RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CUL7Q14999 1698 aa22.14■■□□□ 1.13
HNRNPC-221ENST00000555883 JPH4Q96JJ6 628 aa22.12■■□□□ 1.13
HNRNPC-221ENST00000555883 PRG4Q92954 1404 aaPredicted RBP22.11■■□□□ 1.13
HNRNPC-221ENST00000555883 KIAA0586Q9BVV6 1533 aa22.07■■□□□ 1.12
HNRNPC-221ENST00000555883 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
HNRNPC-221ENST00000555883 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
HNRNPC-221ENST00000555883 MAPKBP1O60336 1514 aa21.87■■□□□ 1.09
HNRNPC-221ENST00000555883 ADCY10Q96PN6 1610 aa21.85■■□□□ 1.09
HNRNPC-221ENST00000555883 IQGAP2Q13576 1575 aa21.85■■□□□ 1.09
HNRNPC-221ENST00000555883 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.09
HNRNPC-221ENST00000555883 CARMIL2Q6F5E8 1435 aa21.83■■□□□ 1.09
HNRNPC-221ENST00000555883 NPM1P06748 294 aaKnown RBP eCLIP21.83■■□□□ 1.09
HNRNPC-221ENST00000555883 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
HNRNPC-221ENST00000555883 KIF13AQ9H1H9 1805 aa21.8■■□□□ 1.08
HNRNPC-221ENST00000555883 PTPRGP23470 1445 aa21.8■■□□□ 1.08
HNRNPC-221ENST00000555883 TNIKQ9UKE5 1360 aa21.79■■□□□ 1.08
HNRNPC-221ENST00000555883 UGGT2Q9NYU1 1516 aa21.75■■□□□ 1.07
HNRNPC-221ENST00000555883 DISP1Q96F81 1524 aa21.74■■□□□ 1.07
HNRNPC-221ENST00000555883 DIP2BQ9P265 1576 aa21.73■■□□□ 1.07
HNRNPC-221ENST00000555883 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
HNRNPC-221ENST00000555883 ABCC2Q92887 1545 aa21.7■■□□□ 1.07
HNRNPC-221ENST00000555883 FAM69CQ0P6D2 419 aa21.7■■□□□ 1.06
HNRNPC-221ENST00000555883 PRXQ9BXM0 1461 aa21.66■■□□□ 1.06
HNRNPC-221ENST00000555883 UACAQ9BZF9 1416 aa21.65■■□□□ 1.06
HNRNPC-221ENST00000555883 KIAA0556O60303 1618 aa21.64■■□□□ 1.05
HNRNPC-221ENST00000555883 CTTNBP2Q8WZ74 1663 aa21.61■■□□□ 1.05
HNRNPC-221ENST00000555883 PLB1Q6P1J6 1458 aa21.61■■□□□ 1.05
HNRNPC-221ENST00000555883 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
HNRNPC-221ENST00000555883 GOLGA3Q08378 1498 aa21.58■■□□□ 1.05
HNRNPC-221ENST00000555883 ASXL2Q76L83 1435 aa21.58■■□□□ 1.05
HNRNPC-221ENST00000555883 GLI2P10070 1586 aa21.57■■□□□ 1.04
HNRNPC-221ENST00000555883 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
HNRNPC-221ENST00000555883 EEA1Q15075 1411 aa21.5■■□□□ 1.03
HNRNPC-221ENST00000555883 KDM6BO15054 1643 aa21.49■■□□□ 1.03
HNRNPC-221ENST00000555883 ZCCHC11Q5TAX3 1644 aaKnown RBP21.47■■□□□ 1.03
HNRNPC-221ENST00000555883 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
HNRNPC-221ENST00000555883 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
HNRNPC-221ENST00000555883 ABCA8O94911 1581 aa21.45■■□□□ 1.02
HNRNPC-221ENST00000555883 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
HNRNPC-221ENST00000555883 PPRC1Q5VV67 1664 aaKnown RBP21.42■■□□□ 1.02
HNRNPC-221ENST00000555883 MAP3K4Q9Y6R4 1608 aa21.41■■□□□ 1.02
HNRNPC-221ENST00000555883 WDR7Q9Y4E6 1490 aa21.41■■□□□ 1.02
HNRNPC-221ENST00000555883 TEX14Q8IWB6 1497 aa21.38■■□□□ 1.01
HNRNPC-221ENST00000555883 FAM9AQ8IZU1 332 aaPredicted RBP21.36■■□□□ 1.01
HNRNPC-221ENST00000555883 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
HNRNPC-221ENST00000555883 MAGI3Q5TCQ9 1506 aa21.29■■□□□ 1
HNRNPC-221ENST00000555883 CFAP43Q8NDM7 1665 aa21.28■■□□□ 1
HNRNPC-221ENST00000555883 KIF21BO75037 1637 aa21.27■■□□□ 1
HNRNPC-221ENST00000555883 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
HNRNPC-221ENST00000555883 ATP10BO94823 1461 aa21.25■□□□□ 0.99
HNRNPC-221ENST00000555883 CD109Q6YHK3 1445 aa21.24■□□□□ 0.99
HNRNPC-221ENST00000555883 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
HNRNPC-221ENST00000555883 RAPGEF6Q8TEU7 1601 aa21.22■□□□□ 0.99
HNRNPC-221ENST00000555883 EFCAB5A4FU69 1503 aa21.19■□□□□ 0.98
HNRNPC-221ENST00000555883 KDM4FA0A1W2PPD8 638 aa21.19■□□□□ 0.98
HNRNPC-221ENST00000555883 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
HNRNPC-221ENST00000555883 NUP153P49790 1475 aaKnown RBP21.15■□□□□ 0.98
HNRNPC-221ENST00000555883 ABCA9Q8IUA7 1624 aa21.15■□□□□ 0.98
HNRNPC-221ENST00000555883 FHOD3Q2V2M9 1422 aa21.14■□□□□ 0.98
HNRNPC-221ENST00000555883 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
HNRNPC-221ENST00000555883 ARAP3Q8WWN8 1544 aa21.12■□□□□ 0.97
HNRNPC-221ENST00000555883 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
HNRNPC-221ENST00000555883 ADGRL1O94910 1474 aa21.07■□□□□ 0.96
HNRNPC-221ENST00000555883 NEO1Q92859 1461 aa21.05■□□□□ 0.96
HNRNPC-221ENST00000555883 RANGAP1P46060 587 aaPredicted RBP21.04■□□□□ 0.96
HNRNPC-221ENST00000555883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.03■□□□□ 0.96
HNRNPC-221ENST00000555883 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
HNRNPC-221ENST00000555883 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
HNRNPC-221ENST00000555883 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
HNRNPC-221ENST00000555883 FMN1Q68DA7 1419 aa21■□□□□ 0.95
HNRNPC-221ENST00000555883 ARHGAP35Q9NRY4 1499 aa20.97■□□□□ 0.95
HNRNPC-221ENST00000555883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.93■□□□□ 0.941e-13■■■□□ 15.2
HNRNPC-221ENST00000555883 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
HNRNPC-221ENST00000555883 CFAP74Q9C0B2 1584 aa20.92■□□□□ 0.94
HNRNPC-221ENST00000555883 CDK13Q14004 1512 aaKnown RBP20.9■□□□□ 0.94
HNRNPC-221ENST00000555883 FRMPD1Q5SYB0 1578 aa20.89■□□□□ 0.94
HNRNPC-221ENST00000555883 FANCAO15360 1455 aa20.88■□□□□ 0.93
HNRNPC-221ENST00000555883 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
HNRNPC-221ENST00000555883 TTC37Q6PGP7 1564 aa20.88■□□□□ 0.93
HNRNPC-221ENST00000555883 AKNAQ7Z591 1439 aa20.87■□□□□ 0.93
HNRNPC-221ENST00000555883 DENND4BO75064 1496 aaPredicted RBP20.86■□□□□ 0.93
HNRNPC-221ENST00000555883 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
HNRNPC-221ENST00000555883 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
HNRNPC-221ENST00000555883 PLCH2O75038 1416 aa20.83■□□□□ 0.93
HNRNPC-221ENST00000555883 RICTORQ6R327 1708 aa20.82■□□□□ 0.92
HNRNPC-221ENST00000555883 ZMYM4Q5VZL5 1548 aa20.81■□□□□ 0.92
HNRNPC-221ENST00000555883 ARHGEF40Q8TER5 1519 aa20.8■□□□□ 0.92
HNRNPC-221ENST00000555883 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
HNRNPC-221ENST00000555883 MAGI2Q86UL8 1455 aa20.78■□□□□ 0.92
HNRNPC-221ENST00000555883 ADAMTSL3P82987 1691 aa20.77■□□□□ 0.92
HNRNPC-221ENST00000555883 KIF14Q15058 1648 aa20.77■□□□□ 0.92
HNRNPC-221ENST00000555883 CLIP1P30622 1438 aa20.77■□□□□ 0.91
HNRNPC-221ENST00000555883 CASKIN1Q8WXD9 1431 aa20.77■□□□□ 0.91
HNRNPC-221ENST00000555883 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
HNRNPC-221ENST00000555883 CCDC18Q5T9S5 1454 aa20.75■□□□□ 0.91
HNRNPC-221ENST00000555883 POGZQ7Z3K3 1410 aa20.74■□□□□ 0.91
HNRNPC-221ENST00000555883 HECW2Q9P2P5 1572 aa20.74■□□□□ 0.91
HNRNPC-221ENST00000555883 MYO5CQ9NQX4 1742 aa20.73■□□□□ 0.91
HNRNPC-221ENST00000555883 BCORL1Q5H9F3 1711 aa20.73■□□□□ 0.91
HNRNPC-221ENST00000555883 EFCAB2Q5VUJ9 269 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms