RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 KIAA0586Q9BVV6 1533 aa29.81■■■□□ 2.36
TUBB3-212ENST00000556565 PRG4Q92954 1404 aaPredicted RBP29.78■■■□□ 2.36
TUBB3-212ENST00000556565 JPH4Q96JJ6 628 aa29.77■■■□□ 2.36
TUBB3-212ENST00000556565 RAPGEF2Q9Y4G8 1499 aa29.75■■■□□ 2.35
TUBB3-212ENST00000556565 IQGAP2Q13576 1575 aa29.64■■■□□ 2.33
TUBB3-212ENST00000556565 PRXQ9BXM0 1461 aa29.63■■■□□ 2.33
TUBB3-212ENST00000556565 EEA1Q15075 1411 aa29.57■■■□□ 2.32
TUBB3-212ENST00000556565 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
TUBB3-212ENST00000556565 CSRNP3Q8WYN3 585 aa29.51■■■□□ 2.31
TUBB3-212ENST00000556565 CARMIL2Q6F5E8 1435 aa29.48■■■□□ 2.31
TUBB3-212ENST00000556565 CTTNBP2Q8WZ74 1663 aa29.48■■■□□ 2.31
TUBB3-212ENST00000556565 UGGT2Q9NYU1 1516 aa29.47■■■□□ 2.31
TUBB3-212ENST00000556565 DISP1Q96F81 1524 aa29.44■■■□□ 2.3
TUBB3-212ENST00000556565 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
TUBB3-212ENST00000556565 TNIKQ9UKE5 1360 aa29.39■■■□□ 2.3
TUBB3-212ENST00000556565 PTPRGP23470 1445 aa29.39■■■□□ 2.3
TUBB3-212ENST00000556565 FAM9AQ8IZU1 332 aaPredicted RBP29.39■■■□□ 2.3
TUBB3-212ENST00000556565 KIAA0556O60303 1618 aa29.37■■■□□ 2.29
TUBB3-212ENST00000556565 ADCY10Q96PN6 1610 aa29.37■■■□□ 2.29
TUBB3-212ENST00000556565 TTBK1Q5TCY1 1321 aaPredicted RBP29.3■■■□□ 2.28
TUBB3-212ENST00000556565 KIF21BO75037 1637 aa29.29■■■□□ 2.28
TUBB3-212ENST00000556565 GOLGA3Q08378 1498 aa29.28■■■□□ 2.28
TUBB3-212ENST00000556565 NPM1P06748 294 aaKnown RBP eCLIP29.22■■■□□ 2.27
TUBB3-212ENST00000556565 MAPKBP1O60336 1514 aa29.21■■■□□ 2.27
TUBB3-212ENST00000556565 UHRF1BP1LA0JNW5 1464 aa29.2■■■□□ 2.26
TUBB3-212ENST00000556565 UACAQ9BZF9 1416 aa29.2■■■□□ 2.26
TUBB3-212ENST00000556565 ABCC2Q92887 1545 aa29.18■■■□□ 2.26
TUBB3-212ENST00000556565 SAMD9Q5K651 1589 aa29.13■■■□□ 2.25
TUBB3-212ENST00000556565 KIF13AQ9H1H9 1805 aa29.08■■■□□ 2.25
TUBB3-212ENST00000556565 PLB1Q6P1J6 1458 aa29.08■■■□□ 2.25
TUBB3-212ENST00000556565 ABCC10Q5T3U5 1492 aa29.07■■■□□ 2.24
TUBB3-212ENST00000556565 KDM5BQ9UGL1 1544 aa29.05■■■□□ 2.24
TUBB3-212ENST00000556565 ABCA8O94911 1581 aa29.05■■■□□ 2.24
TUBB3-212ENST00000556565 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
TUBB3-212ENST00000556565 P3H3Q8IVL6 736 aa29.03■■■□□ 2.24
TUBB3-212ENST00000556565 EHMT2Q96KQ7 1210 aa29.01■■■□□ 2.23
TUBB3-212ENST00000556565 ASXL2Q76L83 1435 aa29■■■□□ 2.23
TUBB3-212ENST00000556565 ZCCHC11Q5TAX3 1644 aaKnown RBP28.99■■■□□ 2.23
TUBB3-212ENST00000556565 RANGAP1P46060 587 aaPredicted RBP28.99■■■□□ 2.23
TUBB3-212ENST00000556565 UBTFP17480 764 aaKnown RBP28.98■■■□□ 2.23
TUBB3-212ENST00000556565 FAM69CQ0P6D2 419 aa28.98■■■□□ 2.23
TUBB3-212ENST00000556565 EFCAB5A4FU69 1503 aa28.97■■■□□ 2.23
TUBB3-212ENST00000556565 FHOD3Q2V2M9 1422 aa28.94■■■□□ 2.22
TUBB3-212ENST00000556565 RAPGEF6Q8TEU7 1601 aa28.86■■■□□ 2.21
TUBB3-212ENST00000556565 GLI2P10070 1586 aa28.84■■■□□ 2.21
TUBB3-212ENST00000556565 WDR7Q9Y4E6 1490 aa28.84■■■□□ 2.21
TUBB3-212ENST00000556565 EPRSP07814 1512 aaKnown RBP28.83■■■□□ 2.21
TUBB3-212ENST00000556565 ARHGAP35Q9NRY4 1499 aa28.79■■■□□ 2.2
TUBB3-212ENST00000556565 ATP10BO94823 1461 aa28.78■■■□□ 2.2
TUBB3-212ENST00000556565 ARID3CA6NKF2 412 aa28.77■■■□□ 2.2
TUBB3-212ENST00000556565 NUP153P49790 1475 aaKnown RBP28.77■■■□□ 2.2
TUBB3-212ENST00000556565 TSPOAP1O95153 1857 aa28.74■■■□□ 2.19
TUBB3-212ENST00000556565 MAP3K4Q9Y6R4 1608 aa28.72■■■□□ 2.19
TUBB3-212ENST00000556565 PPRC1Q5VV67 1664 aaKnown RBP28.69■■■□□ 2.18
TUBB3-212ENST00000556565 FMN1Q68DA7 1419 aa28.68■■■□□ 2.18
TUBB3-212ENST00000556565 KCNH8Q96L42 1107 aa28.62■■■□□ 2.17
TUBB3-212ENST00000556565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
TUBB3-212ENST00000556565 HNRNPUL2Q1KMD3 747 aaKnown RBP28.61■■■□□ 2.17
TUBB3-212ENST00000556565 KDM6BO15054 1643 aa28.61■■■□□ 2.17
TUBB3-212ENST00000556565 CFAP43Q8NDM7 1665 aa28.6■■■□□ 2.17
TUBB3-212ENST00000556565 HECW1Q76N89 1606 aa28.58■■■□□ 2.17
TUBB3-212ENST00000556565 TEX14Q8IWB6 1497 aa28.58■■■□□ 2.17
TUBB3-212ENST00000556565 CLIP1P30622 1438 aa28.57■■■□□ 2.16
TUBB3-212ENST00000556565 CDK13Q14004 1512 aaKnown RBP28.55■■■□□ 2.16
TUBB3-212ENST00000556565 CD109Q6YHK3 1445 aa28.55■■■□□ 2.16
TUBB3-212ENST00000556565 MAGI3Q5TCQ9 1506 aa28.53■■■□□ 2.16
TUBB3-212ENST00000556565 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
TUBB3-212ENST00000556565 PLEKHD1A6NEE1 506 aa28.48■■■□□ 2.15
TUBB3-212ENST00000556565 ATP1B4Q9UN42 357 aaPredicted RBP28.48■■■□□ 2.15
TUBB3-212ENST00000556565 PCF11O94913 1555 aaKnown RBP28.48■■■□□ 2.15
TUBB3-212ENST00000556565 CASKIN1Q8WXD9 1431 aa28.44■■■□□ 2.14
TUBB3-212ENST00000556565 COL17A1Q9UMD9 1497 aaPredicted RBP28.43■■■□□ 2.14
TUBB3-212ENST00000556565 CEP162Q5TB80 1403 aa28.41■■■□□ 2.14
TUBB3-212ENST00000556565 LRRIQ1Q96JM4 1722 aa28.4■■■□□ 2.14
TUBB3-212ENST00000556565 FYCO1Q9BQS8 1478 aa28.39■■■□□ 2.13
TUBB3-212ENST00000556565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.36■■■□□ 2.13
TUBB3-212ENST00000556565 CCDC18Q5T9S5 1454 aa28.35■■■□□ 2.13
TUBB3-212ENST00000556565 TTC37Q6PGP7 1564 aa28.35■■■□□ 2.13
TUBB3-212ENST00000556565 CDK11AQ9UQ88 783 aaPredicted RBP28.34■■■□□ 2.13
TUBB3-212ENST00000556565 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
TUBB3-212ENST00000556565 TROQ12816 1431 aaPredicted RBP28.31■■■□□ 2.12
TUBB3-212ENST00000556565 NEO1Q92859 1461 aa28.3■■■□□ 2.12
TUBB3-212ENST00000556565 ARAP3Q8WWN8 1544 aa28.28■■■□□ 2.12
TUBB3-212ENST00000556565 PHLDB1Q86UU1 1377 aa28.27■■■□□ 2.12
TUBB3-212ENST00000556565 KIF14Q15058 1648 aa28.27■■■□□ 2.12
TUBB3-212ENST00000556565 FANCAO15360 1455 aa28.21■■■□□ 2.11
TUBB3-212ENST00000556565 CFAP74Q9C0B2 1584 aa28.21■■■□□ 2.11
TUBB3-212ENST00000556565 PLCH2O75038 1416 aa28.18■■■□□ 2.1
TUBB3-212ENST00000556565 MYO5CQ9NQX4 1742 aa28.16■■■□□ 2.1
TUBB3-212ENST00000556565 AKNAQ7Z591 1439 aa28.15■■■□□ 2.1
TUBB3-212ENST00000556565 FRMPD1Q5SYB0 1578 aa28.12■■■□□ 2.09
TUBB3-212ENST00000556565 RAPGEF3O95398 923 aa28.1■■■□□ 2.09
TUBB3-212ENST00000556565 DENND4BO75064 1496 aaPredicted RBP28.09■■■□□ 2.09
TUBB3-212ENST00000556565 VPS8Q8N3P4 1428 aa28.08■■■□□ 2.09
TUBB3-212ENST00000556565 ADGRL1O94910 1474 aa28.06■■■□□ 2.08
TUBB3-212ENST00000556565 ARHGAP5Q13017 1502 aa28.06■■■□□ 2.08
TUBB3-212ENST00000556565 RICTORQ6R327 1708 aa28.05■■■□□ 2.08
TUBB3-212ENST00000556565 PREX2Q70Z35 1606 aa28.04■■■□□ 2.08
TUBB3-212ENST00000556565 EFCAB2Q5VUJ9 269 aa28.04■■■□□ 2.08
TUBB3-212ENST00000556565 MTUS2Q5JR59 1369 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms