RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
HNRNPC-225ENST00000556513 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
HNRNPC-225ENST00000556513 CARMIL1Q5VZK9 1371 aa17.55■□□□□ 0.4
HNRNPC-225ENST00000556513 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
HNRNPC-225ENST00000556513 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
HNRNPC-225ENST00000556513 KIAA0586Q9BVV6 1533 aa17.48■□□□□ 0.39
HNRNPC-225ENST00000556513 RAPGEF2Q9Y4G8 1499 aa17.44■□□□□ 0.38
HNRNPC-225ENST00000556513 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
HNRNPC-225ENST00000556513 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
HNRNPC-225ENST00000556513 CTTNBP2Q8WZ74 1663 aa17.39■□□□□ 0.37
HNRNPC-225ENST00000556513 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.37
HNRNPC-225ENST00000556513 PRXQ9BXM0 1461 aa17.32■□□□□ 0.36
HNRNPC-225ENST00000556513 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
HNRNPC-225ENST00000556513 ADCY10Q96PN6 1610 aa17.31■□□□□ 0.36
HNRNPC-225ENST00000556513 EEA1Q15075 1411 aa17.31■□□□□ 0.36
HNRNPC-225ENST00000556513 CARMIL2Q6F5E8 1435 aa17.31■□□□□ 0.36
HNRNPC-225ENST00000556513 DISP1Q96F81 1524 aa17.28■□□□□ 0.36
HNRNPC-225ENST00000556513 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
HNRNPC-225ENST00000556513 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
HNRNPC-225ENST00000556513 UGGT2Q9NYU1 1516 aa17.27■□□□□ 0.36
HNRNPC-225ENST00000556513 PTPRGP23470 1445 aa17.26■□□□□ 0.35
HNRNPC-225ENST00000556513 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
HNRNPC-225ENST00000556513 TNIKQ9UKE5 1360 aa17.25■□□□□ 0.35
HNRNPC-225ENST00000556513 KIF13AQ9H1H9 1805 aa17.25■□□□□ 0.35
HNRNPC-225ENST00000556513 NPM1P06748 294 aaKnown RBP eCLIP17.21■□□□□ 0.35
HNRNPC-225ENST00000556513 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
HNRNPC-225ENST00000556513 GOLGA3Q08378 1498 aa17.16■□□□□ 0.34
HNRNPC-225ENST00000556513 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
HNRNPC-225ENST00000556513 KIF21BO75037 1637 aa17.14■□□□□ 0.33
HNRNPC-225ENST00000556513 ABCC2Q92887 1545 aa17.13■□□□□ 0.33
HNRNPC-225ENST00000556513 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
HNRNPC-225ENST00000556513 DIP2BQ9P265 1576 aa17.12■□□□□ 0.33
HNRNPC-225ENST00000556513 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
HNRNPC-225ENST00000556513 TSPOAP1O95153 1857 aa17.11■□□□□ 0.33
HNRNPC-225ENST00000556513 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
HNRNPC-225ENST00000556513 P3H3Q8IVL6 736 aa17.11■□□□□ 0.33
HNRNPC-225ENST00000556513 ZCCHC11Q5TAX3 1644 aaKnown RBP17.1■□□□□ 0.33
HNRNPC-225ENST00000556513 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
HNRNPC-225ENST00000556513 FAM69CQ0P6D2 419 aa17.1■□□□□ 0.33
HNRNPC-225ENST00000556513 PLB1Q6P1J6 1458 aa17.09■□□□□ 0.33
HNRNPC-225ENST00000556513 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
HNRNPC-225ENST00000556513 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
HNRNPC-225ENST00000556513 ASXL2Q76L83 1435 aa17.05■□□□□ 0.32
HNRNPC-225ENST00000556513 ABCA8O94911 1581 aa17.05■□□□□ 0.32
HNRNPC-225ENST00000556513 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
HNRNPC-225ENST00000556513 FHOD3Q2V2M9 1422 aa16.98■□□□□ 0.31
HNRNPC-225ENST00000556513 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
HNRNPC-225ENST00000556513 RAPGEF6Q8TEU7 1601 aa16.97■□□□□ 0.31
HNRNPC-225ENST00000556513 GLI2P10070 1586 aa16.96■□□□□ 0.3
HNRNPC-225ENST00000556513 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
HNRNPC-225ENST00000556513 EPRSP07814 1512 aaKnown RBP16.95■□□□□ 0.3
HNRNPC-225ENST00000556513 PPRC1Q5VV67 1664 aaKnown RBP16.95■□□□□ 0.3
HNRNPC-225ENST00000556513 WDR7Q9Y4E6 1490 aa16.94■□□□□ 0.3
HNRNPC-225ENST00000556513 MAP3K4Q9Y6R4 1608 aa16.93■□□□□ 0.3
HNRNPC-225ENST00000556513 ATP10BO94823 1461 aa16.9■□□□□ 0.3
HNRNPC-225ENST00000556513 KDM6BO15054 1643 aa16.9■□□□□ 0.3
HNRNPC-225ENST00000556513 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
HNRNPC-225ENST00000556513 NUP153P49790 1475 aaKnown RBP16.87■□□□□ 0.29
HNRNPC-225ENST00000556513 CFAP43Q8NDM7 1665 aa16.86■□□□□ 0.29
HNRNPC-225ENST00000556513 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
HNRNPC-225ENST00000556513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
HNRNPC-225ENST00000556513 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
HNRNPC-225ENST00000556513 TEX14Q8IWB6 1497 aa16.8■□□□□ 0.28
HNRNPC-225ENST00000556513 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
HNRNPC-225ENST00000556513 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
HNRNPC-225ENST00000556513 FMN1Q68DA7 1419 aa16.78■□□□□ 0.28
HNRNPC-225ENST00000556513 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
HNRNPC-225ENST00000556513 HECW1Q76N89 1606 aa16.77■□□□□ 0.28
HNRNPC-225ENST00000556513 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.28
HNRNPC-225ENST00000556513 LRRIQ1Q96JM4 1722 aa16.76■□□□□ 0.27
HNRNPC-225ENST00000556513 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
HNRNPC-225ENST00000556513 COL17A1Q9UMD9 1497 aaPredicted RBP16.74■□□□□ 0.27
HNRNPC-225ENST00000556513 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
HNRNPC-225ENST00000556513 PCF11O94913 1555 aaKnown RBP16.71■□□□□ 0.27
HNRNPC-225ENST00000556513 CLIP1P30622 1438 aa16.71■□□□□ 0.27
HNRNPC-225ENST00000556513 TTC37Q6PGP7 1564 aa16.69■□□□□ 0.26
HNRNPC-225ENST00000556513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.67■□□□□ 0.261e-13■■■□□ 15.2
HNRNPC-225ENST00000556513 CASKIN1Q8WXD9 1431 aa16.64■□□□□ 0.25
HNRNPC-225ENST00000556513 KIF14Q15058 1648 aa16.63■□□□□ 0.25
HNRNPC-225ENST00000556513 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
HNRNPC-225ENST00000556513 CDK11AQ9UQ88 783 aaPredicted RBP16.62■□□□□ 0.25
HNRNPC-225ENST00000556513 ARAP3Q8WWN8 1544 aa16.61■□□□□ 0.25
HNRNPC-225ENST00000556513 MYO5CQ9NQX4 1742 aa16.61■□□□□ 0.25
HNRNPC-225ENST00000556513 CEP162Q5TB80 1403 aa16.61■□□□□ 0.25
HNRNPC-225ENST00000556513 NEO1Q92859 1461 aa16.61■□□□□ 0.25
HNRNPC-225ENST00000556513 FYCO1Q9BQS8 1478 aa16.61■□□□□ 0.25
HNRNPC-225ENST00000556513 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
HNRNPC-225ENST00000556513 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
HNRNPC-225ENST00000556513 TROQ12816 1431 aaPredicted RBP16.58■□□□□ 0.24
HNRNPC-225ENST00000556513 FANCAO15360 1455 aa16.57■□□□□ 0.24
HNRNPC-225ENST00000556513 PHLDB1Q86UU1 1377 aa16.57■□□□□ 0.24
HNRNPC-225ENST00000556513 RAPGEF3O95398 923 aa16.56■□□□□ 0.24
HNRNPC-225ENST00000556513 FRMPD1Q5SYB0 1578 aa16.56■□□□□ 0.24
HNRNPC-225ENST00000556513 RICTORQ6R327 1708 aa16.55■□□□□ 0.24
HNRNPC-225ENST00000556513 AKNAQ7Z591 1439 aa16.55■□□□□ 0.24
HNRNPC-225ENST00000556513 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
HNRNPC-225ENST00000556513 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
HNRNPC-225ENST00000556513 PLCH2O75038 1416 aa16.52■□□□□ 0.24
HNRNPC-225ENST00000556513 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
HNRNPC-225ENST00000556513 DENND4BO75064 1496 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms