RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 CUX2O14529 1486 aa5.33□□□□□ -1.56
KTN1-217ENST00000554831 RAB3GAP2Q9H2M9 1393 aa5.33□□□□□ -1.56
KTN1-217ENST00000554831 MRS2Q9HD23 443 aa5.33□□□□□ -1.56
KTN1-217ENST00000554831 RTL5Q5HYW3 569 aaPredicted RBP5.33□□□□□ -1.56
KTN1-217ENST00000554831 FAM9BQ8IZU0 186 aa5.32□□□□□ -1.56
KTN1-217ENST00000554831 DAXXQ9UER7 740 aaPredicted RBP5.32□□□□□ -1.56
KTN1-217ENST00000554831 ARID3CA6NKF2 412 aa5.32□□□□□ -1.56
KTN1-217ENST00000554831 RRP7BPQ9NSQ0 103 aa5.32□□□□□ -1.56
KTN1-217ENST00000554831 ANP32EQ9BTT0 268 aa5.3□□□□□ -1.56
KTN1-217ENST00000554831 MYT1LQ9UL68 1186 aa5.3□□□□□ -1.56
KTN1-217ENST00000554831 SLC4A1APQ9BWU0 796 aaKnown RBP5.3□□□□□ -1.56
KTN1-217ENST00000554831 TMC1Q8TDI8 760 aa5.3□□□□□ -1.56
KTN1-217ENST00000554831 TSPY4P0CV99 314 aa5.29□□□□□ -1.56
KTN1-217ENST00000554831 TSPY10P0CW01 314 aa5.29□□□□□ -1.56
KTN1-217ENST00000554831 ZNF777Q9ULD5 760 aaPredicted RBP5.29□□□□□ -1.56
KTN1-217ENST00000554831 CADPSQ9ULU8 1353 aa5.29□□□□□ -1.56
KTN1-217ENST00000554831 FBLN2P98095 1184 aa5.29□□□□□ -1.56
KTN1-217ENST00000554831 ANP32AP39687 249 aaKnown RBP5.28□□□□□ -1.56
KTN1-217ENST00000554831 CCDC136Q96JN2 1154 aa5.28□□□□□ -1.56
KTN1-217ENST00000554831 ERICH6BQ5W0A0 696 aa5.28□□□□□ -1.56
KTN1-217ENST00000554831 IGF1RP08069 1367 aa5.28□□□□□ -1.56
KTN1-217ENST00000554831 TSHZ2Q9NRE2 1034 aa5.28□□□□□ -1.56
KTN1-217ENST00000554831 FMN1Q68DA7 1419 aa5.28□□□□□ -1.56
KTN1-217ENST00000554831 PRXQ9BXM0 1461 aa5.27□□□□□ -1.57
KTN1-217ENST00000554831 KIF21BO75037 1637 aa5.27□□□□□ -1.57
KTN1-217ENST00000554831 PPP4R2Q9NY27 417 aa5.27□□□□□ -1.57
KTN1-217ENST00000554831 IRX6P78412 446 aaPredicted RBP5.26□□□□□ -1.57
KTN1-217ENST00000554831 NCAPD3P42695 1498 aa5.26□□□□□ -1.57
KTN1-217ENST00000554831 ARHGAP35Q9NRY4 1499 aa5.26□□□□□ -1.57
KTN1-217ENST00000554831 RBM19Q9Y4C8 960 aaKnown RBP5.26□□□□□ -1.57
KTN1-217ENST00000554831 CFDP1Q9UEE9 299 aaPredicted RBP5.25□□□□□ -1.57
KTN1-217ENST00000554831 RRBP1Q9P2E9 1410 aaKnown RBP5.25□□□□□ -1.57
KTN1-217ENST00000554831 KCNH8Q96L42 1107 aa5.25□□□□□ -1.57
KTN1-217ENST00000554831 ARAP1Q96P48 1450 aa5.24□□□□□ -1.57
KTN1-217ENST00000554831 ERICH3Q5RHP9 1530 aa5.24□□□□□ -1.57
KTN1-217ENST00000554831 PLEKHD1A6NEE1 506 aa5.24□□□□□ -1.57
KTN1-217ENST00000554831 HSPA5P11021 654 aaKnown RBP5.23□□□□□ -1.57
KTN1-217ENST00000554831 SYNJ1O43426 1573 aa5.23□□□□□ -1.57
KTN1-217ENST00000554831 ZBTB47Q9UFB7 747 aaPredicted RBP5.23□□□□□ -1.57
KTN1-217ENST00000554831 TDRD9Q8NDG6 1382 aaKnown RBP5.23□□□□□ -1.57
KTN1-217ENST00000554831 CHMP7Q8WUX9 453 aaPredicted RBP5.22□□□□□ -1.57
KTN1-217ENST00000554831 L3MBTL2Q969R5 705 aa5.22□□□□□ -1.57
KTN1-217ENST00000554831 MPHOSPH9Q99550 1183 aa5.22□□□□□ -1.57
KTN1-217ENST00000554831 KDM2AQ9Y2K7 1162 aa5.22□□□□□ -1.57
KTN1-217ENST00000554831 FHOD3Q2V2M9 1422 aa5.22□□□□□ -1.57
KTN1-217ENST00000554831 PHLDB1Q86UU1 1377 aa5.22□□□□□ -1.57
KTN1-217ENST00000554831 SALL2Q9Y467 1007 aaPredicted RBP5.21□□□□□ -1.58
KTN1-217ENST00000554831 CFTRP13569 1480 aa5.21□□□□□ -1.58
KTN1-217ENST00000554831 CARD11Q9BXL7 1154 aa5.21□□□□□ -1.58
KTN1-217ENST00000554831 B4GALNT3Q6L9W6 998 aa5.2□□□□□ -1.58
KTN1-217ENST00000554831 PRKRIP1Q9H875 184 aaPredicted RBP5.2□□□□□ -1.58
KTN1-217ENST00000554831 LRRC9Q6ZRR7 1453 aa5.2□□□□□ -1.58
KTN1-217ENST00000554831 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.19□□□□□ -1.58
KTN1-217ENST00000554831 PDS5BQ9NTI5 1447 aa5.19□□□□□ -1.58
KTN1-217ENST00000554831 TOP2BQ02880 1626 aa5.19□□□□□ -1.58
KTN1-217ENST00000554831 UACAQ9BZF9 1416 aa5.19□□□□□ -1.58
KTN1-217ENST00000554831 NPM2Q86SE8 214 aaKnown RBP5.19□□□□□ -1.58
KTN1-217ENST00000554831 FGD6Q6ZV73 1430 aa5.18□□□□□ -1.58
KTN1-217ENST00000554831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.18□□□□□ -1.58
KTN1-217ENST00000554831 PEG3Q9GZU2 1588 aa5.18□□□□□ -1.58
KTN1-217ENST00000554831 RGL3Q3MIN7 710 aa5.18□□□□□ -1.58
KTN1-217ENST00000554831 FGD5Q6ZNL6 1462 aa5.18□□□□□ -1.58
KTN1-217ENST00000554831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.18□□□□□ -1.584e-10■□□□□ 10.5
KTN1-217ENST00000554831 PKD2Q13563 968 aa5.17□□□□□ -1.58
KTN1-217ENST00000554831 FOXD1Q16676 465 aa5.17□□□□□ -1.58
KTN1-217ENST00000554831 CCDC18Q5T9S5 1454 aa5.17□□□□□ -1.58
KTN1-217ENST00000554831 FANCD2Q9BXW9 1451 aa5.17□□□□□ -1.58
KTN1-217ENST00000554831 NBR1Q14596 966 aa5.16□□□□□ -1.58
KTN1-217ENST00000554831 WDR43Q15061 677 aaKnown RBP eCLIP5.16□□□□□ -1.58
KTN1-217ENST00000554831 CDCA8Q53HL2 280 aa5.16□□□□□ -1.58
KTN1-217ENST00000554831 CASKIN1Q8WXD9 1431 aa5.16□□□□□ -1.58
KTN1-217ENST00000554831 EIF4G1Q04637 1599 aaKnown RBP5.16□□□□□ -1.58
KTN1-217ENST00000554831 ZBED9Q6R2W3 1325 aa5.16□□□□□ -1.58
KTN1-217ENST00000554831 DCAF11Q8TEB1 546 aa5.16□□□□□ -1.58
KTN1-217ENST00000554831 MYOM3Q5VTT5 1437 aa5.16□□□□□ -1.58
KTN1-217ENST00000554831 BICRAQ9NZM4 1560 aa5.15□□□□□ -1.58
KTN1-217ENST00000554831 CANXP27824 592 aaKnown RBP5.15□□□□□ -1.58
KTN1-217ENST00000554831 MAP3K1Q13233 1512 aa5.15□□□□□ -1.58
KTN1-217ENST00000554831 NUDCQ9Y266 331 aa5.15□□□□□ -1.59
KTN1-217ENST00000554831 NOP58Q9Y2X3 529 aaKnown RBP5.15□□□□□ -1.59
KTN1-217ENST00000554831 FANCIQ9NVI1 1328 aa5.15□□□□□ -1.59
KTN1-217ENST00000554831 HMGXB3Q12766 1538 aa5.15□□□□□ -1.59
KTN1-217ENST00000554831 CUX1P39880 1505 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 ROCK2O75116 1388 aaKnown RBP5.14□□□□□ -1.59
KTN1-217ENST00000554831 NLRP13Q86W25 1043 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 RALBP1Q15311 655 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 HFM1A2PYH4 1435 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 ANKRD30AQ9BXX3 1397 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 PPM1GO15355 546 aaPredicted RBP5.14□□□□□ -1.59
KTN1-217ENST00000554831 PDE3BQ13370 1112 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 KNSTRNQ9Y448 316 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 WASHC2AQ641Q2 1341 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 NUP155O75694 1391 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 SENP3-EIF4A1A0A087X0R7 540 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 RSPH4AQ5TD94 716 aa5.14□□□□□ -1.59
KTN1-217ENST00000554831 UPF2Q9HAU5 1272 aaKnown RBP5.13□□□□□ -1.59
KTN1-217ENST00000554831 FYCO1Q9BQS8 1478 aa5.13□□□□□ -1.59
KTN1-217ENST00000554831 TIAM1Q13009 1591 aa5.13□□□□□ -1.59
KTN1-217ENST00000554831 CCDC7Q96M83 1385 aa5.12□□□□□ -1.59
KTN1-217ENST00000554831 DDRGK1Q96HY6 314 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms