RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
PSMA6-208ENST00000554843 IQGAP2Q13576 1575 aa24.25■■□□□ 1.47
PSMA6-208ENST00000554843 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
PSMA6-208ENST00000554843 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
PSMA6-208ENST00000554843 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
PSMA6-208ENST00000554843 UGGT2Q9NYU1 1516 aa24.15■■□□□ 1.46
PSMA6-208ENST00000554843 EHMT2Q96KQ7 1210 aa24.14■■□□□ 1.45
PSMA6-208ENST00000554843 JPH4Q96JJ6 628 aa24.08■■□□□ 1.45
PSMA6-208ENST00000554843 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
PSMA6-208ENST00000554843 SAMD9Q5K651 1589 aa24.05■■□□□ 1.44
PSMA6-208ENST00000554843 EFCAB5A4FU69 1503 aa24.05■■□□□ 1.44
PSMA6-208ENST00000554843 KIAA0556O60303 1618 aa24.03■■□□□ 1.44
PSMA6-208ENST00000554843 PRG4Q92954 1404 aaPredicted RBP24.03■■□□□ 1.44
PSMA6-208ENST00000554843 DISP1Q96F81 1524 aa24.03■■□□□ 1.44
PSMA6-208ENST00000554843 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
PSMA6-208ENST00000554843 ARHGEF11O15085 1522 aa24■■□□□ 1.43
PSMA6-208ENST00000554843 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
PSMA6-208ENST00000554843 CEP162Q5TB80 1403 aa23.97■■□□□ 1.43
PSMA6-208ENST00000554843 ARHGAP35Q9NRY4 1499 aa23.95■■□□□ 1.42
PSMA6-208ENST00000554843 CLIP1P30622 1438 aa23.95■■□□□ 1.42
PSMA6-208ENST00000554843 RIMBP3CA6NJZ7 1639 aa23.93■■□□□ 1.42
PSMA6-208ENST00000554843 RIMBP3BA6NNM3 1639 aa23.93■■□□□ 1.42
PSMA6-208ENST00000554843 RIMBP3Q9UFD9 1639 aa23.93■■□□□ 1.42
PSMA6-208ENST00000554843 DNAJC5Q9H3Z4 198 aa23.88■■□□□ 1.41
PSMA6-208ENST00000554843 FHOD3Q2V2M9 1422 aa23.86■■□□□ 1.41
PSMA6-208ENST00000554843 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
PSMA6-208ENST00000554843 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
PSMA6-208ENST00000554843 PTPRGP23470 1445 aa23.8■■□□□ 1.4
PSMA6-208ENST00000554843 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
PSMA6-208ENST00000554843 FMN1Q68DA7 1419 aa23.77■■□□□ 1.4
PSMA6-208ENST00000554843 ABCA8O94911 1581 aa23.74■■□□□ 1.39
PSMA6-208ENST00000554843 UHRF1BP1LA0JNW5 1464 aa23.69■■□□□ 1.38
PSMA6-208ENST00000554843 UACAQ9BZF9 1416 aa23.69■■□□□ 1.38
PSMA6-208ENST00000554843 RAPGEF6Q8TEU7 1601 aa23.69■■□□□ 1.38
PSMA6-208ENST00000554843 ABCC2Q92887 1545 aa23.69■■□□□ 1.38
PSMA6-208ENST00000554843 PLB1Q6P1J6 1458 aa23.68■■□□□ 1.38
PSMA6-208ENST00000554843 VPS8Q8N3P4 1428 aa23.67■■□□□ 1.38
PSMA6-208ENST00000554843 PCF11O94913 1555 aaKnown RBP23.66■■□□□ 1.38
PSMA6-208ENST00000554843 ADCY10Q96PN6 1610 aa23.65■■□□□ 1.38
PSMA6-208ENST00000554843 CASKIN1Q8WXD9 1431 aa23.65■■□□□ 1.38
PSMA6-208ENST00000554843 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.38
PSMA6-208ENST00000554843 FYCO1Q9BQS8 1478 aa23.63■■□□□ 1.37
PSMA6-208ENST00000554843 HECW1Q76N89 1606 aa23.63■■□□□ 1.37
PSMA6-208ENST00000554843 CYB5RLQ6IPT4 315 aa23.61■■□□□ 1.37
PSMA6-208ENST00000554843 NUP153P49790 1475 aaKnown RBP23.6■■□□□ 1.37
PSMA6-208ENST00000554843 KDM5BQ9UGL1 1544 aa23.56■■□□□ 1.36
PSMA6-208ENST00000554843 CCDC18Q5T9S5 1454 aa23.53■■□□□ 1.36
PSMA6-208ENST00000554843 EPRSP07814 1512 aaKnown RBP23.51■■□□□ 1.35
PSMA6-208ENST00000554843 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
PSMA6-208ENST00000554843 LRRIQ1Q96JM4 1722 aa23.5■■□□□ 1.35
PSMA6-208ENST00000554843 ATP10BO94823 1461 aa23.49■■□□□ 1.35
PSMA6-208ENST00000554843 CDK13Q14004 1512 aaKnown RBP23.46■■□□□ 1.35
PSMA6-208ENST00000554843 CFAP43Q8NDM7 1665 aa23.46■■□□□ 1.35
PSMA6-208ENST00000554843 MAPKBP1O60336 1514 aa23.44■■□□□ 1.34
PSMA6-208ENST00000554843 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
PSMA6-208ENST00000554843 TIAM1Q13009 1591 aa23.42■■□□□ 1.34
PSMA6-208ENST00000554843 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
PSMA6-208ENST00000554843 NPM1P06748 294 aaKnown RBP eCLIP23.4■■□□□ 1.34
PSMA6-208ENST00000554843 ARID3CA6NKF2 412 aa23.37■■□□□ 1.33
PSMA6-208ENST00000554843 ASXL2Q76L83 1435 aa23.35■■□□□ 1.33
PSMA6-208ENST00000554843 WDR7Q9Y4E6 1490 aa23.35■■□□□ 1.33
PSMA6-208ENST00000554843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
PSMA6-208ENST00000554843 HNRNPUL2Q1KMD3 747 aaKnown RBP23.32■■□□□ 1.32
PSMA6-208ENST00000554843 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
PSMA6-208ENST00000554843 EHBP1L1Q8N3D4 1523 aa23.32■■□□□ 1.32
PSMA6-208ENST00000554843 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
PSMA6-208ENST00000554843 TROQ12816 1431 aaPredicted RBP23.31■■□□□ 1.32
PSMA6-208ENST00000554843 APLP2Q06481 763 aa23.29■■□□□ 1.32
PSMA6-208ENST00000554843 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
PSMA6-208ENST00000554843 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
PSMA6-208ENST00000554843 KIF14Q15058 1648 aa23.25■■□□□ 1.31
PSMA6-208ENST00000554843 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
PSMA6-208ENST00000554843 DIP2BQ9P265 1576 aa23.24■■□□□ 1.31
PSMA6-208ENST00000554843 ABCC10Q5T3U5 1492 aa23.23■■□□□ 1.31
PSMA6-208ENST00000554843 GLI2P10070 1586 aa23.21■■□□□ 1.31
PSMA6-208ENST00000554843 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
PSMA6-208ENST00000554843 ABCA9Q8IUA7 1624 aa23.18■■□□□ 1.3
PSMA6-208ENST00000554843 KANK4Q5T7N3 995 aaPredicted RBP23.17■■□□□ 1.3
PSMA6-208ENST00000554843 KIF13AQ9H1H9 1805 aa23.15■■□□□ 1.3
PSMA6-208ENST00000554843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.15■■□□□ 1.39e-11■■■■■ 40.7
PSMA6-208ENST00000554843 TTC37Q6PGP7 1564 aa23.14■■□□□ 1.3
PSMA6-208ENST00000554843 NCOA2Q15596 1464 aa23.13■■□□□ 1.29
PSMA6-208ENST00000554843 MAP3K4Q9Y6R4 1608 aa23.11■■□□□ 1.29
PSMA6-208ENST00000554843 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
PSMA6-208ENST00000554843 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
PSMA6-208ENST00000554843 ARAP3Q8WWN8 1544 aa23.07■■□□□ 1.28
PSMA6-208ENST00000554843 PREX2Q70Z35 1606 aa23.06■■□□□ 1.28
PSMA6-208ENST00000554843 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
PSMA6-208ENST00000554843 FAM69CQ0P6D2 419 aa23.05■■□□□ 1.28
PSMA6-208ENST00000554843 CDC42BPAQ5VT25 1732 aa23.05■■□□□ 1.28
PSMA6-208ENST00000554843 CD109Q6YHK3 1445 aa23.03■■□□□ 1.28
PSMA6-208ENST00000554843 GPATCH8Q9UKJ3 1502 aaKnown RBP23.03■■□□□ 1.28
PSMA6-208ENST00000554843 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
PSMA6-208ENST00000554843 PLCH2O75038 1416 aa23.01■■□□□ 1.27
PSMA6-208ENST00000554843 AEBP2Q6ZN18 517 aaPredicted RBP23.01■■□□□ 1.27
PSMA6-208ENST00000554843 PPRC1Q5VV67 1664 aaKnown RBP23■■□□□ 1.27
PSMA6-208ENST00000554843 MYOM3Q5VTT5 1437 aa22.99■■□□□ 1.27
PSMA6-208ENST00000554843 PHLDB1Q86UU1 1377 aa22.99■■□□□ 1.27
PSMA6-208ENST00000554843 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
PSMA6-208ENST00000554843 CFAP74Q9C0B2 1584 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms