RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
TUBB3-209ENST00000555609 FHAD1B1AJZ9 1412 aa23.65■■□□□ 1.38
TUBB3-209ENST00000555609 LRRC9Q6ZRR7 1453 aa23.58■■□□□ 1.36
TUBB3-209ENST00000555609 MYT1Q01538 1121 aa23.58■■□□□ 1.36
TUBB3-209ENST00000555609 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
TUBB3-209ENST00000555609 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
TUBB3-209ENST00000555609 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
TUBB3-209ENST00000555609 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
TUBB3-209ENST00000555609 CFAP43Q8NDM7 1665 aa23.52■■□□□ 1.36
TUBB3-209ENST00000555609 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.35
TUBB3-209ENST00000555609 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
TUBB3-209ENST00000555609 YTHDC1Q96MU7 727 aaKnown RBP23.49■■□□□ 1.35
TUBB3-209ENST00000555609 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
TUBB3-209ENST00000555609 CUL7Q14999 1698 aa23.48■■□□□ 1.35
TUBB3-209ENST00000555609 RAB3GAP2Q9H2M9 1393 aa23.48■■□□□ 1.35
TUBB3-209ENST00000555609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.48■■□□□ 1.35
TUBB3-209ENST00000555609 FYCO1Q9BQS8 1478 aa23.45■■□□□ 1.35
TUBB3-209ENST00000555609 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
TUBB3-209ENST00000555609 TOPBP1Q92547 1522 aa23.44■■□□□ 1.34
TUBB3-209ENST00000555609 CASKIN1Q8WXD9 1431 aa23.42■■□□□ 1.34
TUBB3-209ENST00000555609 TIMELESSQ9UNS1 1208 aa23.41■■□□□ 1.34
TUBB3-209ENST00000555609 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
TUBB3-209ENST00000555609 PCF11O94913 1555 aaKnown RBP23.41■■□□□ 1.34
TUBB3-209ENST00000555609 PHLDB1Q86UU1 1377 aa23.41■■□□□ 1.34
TUBB3-209ENST00000555609 WDR62O43379 1518 aa23.4■■□□□ 1.34
TUBB3-209ENST00000555609 MAPKBP1O60336 1514 aa23.4■■□□□ 1.34
TUBB3-209ENST00000555609 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
TUBB3-209ENST00000555609 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
TUBB3-209ENST00000555609 FMN1Q68DA7 1419 aa23.34■■□□□ 1.33
TUBB3-209ENST00000555609 ITGAEP38570 1179 aa23.34■■□□□ 1.33
TUBB3-209ENST00000555609 FHOD3Q2V2M9 1422 aa23.29■■□□□ 1.32
TUBB3-209ENST00000555609 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
TUBB3-209ENST00000555609 FAM50AQ14320 339 aaKnown RBP23.26■■□□□ 1.31
TUBB3-209ENST00000555609 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
TUBB3-209ENST00000555609 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
TUBB3-209ENST00000555609 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.31
TUBB3-209ENST00000555609 SAMD9Q5K651 1589 aa23.2■■□□□ 1.3
TUBB3-209ENST00000555609 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
TUBB3-209ENST00000555609 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
TUBB3-209ENST00000555609 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.29
TUBB3-209ENST00000555609 MTUS2Q5JR59 1369 aa23.11■■□□□ 1.29
TUBB3-209ENST00000555609 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
TUBB3-209ENST00000555609 HFM1A2PYH4 1435 aa23.1■■□□□ 1.29
TUBB3-209ENST00000555609 PPP1R15AO75807 674 aaPredicted RBP23.08■■□□□ 1.29
TUBB3-209ENST00000555609 SIN3AQ96ST3 1273 aa23.07■■□□□ 1.28
TUBB3-209ENST00000555609 EHBP1L1Q8N3D4 1523 aa23.07■■□□□ 1.28
TUBB3-209ENST00000555609 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
TUBB3-209ENST00000555609 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
TUBB3-209ENST00000555609 MYOM3Q5VTT5 1437 aa23.05■■□□□ 1.28
TUBB3-209ENST00000555609 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
TUBB3-209ENST00000555609 SUPT6HQ7KZ85 1726 aaKnown RBP23.03■■□□□ 1.28
TUBB3-209ENST00000555609 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
TUBB3-209ENST00000555609 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
TUBB3-209ENST00000555609 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
TUBB3-209ENST00000555609 NCOA2Q15596 1464 aa23.02■■□□□ 1.28
TUBB3-209ENST00000555609 PTPN23Q9H3S7 1636 aa23.01■■□□□ 1.27
TUBB3-209ENST00000555609 ARHGEF11O15085 1522 aa23■■□□□ 1.27
TUBB3-209ENST00000555609 SUPT16HQ9Y5B9 1047 aaKnown RBP22.99■■□□□ 1.27
TUBB3-209ENST00000555609 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
TUBB3-209ENST00000555609 UGGT2Q9NYU1 1516 aa22.97■■□□□ 1.27
TUBB3-209ENST00000555609 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
TUBB3-209ENST00000555609 TONSLQ96HA7 1378 aa22.96■■□□□ 1.27
TUBB3-209ENST00000555609 NAIPQ13075 1403 aa22.96■■□□□ 1.27
TUBB3-209ENST00000555609 PTPRKQ15262 1439 aa22.95■■□□□ 1.26
TUBB3-209ENST00000555609 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
TUBB3-209ENST00000555609 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
TUBB3-209ENST00000555609 AKNAQ7Z591 1439 aa22.93■■□□□ 1.26
TUBB3-209ENST00000555609 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
TUBB3-209ENST00000555609 HECW1Q76N89 1606 aa22.91■■□□□ 1.26
TUBB3-209ENST00000555609 MIA2Q96PC5 1412 aa22.87■■□□□ 1.25
TUBB3-209ENST00000555609 IQGAP2Q13576 1575 aa22.85■■□□□ 1.25
TUBB3-209ENST00000555609 ANP32CO43423 234 aa22.85■■□□□ 1.25
TUBB3-209ENST00000555609 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
TUBB3-209ENST00000555609 GCC2Q8IWJ2 1684 aa22.83■■□□□ 1.25
TUBB3-209ENST00000555609 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
TUBB3-209ENST00000555609 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
TUBB3-209ENST00000555609 EPRSP07814 1512 aaKnown RBP22.8■■□□□ 1.24
TUBB3-209ENST00000555609 KCNH8Q96L42 1107 aa22.79■■□□□ 1.24
TUBB3-209ENST00000555609 KDM5BQ9UGL1 1544 aa22.75■■□□□ 1.23
TUBB3-209ENST00000555609 ROCK1Q13464 1354 aa22.71■■□□□ 1.23
TUBB3-209ENST00000555609 FBLN2P98095 1184 aa22.67■■□□□ 1.22
TUBB3-209ENST00000555609 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
TUBB3-209ENST00000555609 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.22
TUBB3-209ENST00000555609 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
TUBB3-209ENST00000555609 DENND4BO75064 1496 aaPredicted RBP22.64■■□□□ 1.21
TUBB3-209ENST00000555609 NEFLP07196 543 aa22.62■■□□□ 1.21
TUBB3-209ENST00000555609 CHD1O14646 1710 aa22.62■■□□□ 1.21
TUBB3-209ENST00000555609 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
TUBB3-209ENST00000555609 MPHOSPH9Q99550 1183 aa22.61■■□□□ 1.21
TUBB3-209ENST00000555609 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
TUBB3-209ENST00000555609 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
TUBB3-209ENST00000555609 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
TUBB3-209ENST00000555609 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.21
TUBB3-209ENST00000555609 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.21
TUBB3-209ENST00000555609 DAPK1P53355 1430 aa22.58■■□□□ 1.2
TUBB3-209ENST00000555609 EIF4G2P78344 907 aaKnown RBP eCLIP22.58■■□□□ 1.2
TUBB3-209ENST00000555609 CHIC2Q9UKJ5 165 aa22.58■■□□□ 1.2
TUBB3-209ENST00000555609 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
TUBB3-209ENST00000555609 FKBP8Q14318 412 aa22.57■■□□□ 1.2
TUBB3-209ENST00000555609 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms