RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 IGF1RP08069 1367 aa23.86■■□□□ 1.41
SDR39U1-214ENST00000555778 JPH4Q96JJ6 628 aa23.75■■□□□ 1.39
SDR39U1-214ENST00000555778 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
SDR39U1-214ENST00000555778 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
SDR39U1-214ENST00000555778 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
SDR39U1-214ENST00000555778 IQGAP2Q13576 1575 aa23.67■■□□□ 1.38
SDR39U1-214ENST00000555778 KIF13AQ9H1H9 1805 aa23.63■■□□□ 1.37
SDR39U1-214ENST00000555778 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
SDR39U1-214ENST00000555778 RAPGEF2Q9Y4G8 1499 aa23.58■■□□□ 1.37
SDR39U1-214ENST00000555778 CTTNBP2Q8WZ74 1663 aa23.56■■□□□ 1.36
SDR39U1-214ENST00000555778 MAPKBP1O60336 1514 aa23.5■■□□□ 1.35
SDR39U1-214ENST00000555778 DISP1Q96F81 1524 aa23.5■■□□□ 1.35
SDR39U1-214ENST00000555778 DIP2BQ9P265 1576 aa23.49■■□□□ 1.35
SDR39U1-214ENST00000555778 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
SDR39U1-214ENST00000555778 KIAA0556O60303 1618 aa23.48■■□□□ 1.35
SDR39U1-214ENST00000555778 PTPRGP23470 1445 aa23.47■■□□□ 1.35
SDR39U1-214ENST00000555778 UGGT2Q9NYU1 1516 aa23.45■■□□□ 1.34
SDR39U1-214ENST00000555778 TNIKQ9UKE5 1360 aa23.45■■□□□ 1.34
SDR39U1-214ENST00000555778 ABCC10Q5T3U5 1492 aa23.42■■□□□ 1.34
SDR39U1-214ENST00000555778 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
SDR39U1-214ENST00000555778 PRXQ9BXM0 1461 aa23.39■■□□□ 1.34
SDR39U1-214ENST00000555778 TSPOAP1O95153 1857 aa23.39■■□□□ 1.33
SDR39U1-214ENST00000555778 ABCC2Q92887 1545 aa23.38■■□□□ 1.33
SDR39U1-214ENST00000555778 FAM69CQ0P6D2 419 aa23.35■■□□□ 1.33
SDR39U1-214ENST00000555778 ZCCHC11Q5TAX3 1644 aaKnown RBP23.32■■□□□ 1.32
SDR39U1-214ENST00000555778 UACAQ9BZF9 1416 aa23.32■■□□□ 1.32
SDR39U1-214ENST00000555778 UHRF1BP1LA0JNW5 1464 aa23.3■■□□□ 1.32
SDR39U1-214ENST00000555778 ASXL2Q76L83 1435 aa23.28■■□□□ 1.32
SDR39U1-214ENST00000555778 PLB1Q6P1J6 1458 aa23.26■■□□□ 1.31
SDR39U1-214ENST00000555778 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
SDR39U1-214ENST00000555778 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
SDR39U1-214ENST00000555778 KDM6BO15054 1643 aa23.22■■□□□ 1.31
SDR39U1-214ENST00000555778 PPRC1Q5VV67 1664 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-214ENST00000555778 FAM9AQ8IZU1 332 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-214ENST00000555778 ABCA8O94911 1581 aa23.19■■□□□ 1.3
SDR39U1-214ENST00000555778 CSRNP3Q8WYN3 585 aa23.17■■□□□ 1.3
SDR39U1-214ENST00000555778 GLI2P10070 1586 aa23.15■■□□□ 1.3
SDR39U1-214ENST00000555778 SAMD9Q5K651 1589 aa23.15■■□□□ 1.3
SDR39U1-214ENST00000555778 EEA1Q15075 1411 aa23.15■■□□□ 1.3
SDR39U1-214ENST00000555778 EPRSP07814 1512 aaKnown RBP23.14■■□□□ 1.3
SDR39U1-214ENST00000555778 MAP3K4Q9Y6R4 1608 aa23.14■■□□□ 1.29
SDR39U1-214ENST00000555778 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
SDR39U1-214ENST00000555778 WDR7Q9Y4E6 1490 aa23.11■■□□□ 1.29
SDR39U1-214ENST00000555778 KIF21BO75037 1637 aa23.1■■□□□ 1.29
SDR39U1-214ENST00000555778 ARID3CA6NKF2 412 aa23.09■■□□□ 1.29
SDR39U1-214ENST00000555778 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
SDR39U1-214ENST00000555778 EHMT2Q96KQ7 1210 aa23.05■■□□□ 1.28
SDR39U1-214ENST00000555778 RAPGEF6Q8TEU7 1601 aa23.03■■□□□ 1.28
SDR39U1-214ENST00000555778 FHOD3Q2V2M9 1422 aa23.02■■□□□ 1.28
SDR39U1-214ENST00000555778 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
SDR39U1-214ENST00000555778 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
SDR39U1-214ENST00000555778 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
SDR39U1-214ENST00000555778 TEX14Q8IWB6 1497 aa22.95■■□□□ 1.26
SDR39U1-214ENST00000555778 ATP10BO94823 1461 aa22.94■■□□□ 1.26
SDR39U1-214ENST00000555778 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
SDR39U1-214ENST00000555778 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
SDR39U1-214ENST00000555778 EFCAB5A4FU69 1503 aa22.92■■□□□ 1.26
SDR39U1-214ENST00000555778 NUP153P49790 1475 aaKnown RBP22.91■■□□□ 1.26
SDR39U1-214ENST00000555778 CD109Q6YHK3 1445 aa22.88■■□□□ 1.25
SDR39U1-214ENST00000555778 MAGI3Q5TCQ9 1506 aa22.85■■□□□ 1.25
SDR39U1-214ENST00000555778 ABCA9Q8IUA7 1624 aa22.84■■□□□ 1.25
SDR39U1-214ENST00000555778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.81■■□□□ 1.24
SDR39U1-214ENST00000555778 UBTFP17480 764 aaKnown RBP22.81■■□□□ 1.24
SDR39U1-214ENST00000555778 HNRNPUL2Q1KMD3 747 aaKnown RBP22.81■■□□□ 1.24
SDR39U1-214ENST00000555778 CDK13Q14004 1512 aaKnown RBP22.8■■□□□ 1.24
SDR39U1-214ENST00000555778 ARHGAP35Q9NRY4 1499 aa22.76■■□□□ 1.23
SDR39U1-214ENST00000555778 ADGRL1O94910 1474 aa22.75■■□□□ 1.23
SDR39U1-214ENST00000555778 KDM4FA0A1W2PPD8 638 aa22.75■■□□□ 1.23
SDR39U1-214ENST00000555778 TTC37Q6PGP7 1564 aa22.73■■□□□ 1.23
SDR39U1-214ENST00000555778 HECW1Q76N89 1606 aa22.72■■□□□ 1.23
SDR39U1-214ENST00000555778 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
SDR39U1-214ENST00000555778 FRMPD1Q5SYB0 1578 aa22.67■■□□□ 1.22
SDR39U1-214ENST00000555778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.67■■□□□ 1.22
SDR39U1-214ENST00000555778 ARAP3Q8WWN8 1544 aa22.66■■□□□ 1.22
SDR39U1-214ENST00000555778 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
SDR39U1-214ENST00000555778 PCF11O94913 1555 aaKnown RBP22.64■■□□□ 1.22
SDR39U1-214ENST00000555778 ATP1B4Q9UN42 357 aaPredicted RBP22.64■■□□□ 1.21
SDR39U1-214ENST00000555778 KIF14Q15058 1648 aa22.6■■□□□ 1.21
SDR39U1-214ENST00000555778 NEO1Q92859 1461 aa22.6■■□□□ 1.21
SDR39U1-214ENST00000555778 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
SDR39U1-214ENST00000555778 PLEKHD1A6NEE1 506 aa22.59■■□□□ 1.21
SDR39U1-214ENST00000555778 RICTORQ6R327 1708 aa22.57■■□□□ 1.2
SDR39U1-214ENST00000555778 FANCAO15360 1455 aa22.56■■□□□ 1.2
SDR39U1-214ENST00000555778 RAPGEF3O95398 923 aa22.56■■□□□ 1.2
SDR39U1-214ENST00000555778 MYO5CQ9NQX4 1742 aa22.54■■□□□ 1.2
SDR39U1-214ENST00000555778 ARHGEF40Q8TER5 1519 aa22.52■■□□□ 1.2
SDR39U1-214ENST00000555778 PHLDB1Q86UU1 1377 aa22.5■■□□□ 1.19
SDR39U1-214ENST00000555778 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
SDR39U1-214ENST00000555778 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
SDR39U1-214ENST00000555778 CLIP1P30622 1438 aa22.47■■□□□ 1.19
SDR39U1-214ENST00000555778 TROQ12816 1431 aaPredicted RBP22.45■■□□□ 1.18
SDR39U1-214ENST00000555778 CASKIN1Q8WXD9 1431 aa22.45■■□□□ 1.18
SDR39U1-214ENST00000555778 SIGLEC1Q9BZZ2 1709 aa22.43■■□□□ 1.18
SDR39U1-214ENST00000555778 FYCO1Q9BQS8 1478 aa22.43■■□□□ 1.18
SDR39U1-214ENST00000555778 ZMYM4Q5VZL5 1548 aa22.42■■□□□ 1.18
SDR39U1-214ENST00000555778 CCDC18Q5T9S5 1454 aa22.42■■□□□ 1.18
SDR39U1-214ENST00000555778 HECW2Q9P2P5 1572 aa22.42■■□□□ 1.18
SDR39U1-214ENST00000555778 PLCH2O75038 1416 aa22.41■■□□□ 1.18
SDR39U1-214ENST00000555778 BCORL1Q5H9F3 1711 aa22.41■■□□□ 1.18
SDR39U1-214ENST00000555778 ARHGAP5Q13017 1502 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms