RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 JPH4Q96JJ6 628 aa36.87■■■■□ 3.49
SYNE2-218ENST00000555241 PRG4Q92954 1404 aaPredicted RBP36.86■■■■□ 3.49
SYNE2-218ENST00000555241 KIAA0586Q9BVV6 1533 aa36.85■■■■□ 3.49
SYNE2-218ENST00000555241 TRHP20396 242 aaPredicted RBP36.71■■■■□ 3.47
SYNE2-218ENST00000555241 RAPGEF2Q9Y4G8 1499 aa36.66■■■■□ 3.46
SYNE2-218ENST00000555241 IQGAP2Q13576 1575 aa36.62■■■■□ 3.45
SYNE2-218ENST00000555241 CTTNBP2Q8WZ74 1663 aa36.47■■■■□ 3.43
SYNE2-218ENST00000555241 CARMIL2Q6F5E8 1435 aa36.46■■■■□ 3.43
SYNE2-218ENST00000555241 ADCY10Q96PN6 1610 aa36.43■■■■□ 3.42
SYNE2-218ENST00000555241 PRXQ9BXM0 1461 aa36.43■■■■□ 3.42
SYNE2-218ENST00000555241 UGGT2Q9NYU1 1516 aa36.39■■■■□ 3.42
SYNE2-218ENST00000555241 PTPRGP23470 1445 aa36.36■■■■□ 3.41
SYNE2-218ENST00000555241 TNIKQ9UKE5 1360 aa36.36■■■■□ 3.41
SYNE2-218ENST00000555241 DISP1Q96F81 1524 aa36.35■■■■□ 3.41
SYNE2-218ENST00000555241 KIF13AQ9H1H9 1805 aa36.31■■■■□ 3.4
SYNE2-218ENST00000555241 MAPKBP1O60336 1514 aa36.29■■■■□ 3.4
SYNE2-218ENST00000555241 NPM1P06748 294 aaKnown RBP eCLIP36.29■■■■□ 3.4
SYNE2-218ENST00000555241 KIAA0556O60303 1618 aa36.28■■■■□ 3.4
SYNE2-218ENST00000555241 EEA1Q15075 1411 aa36.27■■■■□ 3.4
SYNE2-218ENST00000555241 CSRNP3Q8WYN3 585 aa36.24■■■■□ 3.39
SYNE2-218ENST00000555241 TTBK1Q5TCY1 1321 aaPredicted RBP36.2■■■■□ 3.39
SYNE2-218ENST00000555241 UHRF1BP1LA0JNW5 1464 aa36.15■■■■□ 3.38
SYNE2-218ENST00000555241 GOLGA3Q08378 1498 aa36.15■■■■□ 3.38
SYNE2-218ENST00000555241 ABCC10Q5T3U5 1492 aa36.14■■■■□ 3.38
SYNE2-218ENST00000555241 ABCC2Q92887 1545 aa36.13■■■■□ 3.38
SYNE2-218ENST00000555241 UACAQ9BZF9 1416 aa36.12■■■■□ 3.37
SYNE2-218ENST00000555241 DIP2BQ9P265 1576 aa36.11■■■■□ 3.37
SYNE2-218ENST00000555241 CHIC1Q5VXU3 224 aa36.05■■■■□ 3.36
SYNE2-218ENST00000555241 FAM69CQ0P6D2 419 aa36.02■■■■□ 3.36
SYNE2-218ENST00000555241 KIF21BO75037 1637 aa35.98■■■■□ 3.35
SYNE2-218ENST00000555241 KDM5BQ9UGL1 1544 aa35.98■■■■□ 3.35
SYNE2-218ENST00000555241 FAM9AQ8IZU1 332 aaPredicted RBP35.97■■■■□ 3.35
SYNE2-218ENST00000555241 ZCCHC11Q5TAX3 1644 aaKnown RBP35.94■■■■□ 3.34
SYNE2-218ENST00000555241 PLB1Q6P1J6 1458 aa35.93■■■■□ 3.34
SYNE2-218ENST00000555241 ASXL2Q76L83 1435 aa35.92■■■■□ 3.34
SYNE2-218ENST00000555241 SAMD9Q5K651 1589 aa35.91■■■■□ 3.34
SYNE2-218ENST00000555241 ABCA8O94911 1581 aa35.9■■■■□ 3.34
SYNE2-218ENST00000555241 TSPOAP1O95153 1857 aa35.88■■■■□ 3.33
SYNE2-218ENST00000555241 GLI2P10070 1586 aa35.83■■■■□ 3.33
SYNE2-218ENST00000555241 P3H3Q8IVL6 736 aa35.75■■■■□ 3.31
SYNE2-218ENST00000555241 EPRSP07814 1512 aaKnown RBP35.73■■■■□ 3.31
SYNE2-218ENST00000555241 WDR7Q9Y4E6 1490 aa35.7■■■■□ 3.31
SYNE2-218ENST00000555241 PPRC1Q5VV67 1664 aaKnown RBP35.69■■■■□ 3.3
SYNE2-218ENST00000555241 MAP3K4Q9Y6R4 1608 aa35.68■■■■□ 3.3
SYNE2-218ENST00000555241 EFCAB5A4FU69 1503 aa35.66■■■■□ 3.3
SYNE2-218ENST00000555241 KDM6BO15054 1643 aa35.65■■■■□ 3.3
SYNE2-218ENST00000555241 RAPGEF6Q8TEU7 1601 aa35.65■■■■□ 3.3
SYNE2-218ENST00000555241 RANGAP1P46060 587 aaPredicted RBP35.61■■■■□ 3.29
SYNE2-218ENST00000555241 FHOD3Q2V2M9 1422 aa35.59■■■■□ 3.29
SYNE2-218ENST00000555241 ATP10BO94823 1461 aa35.55■■■■□ 3.28
SYNE2-218ENST00000555241 UBTFP17480 764 aaKnown RBP35.55■■■■□ 3.28
SYNE2-218ENST00000555241 CFAP43Q8NDM7 1665 aa35.53■■■■□ 3.28
SYNE2-218ENST00000555241 TEX14Q8IWB6 1497 aa35.5■■■■□ 3.27
SYNE2-218ENST00000555241 EHMT2Q96KQ7 1210 aa35.5■■■■□ 3.27
SYNE2-218ENST00000555241 NUP153P49790 1475 aaKnown RBP35.47■■■■□ 3.27
SYNE2-218ENST00000555241 ARID3CA6NKF2 412 aa35.46■■■■□ 3.27
SYNE2-218ENST00000555241 KCNH8Q96L42 1107 aa35.43■■■■□ 3.26
SYNE2-218ENST00000555241 CD109Q6YHK3 1445 aa35.39■■■■□ 3.26
SYNE2-218ENST00000555241 MAGI3Q5TCQ9 1506 aa35.38■■■■□ 3.25
SYNE2-218ENST00000555241 ARHGAP35Q9NRY4 1499 aa35.36■■■■□ 3.25
SYNE2-218ENST00000555241 ABCA9Q8IUA7 1624 aa35.33■■■■□ 3.25
SYNE2-218ENST00000555241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.32■■■■□ 3.24
SYNE2-218ENST00000555241 HNRNPUL2Q1KMD3 747 aaKnown RBP35.32■■■■□ 3.24
SYNE2-218ENST00000555241 FMN1Q68DA7 1419 aa35.3■■■■□ 3.24
SYNE2-218ENST00000555241 COL17A1Q9UMD9 1497 aaPredicted RBP35.29■■■■□ 3.24
SYNE2-218ENST00000555241 HECW1Q76N89 1606 aa35.23■■■■□ 3.23
SYNE2-218ENST00000555241 AEBP2Q6ZN18 517 aaPredicted RBP35.19■■■■□ 3.22
SYNE2-218ENST00000555241 PLEKHD1A6NEE1 506 aa35.18■■■■□ 3.22
SYNE2-218ENST00000555241 CDK13Q14004 1512 aaKnown RBP35.16■■■■□ 3.22
SYNE2-218ENST00000555241 ARAP3Q8WWN8 1544 aa35.09■■■■□ 3.21
SYNE2-218ENST00000555241 PHLDB1Q86UU1 1377 aa35.08■■■■□ 3.21
SYNE2-218ENST00000555241 LRRIQ1Q96JM4 1722 aa35.07■■■■□ 3.2
SYNE2-218ENST00000555241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.06■■■■□ 3.2
SYNE2-218ENST00000555241 NEO1Q92859 1461 aa35.05■■■■□ 3.2
SYNE2-218ENST00000555241 ATP1B4Q9UN42 357 aaPredicted RBP35.05■■■■□ 3.2
SYNE2-218ENST00000555241 TTC37Q6PGP7 1564 aa35.02■■■■□ 3.2
SYNE2-218ENST00000555241 PCF11O94913 1555 aaKnown RBP35■■■■□ 3.19
SYNE2-218ENST00000555241 CLIP1P30622 1438 aa34.99■■■■□ 3.19
SYNE2-218ENST00000555241 CFAP74Q9C0B2 1584 aa34.97■■■■□ 3.19
SYNE2-218ENST00000555241 CASKIN1Q8WXD9 1431 aa34.97■■■■□ 3.19
SYNE2-218ENST00000555241 CDK11AQ9UQ88 783 aaPredicted RBP34.95■■■■□ 3.19
SYNE2-218ENST00000555241 KDM4FA0A1W2PPD8 638 aa34.92■■■■□ 3.18
SYNE2-218ENST00000555241 CCDC18Q5T9S5 1454 aa34.9■■■■□ 3.18
SYNE2-218ENST00000555241 KIF14Q15058 1648 aa34.89■■■■□ 3.18
SYNE2-218ENST00000555241 FANCAO15360 1455 aa34.89■■■■□ 3.18
SYNE2-218ENST00000555241 MYO5CQ9NQX4 1742 aa34.89■■■■□ 3.18
SYNE2-218ENST00000555241 FYCO1Q9BQS8 1478 aa34.88■■■■□ 3.17
SYNE2-218ENST00000555241 TROQ12816 1431 aaPredicted RBP34.88■■■■□ 3.17
SYNE2-218ENST00000555241 ADGRL1O94910 1474 aa34.85■■■■□ 3.17
SYNE2-218ENST00000555241 FRMPD1Q5SYB0 1578 aa34.85■■■■□ 3.17
SYNE2-218ENST00000555241 AKNAQ7Z591 1439 aa34.83■■■■□ 3.17
SYNE2-218ENST00000555241 RICTORQ6R327 1708 aa34.83■■■■□ 3.17
SYNE2-218ENST00000555241 PLCH2O75038 1416 aa34.81■■■■□ 3.16
SYNE2-218ENST00000555241 RAPGEF3O95398 923 aa34.8■■■■□ 3.16
SYNE2-218ENST00000555241 DENND4BO75064 1496 aaPredicted RBP34.78■■■■□ 3.16
SYNE2-218ENST00000555241 CEP162Q5TB80 1403 aa34.73■■■■□ 3.15
SYNE2-218ENST00000555241 CDC42BPBQ9Y5S2 1711 aa34.67■■■■□ 3.14
SYNE2-218ENST00000555241 ZMYM4Q5VZL5 1548 aa34.67■■■■□ 3.14
SYNE2-218ENST00000555241 ARHGEF40Q8TER5 1519 aa34.65■■■■□ 3.14
SYNE2-218ENST00000555241 EFCAB2Q5VUJ9 269 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms