RNA–Protein interactions for RNA: ENST00000554465.5

SRSF5-207, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 3,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-207ENST00000554465 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.33e-8■■■■□ 24.7
SRSF5-207ENST00000554465 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
SRSF5-207ENST00000554465 RAD54L2Q9Y4B4 1467 aa13.15□□□□□ -0.3
SRSF5-207ENST00000554465 NUP160Q12769 1436 aa13.13□□□□□ -0.31
SRSF5-207ENST00000554465 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.31
SRSF5-207ENST00000554465 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.32
SRSF5-207ENST00000554465 GRIN2AQ12879 1464 aa13.08□□□□□ -0.32
SRSF5-207ENST00000554465 IQGAP2Q13576 1575 aa13.08□□□□□ -0.32
SRSF5-207ENST00000554465 CHD1O14646 1710 aa13.07□□□□□ -0.32
SRSF5-207ENST00000554465 KIAA0586Q9BVV6 1533 aa13.07□□□□□ -0.32
SRSF5-207ENST00000554465 CFAP43Q8NDM7 1665 aa13.06□□□□□ -0.32
SRSF5-207ENST00000554465 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
SRSF5-207ENST00000554465 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
SRSF5-207ENST00000554465 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
SRSF5-207ENST00000554465 CEP170Q5SW79 1584 aa13.02□□□□□ -0.32
SRSF5-207ENST00000554465 ZNF608Q9ULD9 1512 aaPredicted RBP13.02□□□□□ -0.33
SRSF5-207ENST00000554465 HRCP23327 699 aa13.01□□□□□ -0.33
SRSF5-207ENST00000554465 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
SRSF5-207ENST00000554465 CEP162Q5TB80 1403 aa12.97□□□□□ -0.33
SRSF5-207ENST00000554465 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.33
SRSF5-207ENST00000554465 FAM9AQ8IZU1 332 aaPredicted RBP12.96□□□□□ -0.34
SRSF5-207ENST00000554465 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
SRSF5-207ENST00000554465 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
SRSF5-207ENST00000554465 VPS8Q8N3P4 1428 aa12.93□□□□□ -0.34
SRSF5-207ENST00000554465 ADCY10Q96PN6 1610 aa12.93□□□□□ -0.34
SRSF5-207ENST00000554465 HECW1Q76N89 1606 aa12.91□□□□□ -0.34
SRSF5-207ENST00000554465 CCDC18Q5T9S5 1454 aa12.89□□□□□ -0.35
SRSF5-207ENST00000554465 CLIP1P30622 1438 aa12.89□□□□□ -0.35
SRSF5-207ENST00000554465 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
SRSF5-207ENST00000554465 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
SRSF5-207ENST00000554465 UHRF1BP1LA0JNW5 1464 aa12.89□□□□□ -0.35
SRSF5-207ENST00000554465 CASKIN1Q8WXD9 1431 aa12.89□□□□□ -0.35
SRSF5-207ENST00000554465 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
SRSF5-207ENST00000554465 ABCA8O94911 1581 aa12.87□□□□□ -0.35
SRSF5-207ENST00000554465 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
SRSF5-207ENST00000554465 RAPGEF6Q8TEU7 1601 aa12.84□□□□□ -0.35
SRSF5-207ENST00000554465 TIAM1Q13009 1591 aa12.84□□□□□ -0.35
SRSF5-207ENST00000554465 BCL11AQ9H165 835 aa12.84□□□□□ -0.35
SRSF5-207ENST00000554465 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
SRSF5-207ENST00000554465 PCF11O94913 1555 aaKnown RBP12.81□□□□□ -0.36
SRSF5-207ENST00000554465 CARMIL2Q6F5E8 1435 aa12.78□□□□□ -0.36
SRSF5-207ENST00000554465 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
SRSF5-207ENST00000554465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRSF5-207ENST00000554465 KDM5BQ9UGL1 1544 aa12.76□□□□□ -0.37
SRSF5-207ENST00000554465 ARAP3Q8WWN8 1544 aa12.75□□□□□ -0.37
SRSF5-207ENST00000554465 SUPT6HQ7KZ85 1726 aaKnown RBP12.73□□□□□ -0.37
SRSF5-207ENST00000554465 ITSN2Q9NZM3 1697 aa12.73□□□□□ -0.37
SRSF5-207ENST00000554465 ABCC2Q92887 1545 aa12.71□□□□□ -0.37
SRSF5-207ENST00000554465 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
SRSF5-207ENST00000554465 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
SRSF5-207ENST00000554465 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
SRSF5-207ENST00000554465 EPRSP07814 1512 aaKnown RBP12.65□□□□□ -0.38
SRSF5-207ENST00000554465 RRBP1Q9P2E9 1410 aaKnown RBP12.64□□□□□ -0.39
SRSF5-207ENST00000554465 NUP153P49790 1475 aaKnown RBP12.64□□□□□ -0.39
SRSF5-207ENST00000554465 GLI2P10070 1586 aa12.61□□□□□ -0.39
SRSF5-207ENST00000554465 ZCCHC11Q5TAX3 1644 aaKnown RBP12.61□□□□□ -0.39
SRSF5-207ENST00000554465 CROCC2H7BZ55 1655 aa12.61□□□□□ -0.39
SRSF5-207ENST00000554465 CFAP74Q9C0B2 1584 aa12.61□□□□□ -0.39
SRSF5-207ENST00000554465 MAPKBP1O60336 1514 aa12.61□□□□□ -0.39
SRSF5-207ENST00000554465 CHMP7Q8WUX9 453 aaPredicted RBP12.6□□□□□ -0.39
SRSF5-207ENST00000554465 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
SRSF5-207ENST00000554465 MIA2Q96PC5 1412 aa12.6□□□□□ -0.39
SRSF5-207ENST00000554465 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
SRSF5-207ENST00000554465 PREX2Q70Z35 1606 aa12.59□□□□□ -0.39
SRSF5-207ENST00000554465 PRG4Q92954 1404 aaPredicted RBP12.58□□□□□ -0.39
SRSF5-207ENST00000554465 KIF14Q15058 1648 aa12.58□□□□□ -0.4
SRSF5-207ENST00000554465 AKNAQ7Z591 1439 aa12.58□□□□□ -0.4
SRSF5-207ENST00000554465 UACAQ9BZF9 1416 aa12.58□□□□□ -0.4
SRSF5-207ENST00000554465 MAST1Q9Y2H9 1570 aa12.58□□□□□ -0.4
SRSF5-207ENST00000554465 ABCA9Q8IUA7 1624 aa12.58□□□□□ -0.4
SRSF5-207ENST00000554465 FHOD3Q2V2M9 1422 aa12.57□□□□□ -0.4
SRSF5-207ENST00000554465 ARHGEF5Q12774 1597 aa12.57□□□□□ -0.4
SRSF5-207ENST00000554465 ADGBQ8N7X0 1667 aa12.56□□□□□ -0.4
SRSF5-207ENST00000554465 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
SRSF5-207ENST00000554465 CDC42BPAQ5VT25 1732 aa12.55□□□□□ -0.4
SRSF5-207ENST00000554465 MYO5CQ9NQX4 1742 aa12.55□□□□□ -0.4
SRSF5-207ENST00000554465 ABCC10Q5T3U5 1492 aa12.54□□□□□ -0.4
SRSF5-207ENST00000554465 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
SRSF5-207ENST00000554465 JPH4Q96JJ6 628 aa12.54□□□□□ -0.4
SRSF5-207ENST00000554465 TROQ12816 1431 aaPredicted RBP12.53□□□□□ -0.4
SRSF5-207ENST00000554465 MAGI3Q5TCQ9 1506 aa12.53□□□□□ -0.4
SRSF5-207ENST00000554465 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
SRSF5-207ENST00000554465 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
SRSF5-207ENST00000554465 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.41
SRSF5-207ENST00000554465 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.41
SRSF5-207ENST00000554465 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.41
SRSF5-207ENST00000554465 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.41
SRSF5-207ENST00000554465 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
SRSF5-207ENST00000554465 DNMT1P26358 1616 aaKnown RBP12.5□□□□□ -0.41
SRSF5-207ENST00000554465 ERCC6L2Q5T890 1561 aa12.5□□□□□ -0.41
SRSF5-207ENST00000554465 ATP10BO94823 1461 aa12.5□□□□□ -0.41
SRSF5-207ENST00000554465 PTPRGP23470 1445 aa12.49□□□□□ -0.41
SRSF5-207ENST00000554465 CDC42BPBQ9Y5S2 1711 aa12.48□□□□□ -0.41
SRSF5-207ENST00000554465 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
SRSF5-207ENST00000554465 MAP3K4Q9Y6R4 1608 aa12.48□□□□□ -0.41
SRSF5-207ENST00000554465 PLEKHH2Q8IVE3 1493 aa12.47□□□□□ -0.41
SRSF5-207ENST00000554465 PLXNC1O60486 1568 aa12.46□□□□□ -0.41
SRSF5-207ENST00000554465 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.41
SRSF5-207ENST00000554465 ADGRL2O95490 1459 aa12.46□□□□□ -0.42
SRSF5-207ENST00000554465 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms