RNA–Protein interactions for RNA: ENST00000555832.1

XRCC3-214, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-214ENST00000555832 KIAA0586Q9BVV6 1533 aa28.55■■■□□ 2.16
XRCC3-214ENST00000555832 JPH4Q96JJ6 628 aa28.54■■■□□ 2.16
XRCC3-214ENST00000555832 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.15
XRCC3-214ENST00000555832 PRXQ9BXM0 1461 aa28.45■■■□□ 2.14
XRCC3-214ENST00000555832 PRG4Q92954 1404 aaPredicted RBP28.44■■■□□ 2.14
XRCC3-214ENST00000555832 SHROOM2Q13796 1616 aa28.44■■■□□ 2.14
XRCC3-214ENST00000555832 ARAP1Q96P48 1450 aa28.42■■■□□ 2.14
XRCC3-214ENST00000555832 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
XRCC3-214ENST00000555832 CARMIL2Q6F5E8 1435 aa28.36■■■□□ 2.13
XRCC3-214ENST00000555832 IQGAP2Q13576 1575 aa28.36■■■□□ 2.13
XRCC3-214ENST00000555832 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
XRCC3-214ENST00000555832 CTTNBP2Q8WZ74 1663 aa28.21■■■□□ 2.11
XRCC3-214ENST00000555832 UGGT2Q9NYU1 1516 aa28.2■■■□□ 2.1
XRCC3-214ENST00000555832 GOLGA3Q08378 1498 aa28.2■■■□□ 2.1
XRCC3-214ENST00000555832 KIF21BO75037 1637 aa28.19■■■□□ 2.1
XRCC3-214ENST00000555832 TNIKQ9UKE5 1360 aa28.19■■■□□ 2.1
XRCC3-214ENST00000555832 PTPRGP23470 1445 aa28.17■■■□□ 2.1
XRCC3-214ENST00000555832 NPM1P06748 294 aaKnown RBP eCLIP28.14■■■□□ 2.1
XRCC3-214ENST00000555832 UBTFP17480 764 aaKnown RBP28.12■■■□□ 2.09
XRCC3-214ENST00000555832 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.09
XRCC3-214ENST00000555832 DISP1Q96F81 1524 aa28.08■■■□□ 2.08
XRCC3-214ENST00000555832 KIAA0556O60303 1618 aa28.03■■■□□ 2.08
XRCC3-214ENST00000555832 TRHP20396 242 aaPredicted RBP28■■■□□ 2.07
XRCC3-214ENST00000555832 EHMT2Q96KQ7 1210 aa27.98■■■□□ 2.07
XRCC3-214ENST00000555832 UACAQ9BZF9 1416 aa27.95■■■□□ 2.07
XRCC3-214ENST00000555832 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
XRCC3-214ENST00000555832 UHRF1BP1LA0JNW5 1464 aa27.89■■■□□ 2.06
XRCC3-214ENST00000555832 P3H3Q8IVL6 736 aa27.89■■■□□ 2.06
XRCC3-214ENST00000555832 EFCAB5A4FU69 1503 aa27.87■■■□□ 2.05
XRCC3-214ENST00000555832 ADCY10Q96PN6 1610 aa27.86■■■□□ 2.05
XRCC3-214ENST00000555832 ABCC2Q92887 1545 aa27.85■■■□□ 2.05
XRCC3-214ENST00000555832 SAMD9Q5K651 1589 aa27.85■■■□□ 2.05
XRCC3-214ENST00000555832 MAPKBP1O60336 1514 aa27.78■■■□□ 2.04
XRCC3-214ENST00000555832 PLB1Q6P1J6 1458 aa27.76■■■□□ 2.03
XRCC3-214ENST00000555832 KDM5BQ9UGL1 1544 aa27.73■■■□□ 2.03
XRCC3-214ENST00000555832 FHOD3Q2V2M9 1422 aa27.73■■■□□ 2.03
XRCC3-214ENST00000555832 ABCA8O94911 1581 aa27.72■■■□□ 2.03
XRCC3-214ENST00000555832 FMN1Q68DA7 1419 aa27.68■■■□□ 2.02
XRCC3-214ENST00000555832 FAM69CQ0P6D2 419 aa27.67■■■□□ 2.02
XRCC3-214ENST00000555832 ABCC10Q5T3U5 1492 aa27.66■■■□□ 2.02
XRCC3-214ENST00000555832 ASXL2Q76L83 1435 aa27.65■■■□□ 2.02
XRCC3-214ENST00000555832 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.01
XRCC3-214ENST00000555832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.63■■■□□ 2.01
XRCC3-214ENST00000555832 HNRNPUL2Q1KMD3 747 aaKnown RBP27.63■■■□□ 2.01
XRCC3-214ENST00000555832 RAPGEF6Q8TEU7 1601 aa27.62■■■□□ 2.01
XRCC3-214ENST00000555832 ZCCHC11Q5TAX3 1644 aaKnown RBP27.6■■■□□ 2.01
XRCC3-214ENST00000555832 CLIP1P30622 1438 aa27.6■■■□□ 2.01
XRCC3-214ENST00000555832 ATP1B4Q9UN42 357 aaPredicted RBP27.55■■■□□ 2
XRCC3-214ENST00000555832 WDR7Q9Y4E6 1490 aa27.55■■■□□ 2
XRCC3-214ENST00000555832 DIP2BQ9P265 1576 aa27.53■■■□□ 2
XRCC3-214ENST00000555832 ATP10BO94823 1461 aa27.53■■■□□ 2
XRCC3-214ENST00000555832 ARID3CA6NKF2 412 aa27.53■■■□□ 2
XRCC3-214ENST00000555832 NUP153P49790 1475 aaKnown RBP27.5■■□□□ 1.99
XRCC3-214ENST00000555832 PLEKHD1A6NEE1 506 aa27.49■■□□□ 1.99
XRCC3-214ENST00000555832 CDK11AQ9UQ88 783 aaPredicted RBP27.49■■□□□ 1.99
XRCC3-214ENST00000555832 LOC105371045A0A1W2PR82 267 aa27.47■■□□□ 1.99
XRCC3-214ENST00000555832 GLI2P10070 1586 aa27.47■■□□□ 1.99
XRCC3-214ENST00000555832 EPRSP07814 1512 aaKnown RBP27.46■■□□□ 1.99
XRCC3-214ENST00000555832 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
XRCC3-214ENST00000555832 CEP162Q5TB80 1403 aa27.46■■□□□ 1.99
XRCC3-214ENST00000555832 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
XRCC3-214ENST00000555832 HECW1Q76N89 1606 aa27.45■■□□□ 1.99
XRCC3-214ENST00000555832 CASKIN1Q8WXD9 1431 aa27.39■■□□□ 1.97
XRCC3-214ENST00000555832 TEX14Q8IWB6 1497 aa27.35■■□□□ 1.97
XRCC3-214ENST00000555832 CCDC18Q5T9S5 1454 aa27.34■■□□□ 1.97
XRCC3-214ENST00000555832 FYCO1Q9BQS8 1478 aa27.34■■□□□ 1.97
XRCC3-214ENST00000555832 CD109Q6YHK3 1445 aa27.32■■□□□ 1.96
XRCC3-214ENST00000555832 CDK13Q14004 1512 aaKnown RBP27.28■■□□□ 1.96
XRCC3-214ENST00000555832 CFAP43Q8NDM7 1665 aa27.27■■□□□ 1.96
XRCC3-214ENST00000555832 MAP3K4Q9Y6R4 1608 aa27.27■■□□□ 1.96
XRCC3-214ENST00000555832 PCF11O94913 1555 aaKnown RBP27.26■■□□□ 1.96
XRCC3-214ENST00000555832 TSPOAP1O95153 1857 aa27.24■■□□□ 1.95
XRCC3-214ENST00000555832 MAGI3Q5TCQ9 1506 aa27.23■■□□□ 1.95
XRCC3-214ENST00000555832 ABCA9Q8IUA7 1624 aa27.2■■□□□ 1.95
XRCC3-214ENST00000555832 PHLDB1Q86UU1 1377 aa27.2■■□□□ 1.94
XRCC3-214ENST00000555832 TROQ12816 1431 aaPredicted RBP27.19■■□□□ 1.94
XRCC3-214ENST00000555832 VPS8Q8N3P4 1428 aa27.16■■□□□ 1.94
XRCC3-214ENST00000555832 KDM6BO15054 1643 aa27.15■■□□□ 1.94
XRCC3-214ENST00000555832 KIF14Q15058 1648 aa27.11■■□□□ 1.93
XRCC3-214ENST00000555832 MTUS2Q5JR59 1369 aa27.1■■□□□ 1.93
XRCC3-214ENST00000555832 APLP2Q06481 763 aa27.1■■□□□ 1.93
XRCC3-214ENST00000555832 PPRC1Q5VV67 1664 aaKnown RBP27.1■■□□□ 1.93
XRCC3-214ENST00000555832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.08■■□□□ 1.93
XRCC3-214ENST00000555832 NEO1Q92859 1461 aa27.07■■□□□ 1.92
XRCC3-214ENST00000555832 EFCAB2Q5VUJ9 269 aa27.04■■□□□ 1.92
XRCC3-214ENST00000555832 LRRIQ1Q96JM4 1722 aa27.03■■□□□ 1.92
XRCC3-214ENST00000555832 CFAP74Q9C0B2 1584 aa27.02■■□□□ 1.92
XRCC3-214ENST00000555832 PLCH2O75038 1416 aa27.02■■□□□ 1.92
XRCC3-214ENST00000555832 FANCAO15360 1455 aa27■■□□□ 1.91
XRCC3-214ENST00000555832 TTC37Q6PGP7 1564 aa26.99■■□□□ 1.91
XRCC3-214ENST00000555832 ARAP3Q8WWN8 1544 aa26.99■■□□□ 1.91
XRCC3-214ENST00000555832 EHBP1L1Q8N3D4 1523 aa26.95■■□□□ 1.91
XRCC3-214ENST00000555832 AKNAQ7Z591 1439 aa26.95■■□□□ 1.9
XRCC3-214ENST00000555832 MYO5CQ9NQX4 1742 aa26.93■■□□□ 1.9
XRCC3-214ENST00000555832 MAP3K1Q13233 1512 aa26.93■■□□□ 1.9
XRCC3-214ENST00000555832 CCNB3Q8WWL7 1395 aa26.92■■□□□ 1.9
XRCC3-214ENST00000555832 ARHGAP5Q13017 1502 aa26.91■■□□□ 1.9
XRCC3-214ENST00000555832 TIAM1Q13009 1591 aa26.9■■□□□ 1.9
XRCC3-214ENST00000555832 COL17A1Q9UMD9 1497 aaPredicted RBP26.9■■□□□ 1.9
XRCC3-214ENST00000555832 DENND4BO75064 1496 aaPredicted RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms