00000556607 CLIP1P30622 1438 aa17.16■□□□□ 0.34
SPTLC2-205ENST00000556607 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
SPTLC2-205ENST00000556607 PLCH2O75038 1416 aa17.14■□□□□ 0.33
SPTLC2-205ENST00000556607 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
SPTLC2-205ENST00000556607 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
SPTLC2-205ENST00000556607 SCAPERQ9BY12 1400 aa17.12■□□□□ 0.33
SPTLC2-205ENST00000556607 ARHGEF40Q8TER5 1519 aa17.11■□□□□ 0.33
SPTLC2-205ENST00000556607 HECW2Q9P2P5 1572 aa17.11■□□□□ 0.33
SPTLC2-205ENST00000556607 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
SPTLC2-205ENST00000556607 ARHGAP5Q13017 1502 aa17.11■□□□□ 0.33
SPTLC2-205ENST00000556607 MYT1LQ9UL68 1186 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms