RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 FBLN2P98095 1184 aa19.42■□□□□ 0.7
APEX1-212ENST00000556054 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
APEX1-212ENST00000556054 CEP170Q5SW79 1584 aa19.4■□□□□ 0.7
APEX1-212ENST00000556054 IQGAP2Q13576 1575 aa19.35■□□□□ 0.69
APEX1-212ENST00000556054 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
APEX1-212ENST00000556054 CLASP1Q7Z460 1538 aa19.31■□□□□ 0.68
APEX1-212ENST00000556054 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
APEX1-212ENST00000556054 UGGT2Q9NYU1 1516 aa19.3■□□□□ 0.68
APEX1-212ENST00000556054 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
APEX1-212ENST00000556054 EFCAB5A4FU69 1503 aa19.26■□□□□ 0.67
APEX1-212ENST00000556054 SHROOM2Q13796 1616 aa19.26■□□□□ 0.67
APEX1-212ENST00000556054 JPH4Q96JJ6 628 aa19.24■□□□□ 0.67
APEX1-212ENST00000556054 CLIP1P30622 1438 aa19.24■□□□□ 0.67
APEX1-212ENST00000556054 SAMD9Q5K651 1589 aa19.23■□□□□ 0.67
APEX1-212ENST00000556054 ARHGAP35Q9NRY4 1499 aa19.19■□□□□ 0.66
APEX1-212ENST00000556054 CARMIL2Q6F5E8 1435 aa19.17■□□□□ 0.66
APEX1-212ENST00000556054 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
APEX1-212ENST00000556054 KIAA0556O60303 1618 aa19.14■□□□□ 0.66
APEX1-212ENST00000556054 PRG4Q92954 1404 aaPredicted RBP19.14■□□□□ 0.65
APEX1-212ENST00000556054 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
APEX1-212ENST00000556054 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.64
APEX1-212ENST00000556054 FMN1Q68DA7 1419 aa19.07■□□□□ 0.64
APEX1-212ENST00000556054 FHOD3Q2V2M9 1422 aa19.05■□□□□ 0.64
APEX1-212ENST00000556054 VPS8Q8N3P4 1428 aa19.04■□□□□ 0.64
APEX1-212ENST00000556054 P3H3Q8IVL6 736 aa19.02■□□□□ 0.64
APEX1-212ENST00000556054 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
APEX1-212ENST00000556054 PTPRGP23470 1445 aa19■□□□□ 0.63
APEX1-212ENST00000556054 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
APEX1-212ENST00000556054 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.63
APEX1-212ENST00000556054 FYCO1Q9BQS8 1478 aa18.95■□□□□ 0.62
APEX1-212ENST00000556054 ABCA8O94911 1581 aa18.93■□□□□ 0.62
APEX1-212ENST00000556054 RAPGEF6Q8TEU7 1601 aa18.92■□□□□ 0.62
APEX1-212ENST00000556054 RIMBP3CA6NJZ7 1639 aa18.91■□□□□ 0.62
APEX1-212ENST00000556054 RIMBP3BA6NNM3 1639 aa18.91■□□□□ 0.62
APEX1-212ENST00000556054 RIMBP3Q9UFD9 1639 aa18.91■□□□□ 0.62
APEX1-212ENST00000556054 UACAQ9BZF9 1416 aa18.9■□□□□ 0.62
APEX1-212ENST00000556054 UHRF1BP1LA0JNW5 1464 aa18.9■□□□□ 0.62
APEX1-212ENST00000556054 PCF11O94913 1555 aaKnown RBP18.89■□□□□ 0.62
APEX1-212ENST00000556054 MAP3K1Q13233 1512 aa18.89■□□□□ 0.61
APEX1-212ENST00000556054 HECW1Q76N89 1606 aa18.89■□□□□ 0.61
APEX1-212ENST00000556054 PLB1Q6P1J6 1458 aa18.87■□□□□ 0.61
APEX1-212ENST00000556054 ABCC2Q92887 1545 aa18.85■□□□□ 0.61
APEX1-212ENST00000556054 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
APEX1-212ENST00000556054 NUP153P49790 1475 aaKnown RBP18.84■□□□□ 0.61
APEX1-212ENST00000556054 EPRSP07814 1512 aaKnown RBP18.81■□□□□ 0.6
APEX1-212ENST00000556054 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
APEX1-212ENST00000556054 TTBK1Q5TCY1 1321 aaPredicted RBP18.8■□□□□ 0.6
APEX1-212ENST00000556054 APLP2Q06481 763 aa18.79■□□□□ 0.6
APEX1-212ENST00000556054 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
APEX1-212ENST00000556054 TIAM1Q13009 1591 aa18.78■□□□□ 0.6
APEX1-212ENST00000556054 KDM5BQ9UGL1 1544 aa18.78■□□□□ 0.6
APEX1-212ENST00000556054 ADCY10Q96PN6 1610 aa18.78■□□□□ 0.6
APEX1-212ENST00000556054 ATP10BO94823 1461 aa18.76■□□□□ 0.59
APEX1-212ENST00000556054 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
APEX1-212ENST00000556054 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
APEX1-212ENST00000556054 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
APEX1-212ENST00000556054 CDK13Q14004 1512 aaKnown RBP18.7■□□□□ 0.58
APEX1-212ENST00000556054 ZCCHC11Q5TAX3 1644 aaKnown RBP18.7■□□□□ 0.58
APEX1-212ENST00000556054 LRRC9Q6ZRR7 1453 aa18.7■□□□□ 0.58
APEX1-212ENST00000556054 NPM1P06748 294 aaKnown RBP eCLIP18.67■□□□□ 0.58
APEX1-212ENST00000556054 EHBP1L1Q8N3D4 1523 aa18.66■□□□□ 0.58
APEX1-212ENST00000556054 PLEKHD1A6NEE1 506 aa18.65■□□□□ 0.58
APEX1-212ENST00000556054 MTUS2Q5JR59 1369 aa18.65■□□□□ 0.58
APEX1-212ENST00000556054 TROQ12816 1431 aaPredicted RBP18.65■□□□□ 0.58
APEX1-212ENST00000556054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
APEX1-212ENST00000556054 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
APEX1-212ENST00000556054 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
APEX1-212ENST00000556054 MAGI3Q5TCQ9 1506 aa18.63■□□□□ 0.57
APEX1-212ENST00000556054 MAPKBP1O60336 1514 aa18.61■□□□□ 0.57
APEX1-212ENST00000556054 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
APEX1-212ENST00000556054 SUPT6HQ7KZ85 1726 aaKnown RBP18.6■□□□□ 0.57
APEX1-212ENST00000556054 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.56
APEX1-212ENST00000556054 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
APEX1-212ENST00000556054 KIF14Q15058 1648 aa18.54■□□□□ 0.56
APEX1-212ENST00000556054 NCOA2Q15596 1464 aa18.53■□□□□ 0.56
APEX1-212ENST00000556054 ABCC10Q5T3U5 1492 aa18.51■□□□□ 0.55
APEX1-212ENST00000556054 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
APEX1-212ENST00000556054 GLI2P10070 1586 aa18.47■□□□□ 0.55
APEX1-212ENST00000556054 ABCA9Q8IUA7 1624 aa18.47■□□□□ 0.55
APEX1-212ENST00000556054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.47■□□□□ 0.55
APEX1-212ENST00000556054 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
APEX1-212ENST00000556054 ITSN2Q9NZM3 1697 aa18.45■□□□□ 0.54
APEX1-212ENST00000556054 MYOM3Q5VTT5 1437 aa18.45■□□□□ 0.54
APEX1-212ENST00000556054 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
APEX1-212ENST00000556054 MIA2Q96PC5 1412 aa18.44■□□□□ 0.54
APEX1-212ENST00000556054 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
APEX1-212ENST00000556054 ARAP3Q8WWN8 1544 aa18.44■□□□□ 0.54
APEX1-212ENST00000556054 GPATCH8Q9UKJ3 1502 aaKnown RBP18.43■□□□□ 0.54
APEX1-212ENST00000556054 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
APEX1-212ENST00000556054 MYO5CQ9NQX4 1742 aa18.42■□□□□ 0.54
APEX1-212ENST00000556054 TTC37Q6PGP7 1564 aa18.42■□□□□ 0.54
APEX1-212ENST00000556054 RRBP1Q9P2E9 1410 aaKnown RBP18.41■□□□□ 0.54
APEX1-212ENST00000556054 DIP2BQ9P265 1576 aa18.41■□□□□ 0.54
APEX1-212ENST00000556054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
APEX1-212ENST00000556054 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
APEX1-212ENST00000556054 PLCH2O75038 1416 aa18.4■□□□□ 0.54
APEX1-212ENST00000556054 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
APEX1-212ENST00000556054 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
APEX1-212ENST00000556054 MAP3K4Q9Y6R4 1608 aa18.37■□□□□ 0.53
APEX1-212ENST00000556054 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms