RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-219	ENST00000555906	IGF1R	P08069	1367 aa		34.49	■■■■□ 3.11
PRKCH-219	ENST00000555906	JPH4	Q96JJ6	628 aa		34.47	■■■■□ 3.11
PRKCH-219	ENST00000555906	KIAA0586	Q9BVV6	1533 aa		34.42	■■■■□ 3.1
PRKCH-219	ENST00000555906	KIF13A	Q9H1H9	1805 aa		34.32	■■■■□ 3.09
PRKCH-219	ENST00000555906	CARMIL1	Q5VZK9	1371 aa		34.27	■■■■□ 3.08
PRKCH-219	ENST00000555906	ADCY10	Q96PN6	1610 aa		34.26	■■■■□ 3.08
PRKCH-219	ENST00000555906	MAPKBP1	O60336	1514 aa		34.21	■■■■□ 3.07
PRKCH-219	ENST00000555906	IQGAP2	Q13576	1575 aa		34.18	■■■■□ 3.06
PRKCH-219	ENST00000555906	ABCC10	Q5T3U5	1492 aa		34.1	■■■■□ 3.05
PRKCH-219	ENST00000555906	DIP2B	Q9P265	1576 aa		34.1	■■■■□ 3.05
PRKCH-219	ENST00000555906	CARMIL2	Q6F5E8	1435 aa		34.05	■■■■□ 3.04
PRKCH-219	ENST00000555906	NPM1	P06748	294 aa	Known RBP eCLIP	34.05	■■■■□ 3.04
PRKCH-219	ENST00000555906	RAPGEF2	Q9Y4G8	1499 aa		34.04	■■■■□ 3.04
PRKCH-219	ENST00000555906	PTPRG	P23470	1445 aa		34.01	■■■■□ 3.03
PRKCH-219	ENST00000555906	TNIK	Q9UKE5	1360 aa		34	■■■■□ 3.03
PRKCH-219	ENST00000555906	DISP1	Q96F81	1524 aa		33.95	■■■■□ 3.03
PRKCH-219	ENST00000555906	UGGT2	Q9NYU1	1516 aa		33.95	■■■■□ 3.03
PRKCH-219	ENST00000555906	FAM69C	Q0P6D2	419 aa		33.92	■■■■□ 3.02
PRKCH-219	ENST00000555906	CTTNBP2	Q8WZ74	1663 aa		33.92	■■■■□ 3.02
PRKCH-219	ENST00000555906	ABCC2	Q92887	1545 aa		33.91	■■■■□ 3.02
PRKCH-219	ENST00000555906	KIAA0556	O60303	1618 aa		33.89	■■■■□ 3.02
PRKCH-219	ENST00000555906	UHRF1BP1L	A0JNW5	1464 aa		33.88	■■■■□ 3.01
PRKCH-219	ENST00000555906	UACA	Q9BZF9	1416 aa		33.8	■■■■□ 3
PRKCH-219	ENST00000555906	TSPOAP1	O95153	1857 aa		33.8	■■■■□ 3
PRKCH-219	ENST00000555906	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.79	■■■■□ 3
PRKCH-219	ENST00000555906	PLB1	Q6P1J6	1458 aa		33.75	■■■□□ 2.99
PRKCH-219	ENST00000555906	KDM6B	O15054	1643 aa		33.75	■■■□□ 2.99
PRKCH-219	ENST00000555906	ASXL2	Q76L83	1435 aa		33.74	■■■□□ 2.99
PRKCH-219	ENST00000555906	PRX	Q9BXM0	1461 aa		33.74	■■■□□ 2.99
PRKCH-219	ENST00000555906	GLI2	P10070	1586 aa		33.72	■■■□□ 2.99
PRKCH-219	ENST00000555906	KDM5B	Q9UGL1	1544 aa		33.72	■■■□□ 2.99
PRKCH-219	ENST00000555906	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.71	■■■□□ 2.99
PRKCH-219	ENST00000555906	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.69	■■■□□ 2.98
PRKCH-219	ENST00000555906	GOLGA3	Q08378	1498 aa		33.66	■■■□□ 2.98
PRKCH-219	ENST00000555906	PPRC1	Q5VV67	1664 aa	Known RBP	33.65	■■■□□ 2.98
PRKCH-219	ENST00000555906	MAP3K4	Q9Y6R4	1608 aa		33.57	■■■□□ 2.97
PRKCH-219	ENST00000555906	EPRS	P07814	1512 aa	Known RBP	33.57	■■■□□ 2.96
PRKCH-219	ENST00000555906	ABCA8	O94911	1581 aa		33.54	■■■□□ 2.96
PRKCH-219	ENST00000555906	WDR7	Q9Y4E6	1490 aa		33.48	■■■□□ 2.95
PRKCH-219	ENST00000555906	TEX14	Q8IWB6	1497 aa		33.42	■■■□□ 2.94
PRKCH-219	ENST00000555906	EEA1	Q15075	1411 aa		33.41	■■■□□ 2.94
PRKCH-219	ENST00000555906	SAMD9	Q5K651	1589 aa		33.39	■■■□□ 2.94
PRKCH-219	ENST00000555906	CSRNP3	Q8WYN3	585 aa		33.36	■■■□□ 2.93
PRKCH-219	ENST00000555906	CFAP43	Q8NDM7	1665 aa		33.36	■■■□□ 2.93
PRKCH-219	ENST00000555906	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.27	■■■□□ 2.92
PRKCH-219	ENST00000555906	MAGI3	Q5TCQ9	1506 aa		33.24	■■■□□ 2.91
PRKCH-219	ENST00000555906	RAPGEF6	Q8TEU7	1601 aa		33.21	■■■□□ 2.91
PRKCH-219	ENST00000555906	KIF21B	O75037	1637 aa		33.2	■■■□□ 2.9
PRKCH-219	ENST00000555906	CD109	Q6YHK3	1445 aa		33.19	■■■□□ 2.9
PRKCH-219	ENST00000555906	KDM4F	A0A1W2PPD8	638 aa		33.18	■■■□□ 2.9
PRKCH-219	ENST00000555906	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.18	■■■□□ 2.9
PRKCH-219	ENST00000555906	ATP10B	O94823	1461 aa		33.17	■■■□□ 2.9
PRKCH-219	ENST00000555906	P3H3	Q8IVL6	736 aa		33.15	■■■□□ 2.9
PRKCH-219	ENST00000555906	ABCA9	Q8IUA7	1624 aa		33.1	■■■□□ 2.89
PRKCH-219	ENST00000555906	KCNH8	Q96L42	1107 aa		33.09	■■■□□ 2.89
PRKCH-219	ENST00000555906	EFCAB5	A4FU69	1503 aa		33.08	■■■□□ 2.89
PRKCH-219	ENST00000555906	ADGRL1	O94910	1474 aa		33.07	■■■□□ 2.88
PRKCH-219	ENST00000555906	FHOD3	Q2V2M9	1422 aa		33.04	■■■□□ 2.88
PRKCH-219	ENST00000555906	NUP153	P49790	1475 aa	Known RBP	33.04	■■■□□ 2.88
PRKCH-219	ENST00000555906	ARID3C	A6NKF2	412 aa		33.02	■■■□□ 2.88
PRKCH-219	ENST00000555906	ARAP3	Q8WWN8	1544 aa		32.97	■■■□□ 2.87
PRKCH-219	ENST00000555906	RANGAP1	P46060	587 aa	Predicted RBP	32.9	■■■□□ 2.86
PRKCH-219	ENST00000555906	PHLDB1	Q86UU1	1377 aa		32.88	■■■□□ 2.85
PRKCH-219	ENST00000555906	NEO1	Q92859	1461 aa		32.86	■■■□□ 2.85
PRKCH-219	ENST00000555906	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.83	■■■□□ 2.85
PRKCH-219	ENST00000555906	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.83	■■■□□ 2.85
PRKCH-219	ENST00000555906	CHIC1	Q5VXU3	224 aa		32.81	■■■□□ 2.84
PRKCH-219	ENST00000555906	FRMPD1	Q5SYB0	1578 aa		32.77	■■■□□ 2.84
PRKCH-219	ENST00000555906	CFAP74	Q9C0B2	1584 aa		32.76	■■■□□ 2.84
PRKCH-219	ENST00000555906	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.73	■■■□□ 2.83
PRKCH-219	ENST00000555906	TTC37	Q6PGP7	1564 aa		32.73	■■■□□ 2.83
PRKCH-219	ENST00000555906	HECW1	Q76N89	1606 aa		32.73	■■■□□ 2.83
PRKCH-219	ENST00000555906	CDK13	Q14004	1512 aa	Known RBP	32.72	■■■□□ 2.83
PRKCH-219	ENST00000555906	PLEKHD1	A6NEE1	506 aa		32.71	■■■□□ 2.83
PRKCH-219	ENST00000555906	ARHGAP35	Q9NRY4	1499 aa		32.7	■■■□□ 2.83
PRKCH-219	ENST00000555906	FMN1	Q68DA7	1419 aa		32.69	■■■□□ 2.82
PRKCH-219	ENST00000555906	UBTF	P17480	764 aa	Known RBP	32.68	■■■□□ 2.82
PRKCH-219	ENST00000555906	RICTOR	Q6R327	1708 aa		32.67	■■■□□ 2.82
PRKCH-219	ENST00000555906	FANCA	O15360	1455 aa		32.63	■■■□□ 2.81
PRKCH-219	ENST00000555906	HECW2	Q9P2P5	1572 aa		32.62	■■■□□ 2.81
PRKCH-219	ENST00000555906	ARHGEF40	Q8TER5	1519 aa		32.62	■■■□□ 2.81
PRKCH-219	ENST00000555906	RAPGEF3	O95398	923 aa		32.61	■■■□□ 2.81
PRKCH-219	ENST00000555906	EHMT2	Q96KQ7	1210 aa		32.6	■■■□□ 2.81
PRKCH-219	ENST00000555906	ADAMTSL3	P82987	1691 aa		32.59	■■■□□ 2.81
PRKCH-219	ENST00000555906	AKNA	Q7Z591	1439 aa		32.59	■■■□□ 2.81
PRKCH-219	ENST00000555906	DENND4B	O75064	1496 aa	Predicted RBP	32.58	■■■□□ 2.81
PRKCH-219	ENST00000555906	ZMYM4	Q5VZL5	1548 aa		32.56	■■■□□ 2.8
PRKCH-219	ENST00000555906	BCORL1	Q5H9F3	1711 aa		32.54	■■■□□ 2.8
PRKCH-219	ENST00000555906	MYO5C	Q9NQX4	1742 aa		32.54	■■■□□ 2.8
PRKCH-219	ENST00000555906	LRRIQ1	Q96JM4	1722 aa		32.53	■■■□□ 2.8
PRKCH-219	ENST00000555906	KIF14	Q15058	1648 aa		32.5	■■■□□ 2.79
PRKCH-219	ENST00000555906	PLCH2	O75038	1416 aa		32.47	■■■□□ 2.79
PRKCH-219	ENST00000555906	PCF11	O94913	1555 aa	Known RBP	32.44	■■■□□ 2.78
PRKCH-219	ENST00000555906	MADD	Q8WXG6	1647 aa		32.44	■■■□□ 2.78
PRKCH-219	ENST00000555906	ZFYVE16	Q7Z3T8	1539 aa		32.43	■■■□□ 2.78
PRKCH-219	ENST00000555906	TRO	Q12816	1431 aa	Predicted RBP	32.43	■■■□□ 2.78
PRKCH-219	ENST00000555906	PTPRM	P28827	1452 aa		32.42	■■■□□ 2.78
PRKCH-219	ENST00000555906	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.41	■■■□□ 2.78
PRKCH-219	ENST00000555906	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.41	■■■□□ 2.78
PRKCH-219	ENST00000555906	POGZ	Q7Z3K3	1410 aa		32.41	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms