RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
SRSF5-214ENST00000556436 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
SRSF5-214ENST00000556436 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
SRSF5-214ENST00000556436 KIAA0586Q9BVV6 1533 aa21.85■■□□□ 1.09
SRSF5-214ENST00000556436 KIF21BO75037 1637 aa21.84■■□□□ 1.09
SRSF5-214ENST00000556436 CTTNBP2Q8WZ74 1663 aa21.83■■□□□ 1.09
SRSF5-214ENST00000556436 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
SRSF5-214ENST00000556436 IQGAP2Q13576 1575 aa21.8■■□□□ 1.08
SRSF5-214ENST00000556436 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
SRSF5-214ENST00000556436 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
SRSF5-214ENST00000556436 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
SRSF5-214ENST00000556436 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
SRSF5-214ENST00000556436 UGGT2Q9NYU1 1516 aa21.68■■□□□ 1.06
SRSF5-214ENST00000556436 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
SRSF5-214ENST00000556436 DISP1Q96F81 1524 aa21.65■■□□□ 1.06
SRSF5-214ENST00000556436 KIAA0556O60303 1618 aa21.62■■□□□ 1.05
SRSF5-214ENST00000556436 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.05
SRSF5-214ENST00000556436 CARMIL2Q6F5E8 1435 aa21.55■■□□□ 1.04
SRSF5-214ENST00000556436 SAMD9Q5K651 1589 aa21.55■■□□□ 1.04
SRSF5-214ENST00000556436 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
SRSF5-214ENST00000556436 TNIKQ9UKE5 1360 aa21.5■■□□□ 1.03
SRSF5-214ENST00000556436 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
SRSF5-214ENST00000556436 PTPRGP23470 1445 aa21.46■■□□□ 1.03
SRSF5-214ENST00000556436 ADCY10Q96PN6 1610 aa21.45■■□□□ 1.02
SRSF5-214ENST00000556436 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
SRSF5-214ENST00000556436 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
SRSF5-214ENST00000556436 FHOD3Q2V2M9 1422 aa21.41■■□□□ 1.02
SRSF5-214ENST00000556436 P3H3Q8IVL6 736 aa21.41■■□□□ 1.02
SRSF5-214ENST00000556436 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.02
SRSF5-214ENST00000556436 LOC105371045A0A1W2PR82 267 aa21.36■■□□□ 1.01
SRSF5-214ENST00000556436 PLB1Q6P1J6 1458 aa21.36■■□□□ 1.01
SRSF5-214ENST00000556436 ABCA8O94911 1581 aa21.36■■□□□ 1.01
SRSF5-214ENST00000556436 ABCC2Q92887 1545 aa21.35■■□□□ 1.01
SRSF5-214ENST00000556436 UACAQ9BZF9 1416 aa21.35■■□□□ 1.01
SRSF5-214ENST00000556436 UHRF1BP1LA0JNW5 1464 aa21.33■■□□□ 1.01
SRSF5-214ENST00000556436 CLIP1P30622 1438 aa21.29■■□□□ 1
SRSF5-214ENST00000556436 RAPGEF6Q8TEU7 1601 aa21.28■■□□□ 1
SRSF5-214ENST00000556436 CEP162Q5TB80 1403 aa21.28■■□□□ 1
SRSF5-214ENST00000556436 ZCCHC11Q5TAX3 1644 aaKnown RBP21.26■□□□□ 0.99
SRSF5-214ENST00000556436 KDM5BQ9UGL1 1544 aa21.24■□□□□ 0.99
SRSF5-214ENST00000556436 MAPKBP1O60336 1514 aa21.23■□□□□ 0.99
SRSF5-214ENST00000556436 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
SRSF5-214ENST00000556436 FMN1Q68DA7 1419 aa21.19■□□□□ 0.98
SRSF5-214ENST00000556436 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
SRSF5-214ENST00000556436 ARID3CA6NKF2 412 aa21.14■□□□□ 0.97
SRSF5-214ENST00000556436 NPM1P06748 294 aaKnown RBP eCLIP21.14■□□□□ 0.97
SRSF5-214ENST00000556436 HECW1Q76N89 1606 aa21.14■□□□□ 0.97
SRSF5-214ENST00000556436 ATP10BO94823 1461 aa21.13■□□□□ 0.97
SRSF5-214ENST00000556436 ASXL2Q76L83 1435 aa21.13■□□□□ 0.97
SRSF5-214ENST00000556436 KIF13AQ9H1H9 1805 aa21.13■□□□□ 0.97
SRSF5-214ENST00000556436 LRRIQ1Q96JM4 1722 aa21.13■□□□□ 0.97
SRSF5-214ENST00000556436 DIP2BQ9P265 1576 aa21.11■□□□□ 0.97
SRSF5-214ENST00000556436 CDK13Q14004 1512 aaKnown RBP21.1■□□□□ 0.97
SRSF5-214ENST00000556436 CASKIN1Q8WXD9 1431 aa21.08■□□□□ 0.97
SRSF5-214ENST00000556436 ABCC10Q5T3U5 1492 aa21.07■□□□□ 0.96
SRSF5-214ENST00000556436 FYCO1Q9BQS8 1478 aa21.07■□□□□ 0.96
SRSF5-214ENST00000556436 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
SRSF5-214ENST00000556436 EPRSP07814 1512 aaKnown RBP21.06■□□□□ 0.96
SRSF5-214ENST00000556436 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
SRSF5-214ENST00000556436 ATP1B4Q9UN42 357 aaPredicted RBP21■□□□□ 0.95
SRSF5-214ENST00000556436 GLI2P10070 1586 aa20.99■□□□□ 0.95
SRSF5-214ENST00000556436 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
SRSF5-214ENST00000556436 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
SRSF5-214ENST00000556436 FAM69CQ0P6D2 419 aa20.97■□□□□ 0.95
SRSF5-214ENST00000556436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
SRSF5-214ENST00000556436 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
SRSF5-214ENST00000556436 MAP3K4Q9Y6R4 1608 aa20.94■□□□□ 0.94
SRSF5-214ENST00000556436 TSPOAP1O95153 1857 aa20.94■□□□□ 0.94
SRSF5-214ENST00000556436 MAGI3Q5TCQ9 1506 aa20.94■□□□□ 0.94
SRSF5-214ENST00000556436 PPRC1Q5VV67 1664 aaKnown RBP20.93■□□□□ 0.94
SRSF5-214ENST00000556436 CFAP43Q8NDM7 1665 aa20.92■□□□□ 0.94
SRSF5-214ENST00000556436 KCNH8Q96L42 1107 aa20.9■□□□□ 0.94
SRSF5-214ENST00000556436 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.94
SRSF5-214ENST00000556436 KIF14Q15058 1648 aa20.89■□□□□ 0.93
SRSF5-214ENST00000556436 TTC37Q6PGP7 1564 aa20.88■□□□□ 0.93
SRSF5-214ENST00000556436 TROQ12816 1431 aaPredicted RBP20.87■□□□□ 0.93
SRSF5-214ENST00000556436 PLEKHD1A6NEE1 506 aa20.87■□□□□ 0.93
SRSF5-214ENST00000556436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.85■□□□□ 0.93
SRSF5-214ENST00000556436 TIAM1Q13009 1591 aa20.85■□□□□ 0.93
SRSF5-214ENST00000556436 CD109Q6YHK3 1445 aa20.81■□□□□ 0.92
SRSF5-214ENST00000556436 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
SRSF5-214ENST00000556436 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
SRSF5-214ENST00000556436 MAP3K1Q13233 1512 aa20.76■□□□□ 0.91
SRSF5-214ENST00000556436 MTUS2Q5JR59 1369 aa20.75■□□□□ 0.91
SRSF5-214ENST00000556436 MYO5CQ9NQX4 1742 aa20.75■□□□□ 0.91
SRSF5-214ENST00000556436 TEX14Q8IWB6 1497 aa20.74■□□□□ 0.91
SRSF5-214ENST00000556436 LRRC9Q6ZRR7 1453 aa20.72■□□□□ 0.91
SRSF5-214ENST00000556436 CDC42BPAQ5VT25 1732 aa20.71■□□□□ 0.91
SRSF5-214ENST00000556436 PREX2Q70Z35 1606 aa20.7■□□□□ 0.9
SRSF5-214ENST00000556436 SUPT6HQ7KZ85 1726 aaKnown RBP20.69■□□□□ 0.9
SRSF5-214ENST00000556436 CDC42BPBQ9Y5S2 1711 aa20.69■□□□□ 0.9
SRSF5-214ENST00000556436 KDM6BO15054 1643 aa20.68■□□□□ 0.9
SRSF5-214ENST00000556436 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
SRSF5-214ENST00000556436 PLCH2O75038 1416 aa20.67■□□□□ 0.9
SRSF5-214ENST00000556436 ARAP3Q8WWN8 1544 aa20.67■□□□□ 0.9
SRSF5-214ENST00000556436 COL17A1Q9UMD9 1497 aaPredicted RBP20.66■□□□□ 0.9
SRSF5-214ENST00000556436 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
SRSF5-214ENST00000556436 FANCAO15360 1455 aa20.65■□□□□ 0.9
SRSF5-214ENST00000556436 NCOA2Q15596 1464 aa20.64■□□□□ 0.89
SRSF5-214ENST00000556436 NEO1Q92859 1461 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms