RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 IGF1RP08069 1367 aa15.72■□□□□ 0.11
SIX1-204ENST00000555627 TDRD9Q8NDG6 1382 aaKnown RBP15.69■□□□□ 0.1
SIX1-204ENST00000555627 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.1
SIX1-204ENST00000555627 TNIKQ9UKE5 1360 aa15.66■□□□□ 0.1
SIX1-204ENST00000555627 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
SIX1-204ENST00000555627 FBLN2P98095 1184 aa15.63■□□□□ 0.09
SIX1-204ENST00000555627 CEP162Q5TB80 1403 aa15.62■□□□□ 0.09
SIX1-204ENST00000555627 SNAPC4Q5SXM2 1469 aa15.62■□□□□ 0.09
SIX1-204ENST00000555627 LMTK3Q96Q04 1460 aa15.62■□□□□ 0.09
SIX1-204ENST00000555627 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
SIX1-204ENST00000555627 FBXO41Q8TF61 875 aa15.61■□□□□ 0.09
SIX1-204ENST00000555627 ERCC6L2Q5T890 1561 aa15.61■□□□□ 0.09
SIX1-204ENST00000555627 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
SIX1-204ENST00000555627 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
SIX1-204ENST00000555627 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.08
SIX1-204ENST00000555627 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
SIX1-204ENST00000555627 FOXD1Q16676 465 aa15.54■□□□□ 0.08
SIX1-204ENST00000555627 HECW2Q9P2P5 1572 aa15.53■□□□□ 0.08
SIX1-204ENST00000555627 SOCS7O14512 581 aa15.52■□□□□ 0.08
SIX1-204ENST00000555627 SAMD9Q5K651 1589 aa15.52■□□□□ 0.07
SIX1-204ENST00000555627 CEP170Q5SW79 1584 aa15.52■□□□□ 0.07
SIX1-204ENST00000555627 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
SIX1-204ENST00000555627 SYNJ2O15056 1496 aa15.51■□□□□ 0.07
SIX1-204ENST00000555627 CLIP1P30622 1438 aa15.49■□□□□ 0.07
SIX1-204ENST00000555627 IQGAP2Q13576 1575 aa15.49■□□□□ 0.07
SIX1-204ENST00000555627 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
SIX1-204ENST00000555627 EFCAB5A4FU69 1503 aa15.47■□□□□ 0.07
SIX1-204ENST00000555627 KIF13AQ9H1H9 1805 aa15.45■□□□□ 0.06
SIX1-204ENST00000555627 UBTFP17480 764 aaKnown RBP15.45■□□□□ 0.06
SIX1-204ENST00000555627 NUP160Q12769 1436 aa15.43■□□□□ 0.06
SIX1-204ENST00000555627 ILDR2Q71H61 639 aa15.41■□□□□ 0.06
SIX1-204ENST00000555627 UGGT2Q9NYU1 1516 aa15.4■□□□□ 0.06
SIX1-204ENST00000555627 PCF11O94913 1555 aaKnown RBP15.4■□□□□ 0.06
SIX1-204ENST00000555627 VPS8Q8N3P4 1428 aa15.39■□□□□ 0.05
SIX1-204ENST00000555627 LRRIQ1Q96JM4 1722 aa15.39■□□□□ 0.05
SIX1-204ENST00000555627 KIAA0556O60303 1618 aa15.38■□□□□ 0.05
SIX1-204ENST00000555627 SHROOM2Q13796 1616 aa15.37■□□□□ 0.05
SIX1-204ENST00000555627 CFAP43Q8NDM7 1665 aa15.37■□□□□ 0.05
SIX1-204ENST00000555627 KIAA0586Q9BVV6 1533 aa15.36■□□□□ 0.05
SIX1-204ENST00000555627 KDM6BO15054 1643 aa15.34■□□□□ 0.05
SIX1-204ENST00000555627 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
SIX1-204ENST00000555627 DISP1Q96F81 1524 aa15.32■□□□□ 0.04
SIX1-204ENST00000555627 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
SIX1-204ENST00000555627 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
SIX1-204ENST00000555627 DISP3Q9P2K9 1392 aa15.26■□□□□ 0.03
SIX1-204ENST00000555627 FYCO1Q9BQS8 1478 aa15.25■□□□□ 0.03
SIX1-204ENST00000555627 TIAM1Q13009 1591 aa15.24■□□□□ 0.03
SIX1-204ENST00000555627 FAM69CQ0P6D2 419 aa15.23■□□□□ 0.03
SIX1-204ENST00000555627 ABCC10Q5T3U5 1492 aa15.21■□□□□ 0.03
SIX1-204ENST00000555627 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
SIX1-204ENST00000555627 HECW1Q76N89 1606 aa15.21■□□□□ 0.02
SIX1-204ENST00000555627 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
SIX1-204ENST00000555627 RAPGEF6Q8TEU7 1601 aa15.19■□□□□ 0.02
SIX1-204ENST00000555627 CASKIN1Q8WXD9 1431 aa15.18■□□□□ 0.02
SIX1-204ENST00000555627 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
SIX1-204ENST00000555627 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
SIX1-204ENST00000555627 ABCA8O94911 1581 aa15.15■□□□□ 0.02
SIX1-204ENST00000555627 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
SIX1-204ENST00000555627 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
SIX1-204ENST00000555627 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
SIX1-204ENST00000555627 NUP153P49790 1475 aaKnown RBP15.08■□□□□ 0.01
SIX1-204ENST00000555627 CARMIL2Q6F5E8 1435 aa15.08■□□□□ 0
SIX1-204ENST00000555627 CDK13Q14004 1512 aaKnown RBP15.07■□□□□ 0
SIX1-204ENST00000555627 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
SIX1-204ENST00000555627 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
SIX1-204ENST00000555627 MAPKBP1O60336 1514 aa15.07■□□□□ 0
SIX1-204ENST00000555627 EHBP1L1Q8N3D4 1523 aa15.07■□□□□ 0
SIX1-204ENST00000555627 PLB1Q6P1J6 1458 aa15.06■□□□□ 0
SIX1-204ENST00000555627 EPRSP07814 1512 aaKnown RBP15.06■□□□□ 0
SIX1-204ENST00000555627 TSPOAP1O95153 1857 aa15.06■□□□□ 0
SIX1-204ENST00000555627 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
SIX1-204ENST00000555627 JPH4Q96JJ6 628 aa15.04■□□□□ -0
SIX1-204ENST00000555627 SUPT6HQ7KZ85 1726 aaKnown RBP15.03■□□□□ -0
SIX1-204ENST00000555627 SPATA31D1Q6ZQQ2 1576 aa15.02■□□□□ -0
SIX1-204ENST00000555627 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
SIX1-204ENST00000555627 ABCC2Q92887 1545 aa15□□□□□ -0.01
SIX1-204ENST00000555627 ZCCHC11Q5TAX3 1644 aaKnown RBP14.97□□□□□ -0.01
SIX1-204ENST00000555627 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
SIX1-204ENST00000555627 KIF14Q15058 1648 aa14.95□□□□□ -0.02
SIX1-204ENST00000555627 NPM1P06748 294 aaKnown RBP eCLIP14.95□□□□□ -0.02
SIX1-204ENST00000555627 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
SIX1-204ENST00000555627 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
SIX1-204ENST00000555627 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
SIX1-204ENST00000555627 PTPRGP23470 1445 aa14.92□□□□□ -0.02
SIX1-204ENST00000555627 MSH5O43196 834 aa14.91□□□□□ -0.02
SIX1-204ENST00000555627 UACAQ9BZF9 1416 aa14.91□□□□□ -0.02
SIX1-204ENST00000555627 TTBK1Q5TCY1 1321 aaPredicted RBP14.91□□□□□ -0.02
SIX1-204ENST00000555627 ITSN2Q9NZM3 1697 aa14.9□□□□□ -0.02
SIX1-204ENST00000555627 NCOA2Q15596 1464 aa14.9□□□□□ -0.02
SIX1-204ENST00000555627 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
SIX1-204ENST00000555627 ATP10BO94823 1461 aa14.89□□□□□ -0.03
SIX1-204ENST00000555627 PHLDB1Q86UU1 1377 aa14.89□□□□□ -0.03
SIX1-204ENST00000555627 KDM5BQ9UGL1 1544 aa14.87□□□□□ -0.03
SIX1-204ENST00000555627 APLP2Q06481 763 aa14.87□□□□□ -0.03
SIX1-204ENST00000555627 TROQ12816 1431 aaPredicted RBP14.86□□□□□ -0.03
SIX1-204ENST00000555627 COL17A1Q9UMD9 1497 aaPredicted RBP14.86□□□□□ -0.03
SIX1-204ENST00000555627 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
SIX1-204ENST00000555627 PPRC1Q5VV67 1664 aaKnown RBP14.85□□□□□ -0.03
SIX1-204ENST00000555627 PREX2Q70Z35 1606 aa14.84□□□□□ -0.03
SIX1-204ENST00000555627 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms