RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CUL7Q14999 1698 aa32.92■■■□□ 2.86
CDKN3-209ENST00000556102 IGF1RP08069 1367 aa32.92■■■□□ 2.86
CDKN3-209ENST00000556102 KIAA0586Q9BVV6 1533 aa32.83■■■□□ 2.85
CDKN3-209ENST00000556102 KIF13AQ9H1H9 1805 aa32.74■■■□□ 2.83
CDKN3-209ENST00000556102 CARMIL1Q5VZK9 1371 aa32.71■■■□□ 2.83
CDKN3-209ENST00000556102 ADCY10Q96PN6 1610 aa32.66■■■□□ 2.82
CDKN3-209ENST00000556102 NPM1P06748 294 aaKnown RBP eCLIP32.64■■■□□ 2.82
CDKN3-209ENST00000556102 MAPKBP1O60336 1514 aa32.62■■■□□ 2.81
CDKN3-209ENST00000556102 ABCC10Q5T3U5 1492 aa32.58■■■□□ 2.81
CDKN3-209ENST00000556102 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
CDKN3-209ENST00000556102 DIP2BQ9P265 1576 aa32.52■■■□□ 2.8
CDKN3-209ENST00000556102 FAM69CQ0P6D2 419 aa32.51■■■□□ 2.79
CDKN3-209ENST00000556102 PTPRGP23470 1445 aa32.51■■■□□ 2.79
CDKN3-209ENST00000556102 CARMIL2Q6F5E8 1435 aa32.51■■■□□ 2.79
CDKN3-209ENST00000556102 TNIKQ9UKE5 1360 aa32.47■■■□□ 2.79
CDKN3-209ENST00000556102 AEBP2Q6ZN18 517 aaPredicted RBP32.45■■■□□ 2.79
CDKN3-209ENST00000556102 RAPGEF2Q9Y4G8 1499 aa32.44■■■□□ 2.78
CDKN3-209ENST00000556102 TTBK1Q5TCY1 1321 aaPredicted RBP32.39■■■□□ 2.78
CDKN3-209ENST00000556102 DISP1Q96F81 1524 aa32.36■■■□□ 2.77
CDKN3-209ENST00000556102 ABCC2Q92887 1545 aa32.36■■■□□ 2.77
CDKN3-209ENST00000556102 UGGT2Q9NYU1 1516 aa32.33■■■□□ 2.77
CDKN3-209ENST00000556102 UHRF1BP1LA0JNW5 1464 aa32.3■■■□□ 2.76
CDKN3-209ENST00000556102 TSPOAP1O95153 1857 aa32.29■■■□□ 2.76
CDKN3-209ENST00000556102 UACAQ9BZF9 1416 aa32.27■■■□□ 2.76
CDKN3-209ENST00000556102 KIAA0556O60303 1618 aa32.25■■■□□ 2.75
CDKN3-209ENST00000556102 ASXL2Q76L83 1435 aa32.23■■■□□ 2.75
CDKN3-209ENST00000556102 PLB1Q6P1J6 1458 aa32.23■■■□□ 2.75
CDKN3-209ENST00000556102 KDM6BO15054 1643 aa32.22■■■□□ 2.75
CDKN3-209ENST00000556102 CTTNBP2Q8WZ74 1663 aa32.22■■■□□ 2.75
CDKN3-209ENST00000556102 GLI2P10070 1586 aa32.16■■■□□ 2.74
CDKN3-209ENST00000556102 KDM5BQ9UGL1 1544 aa32.16■■■□□ 2.74
CDKN3-209ENST00000556102 PRXQ9BXM0 1461 aa32.11■■■□□ 2.73
CDKN3-209ENST00000556102 ZCCHC11Q5TAX3 1644 aaKnown RBP32.1■■■□□ 2.73
CDKN3-209ENST00000556102 PPRC1Q5VV67 1664 aaKnown RBP32.08■■■□□ 2.73
CDKN3-209ENST00000556102 GOLGA3Q08378 1498 aa32.07■■■□□ 2.72
CDKN3-209ENST00000556102 EPRSP07814 1512 aaKnown RBP32.04■■■□□ 2.72
CDKN3-209ENST00000556102 MAP3K4Q9Y6R4 1608 aa31.99■■■□□ 2.71
CDKN3-209ENST00000556102 ABCA8O94911 1581 aa31.94■■■□□ 2.7
CDKN3-209ENST00000556102 WDR7Q9Y4E6 1490 aa31.93■■■□□ 2.7
CDKN3-209ENST00000556102 TEX14Q8IWB6 1497 aa31.9■■■□□ 2.7
CDKN3-209ENST00000556102 KDM4FA0A1W2PPD8 638 aa31.84■■■□□ 2.69
CDKN3-209ENST00000556102 CSRNP3Q8WYN3 585 aa31.84■■■□□ 2.69
CDKN3-209ENST00000556102 COL17A1Q9UMD9 1497 aaPredicted RBP31.82■■■□□ 2.68
CDKN3-209ENST00000556102 CFAP43Q8NDM7 1665 aa31.77■■■□□ 2.68
CDKN3-209ENST00000556102 EEA1Q15075 1411 aa31.75■■■□□ 2.67
CDKN3-209ENST00000556102 FAM9AQ8IZU1 332 aaPredicted RBP31.75■■■□□ 2.67
CDKN3-209ENST00000556102 SAMD9Q5K651 1589 aa31.74■■■□□ 2.67
CDKN3-209ENST00000556102 P3H3Q8IVL6 736 aa31.73■■■□□ 2.67
CDKN3-209ENST00000556102 MAGI3Q5TCQ9 1506 aa31.72■■■□□ 2.67
CDKN3-209ENST00000556102 CD109Q6YHK3 1445 aa31.72■■■□□ 2.67
CDKN3-209ENST00000556102 KCNH8Q96L42 1107 aa31.71■■■□□ 2.67
CDKN3-209ENST00000556102 ATP10BO94823 1461 aa31.65■■■□□ 2.66
CDKN3-209ENST00000556102 ADGRL1O94910 1474 aa31.63■■■□□ 2.65
CDKN3-209ENST00000556102 RAPGEF6Q8TEU7 1601 aa31.61■■■□□ 2.65
CDKN3-209ENST00000556102 ARID3CA6NKF2 412 aa31.61■■■□□ 2.65
CDKN3-209ENST00000556102 KIF21BO75037 1637 aa31.52■■■□□ 2.64
CDKN3-209ENST00000556102 ABCA9Q8IUA7 1624 aa31.52■■■□□ 2.64
CDKN3-209ENST00000556102 FHOD3Q2V2M9 1422 aa31.49■■■□□ 2.63
CDKN3-209ENST00000556102 RANGAP1P46060 587 aaPredicted RBP31.48■■■□□ 2.63
CDKN3-209ENST00000556102 NUP153P49790 1475 aaKnown RBP31.47■■■□□ 2.63
CDKN3-209ENST00000556102 ARAP3Q8WWN8 1544 aa31.46■■■□□ 2.63
CDKN3-209ENST00000556102 EFCAB5A4FU69 1503 aa31.44■■■□□ 2.62
CDKN3-209ENST00000556102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.43■■■□□ 2.62
CDKN3-209ENST00000556102 HNRNPUL2Q1KMD3 747 aaKnown RBP31.43■■■□□ 2.62
CDKN3-209ENST00000556102 PHLDB1Q86UU1 1377 aa31.41■■■□□ 2.62
CDKN3-209ENST00000556102 NEO1Q92859 1461 aa31.35■■■□□ 2.61
CDKN3-209ENST00000556102 PLEKHD1A6NEE1 506 aa31.29■■■□□ 2.6
CDKN3-209ENST00000556102 CHIC1Q5VXU3 224 aa31.26■■■□□ 2.59
CDKN3-209ENST00000556102 RAPGEF3O95398 923 aa31.23■■■□□ 2.59
CDKN3-209ENST00000556102 UBTFP17480 764 aaKnown RBP31.22■■■□□ 2.59
CDKN3-209ENST00000556102 FRMPD1Q5SYB0 1578 aa31.22■■■□□ 2.59
CDKN3-209ENST00000556102 HECW2Q9P2P5 1572 aa31.19■■■□□ 2.58
CDKN3-209ENST00000556102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.19■■■□□ 2.58
CDKN3-209ENST00000556102 CDK13Q14004 1512 aaKnown RBP31.18■■■□□ 2.58
CDKN3-209ENST00000556102 EHMT2Q96KQ7 1210 aa31.17■■■□□ 2.58
CDKN3-209ENST00000556102 CFAP74Q9C0B2 1584 aa31.17■■■□□ 2.58
CDKN3-209ENST00000556102 TTC37Q6PGP7 1564 aa31.15■■■□□ 2.58
CDKN3-209ENST00000556102 FMN1Q68DA7 1419 aa31.14■■■□□ 2.58
CDKN3-209ENST00000556102 FANCAO15360 1455 aa31.13■■■□□ 2.57
CDKN3-209ENST00000556102 ARHGAP35Q9NRY4 1499 aa31.13■■■□□ 2.57
CDKN3-209ENST00000556102 AKNAQ7Z591 1439 aa31.12■■■□□ 2.57
CDKN3-209ENST00000556102 DENND4BO75064 1496 aaPredicted RBP31.12■■■□□ 2.57
CDKN3-209ENST00000556102 RICTORQ6R327 1708 aa31.11■■■□□ 2.57
CDKN3-209ENST00000556102 HECW1Q76N89 1606 aa31.11■■■□□ 2.57
CDKN3-209ENST00000556102 ADAMTSL3P82987 1691 aa31.1■■■□□ 2.57
CDKN3-209ENST00000556102 ARHGEF40Q8TER5 1519 aa31.06■■■□□ 2.56
CDKN3-209ENST00000556102 BCORL1Q5H9F3 1711 aa31.04■■■□□ 2.56
CDKN3-209ENST00000556102 ATP1B4Q9UN42 357 aaPredicted RBP31.02■■■□□ 2.56
CDKN3-209ENST00000556102 PTPRMP28827 1452 aa31.01■■■□□ 2.55
CDKN3-209ENST00000556102 ZMYM4Q5VZL5 1548 aa31■■■□□ 2.55
CDKN3-209ENST00000556102 ARID4BQ4LE39 1312 aaPredicted RBP30.98■■■□□ 2.55
CDKN3-209ENST00000556102 PLCH2O75038 1416 aa30.98■■■□□ 2.55
CDKN3-209ENST00000556102 CDK11AQ9UQ88 783 aaPredicted RBP30.96■■■□□ 2.55
CDKN3-209ENST00000556102 MADDQ8WXG6 1647 aa30.95■■■□□ 2.55
CDKN3-209ENST00000556102 MYO5CQ9NQX4 1742 aa30.95■■■□□ 2.54
CDKN3-209ENST00000556102 ZFYVE16Q7Z3T8 1539 aa30.93■■■□□ 2.54
CDKN3-209ENST00000556102 MAGI2Q86UL8 1455 aa30.92■■■□□ 2.54
CDKN3-209ENST00000556102 LRRIQ1Q96JM4 1722 aa30.91■■■□□ 2.54
CDKN3-209ENST00000556102 KIF14Q15058 1648 aa30.91■■■□□ 2.54
CDKN3-209ENST00000556102 SCAPERQ9BY12 1400 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms