RNA–Protein interactions for RNA: ENST00000554327.5

ITGA7-208, Transcript of integrin subunit alpha 7, humanhuman

TSL 2

Gene ITGA7, Length 1,965 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-208ENST00000554327 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
ITGA7-208ENST00000554327 TRIM26Q12899 539 aaPredicted RBP25.86■■□□□ 1.73
ITGA7-208ENST00000554327 CHD1O14646 1710 aa25.85■■□□□ 1.73
ITGA7-208ENST00000554327 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
ITGA7-208ENST00000554327 FBLN2P98095 1184 aa25.83■■□□□ 1.73
ITGA7-208ENST00000554327 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
ITGA7-208ENST00000554327 ARHGAP35Q9NRY4 1499 aa25.8■■□□□ 1.72
ITGA7-208ENST00000554327 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
ITGA7-208ENST00000554327 IQGAP2Q13576 1575 aa25.77■■□□□ 1.72
ITGA7-208ENST00000554327 NUP160Q12769 1436 aa25.71■■□□□ 1.71
ITGA7-208ENST00000554327 KIAA0586Q9BVV6 1533 aa25.7■■□□□ 1.7
ITGA7-208ENST00000554327 SAMD9Q5K651 1589 aa25.69■■□□□ 1.7
ITGA7-208ENST00000554327 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
ITGA7-208ENST00000554327 VPS8Q8N3P4 1428 aa25.67■■□□□ 1.7
ITGA7-208ENST00000554327 P3H3Q8IVL6 736 aa25.65■■□□□ 1.7
ITGA7-208ENST00000554327 FHOD3Q2V2M9 1422 aa25.62■■□□□ 1.69
ITGA7-208ENST00000554327 PPARGC1BQ86YN6 1023 aaKnown RBP25.62■■□□□ 1.69
ITGA7-208ENST00000554327 UGGT2Q9NYU1 1516 aa25.62■■□□□ 1.69
ITGA7-208ENST00000554327 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
ITGA7-208ENST00000554327 DISP1Q96F81 1524 aa25.54■■□□□ 1.68
ITGA7-208ENST00000554327 KIAA0556O60303 1618 aa25.53■■□□□ 1.68
ITGA7-208ENST00000554327 PCF11O94913 1555 aaKnown RBP25.49■■□□□ 1.67
ITGA7-208ENST00000554327 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
ITGA7-208ENST00000554327 CLASP1Q7Z460 1538 aa25.46■■□□□ 1.67
ITGA7-208ENST00000554327 SHROOM2Q13796 1616 aa25.45■■□□□ 1.67
ITGA7-208ENST00000554327 HRCP23327 699 aa25.45■■□□□ 1.66
ITGA7-208ENST00000554327 FMN1Q68DA7 1419 aa25.42■■□□□ 1.66
ITGA7-208ENST00000554327 LRRIQ1Q96JM4 1722 aa25.38■■□□□ 1.65
ITGA7-208ENST00000554327 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
ITGA7-208ENST00000554327 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
ITGA7-208ENST00000554327 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
ITGA7-208ENST00000554327 CARMIL2Q6F5E8 1435 aa25.36■■□□□ 1.65
ITGA7-208ENST00000554327 CASKIN1Q8WXD9 1431 aa25.36■■□□□ 1.65
ITGA7-208ENST00000554327 ERCC6L2Q5T890 1561 aa25.34■■□□□ 1.65
ITGA7-208ENST00000554327 APLP2Q06481 763 aa25.33■■□□□ 1.64
ITGA7-208ENST00000554327 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
ITGA7-208ENST00000554327 CFAP43Q8NDM7 1665 aa25.31■■□□□ 1.64
ITGA7-208ENST00000554327 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
ITGA7-208ENST00000554327 HECW1Q76N89 1606 aa25.26■■□□□ 1.63
ITGA7-208ENST00000554327 RAPGEF6Q8TEU7 1601 aa25.26■■□□□ 1.63
ITGA7-208ENST00000554327 KANK4Q5T7N3 995 aaPredicted RBP25.25■■□□□ 1.63
ITGA7-208ENST00000554327 OSCARQ8IYS5 282 aa25.25■■□□□ 1.63
ITGA7-208ENST00000554327 MAP3K1Q13233 1512 aa25.24■■□□□ 1.63
ITGA7-208ENST00000554327 PLB1Q6P1J6 1458 aa25.22■■□□□ 1.63
ITGA7-208ENST00000554327 NUP153P49790 1475 aaKnown RBP25.16■■□□□ 1.62
ITGA7-208ENST00000554327 ABCA8O94911 1581 aa25.16■■□□□ 1.62
ITGA7-208ENST00000554327 EPRSP07814 1512 aaKnown RBP25.16■■□□□ 1.62
ITGA7-208ENST00000554327 LRRC9Q6ZRR7 1453 aa25.16■■□□□ 1.62
ITGA7-208ENST00000554327 CDK13Q14004 1512 aaKnown RBP25.15■■□□□ 1.62
ITGA7-208ENST00000554327 PTPRGP23470 1445 aa25.15■■□□□ 1.62
ITGA7-208ENST00000554327 ARID3CA6NKF2 412 aa25.14■■□□□ 1.61
ITGA7-208ENST00000554327 CCDC18Q5T9S5 1454 aa25.12■■□□□ 1.61
ITGA7-208ENST00000554327 MAGI3Q5TCQ9 1506 aa25.08■■□□□ 1.61
ITGA7-208ENST00000554327 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
ITGA7-208ENST00000554327 MTUS2Q5JR59 1369 aa25■■□□□ 1.59
ITGA7-208ENST00000554327 EHBP1L1Q8N3D4 1523 aa25■■□□□ 1.59
ITGA7-208ENST00000554327 ABCC2Q92887 1545 aa24.98■■□□□ 1.59
ITGA7-208ENST00000554327 ATP10BO94823 1461 aa24.97■■□□□ 1.59
ITGA7-208ENST00000554327 SUPT6HQ7KZ85 1726 aaKnown RBP24.97■■□□□ 1.59
ITGA7-208ENST00000554327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.96■■□□□ 1.59
ITGA7-208ENST00000554327 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
ITGA7-208ENST00000554327 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
ITGA7-208ENST00000554327 PHLDB1Q86UU1 1377 aa24.93■■□□□ 1.58
ITGA7-208ENST00000554327 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
ITGA7-208ENST00000554327 ADCY10Q96PN6 1610 aa24.92■■□□□ 1.58
ITGA7-208ENST00000554327 NCOA2Q15596 1464 aa24.9■■□□□ 1.58
ITGA7-208ENST00000554327 UHRF1BP1LA0JNW5 1464 aa24.89■■□□□ 1.58
ITGA7-208ENST00000554327 ZCCHC11Q5TAX3 1644 aaKnown RBP24.89■■□□□ 1.57
ITGA7-208ENST00000554327 RIMBP3CA6NJZ7 1639 aa24.86■■□□□ 1.57
ITGA7-208ENST00000554327 RIMBP3BA6NNM3 1639 aa24.86■■□□□ 1.57
ITGA7-208ENST00000554327 RIMBP3Q9UFD9 1639 aa24.86■■□□□ 1.57
ITGA7-208ENST00000554327 RRBP1Q9P2E9 1410 aaKnown RBP24.85■■□□□ 1.57
ITGA7-208ENST00000554327 KIF14Q15058 1648 aa24.85■■□□□ 1.57
ITGA7-208ENST00000554327 TROQ12816 1431 aaPredicted RBP24.84■■□□□ 1.57
ITGA7-208ENST00000554327 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
ITGA7-208ENST00000554327 KDM5BQ9UGL1 1544 aa24.82■■□□□ 1.56
ITGA7-208ENST00000554327 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
ITGA7-208ENST00000554327 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
ITGA7-208ENST00000554327 PLEKHD1A6NEE1 506 aa24.78■■□□□ 1.56
ITGA7-208ENST00000554327 MYOM3Q5VTT5 1437 aa24.76■■□□□ 1.55
ITGA7-208ENST00000554327 FGD6Q6ZV73 1430 aa24.75■■□□□ 1.55
ITGA7-208ENST00000554327 CDC42BPAQ5VT25 1732 aa24.7■■□□□ 1.54
ITGA7-208ENST00000554327 PTPN23Q9H3S7 1636 aa24.69■■□□□ 1.54
ITGA7-208ENST00000554327 ABCC10Q5T3U5 1492 aa24.68■■□□□ 1.54
ITGA7-208ENST00000554327 ITSN2Q9NZM3 1697 aa24.68■■□□□ 1.54
ITGA7-208ENST00000554327 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
ITGA7-208ENST00000554327 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
ITGA7-208ENST00000554327 TTC37Q6PGP7 1564 aa24.65■■□□□ 1.54
ITGA7-208ENST00000554327 GPATCH8Q9UKJ3 1502 aaKnown RBP24.63■■□□□ 1.53
ITGA7-208ENST00000554327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.63■■□□□ 1.53
ITGA7-208ENST00000554327 ITGAEP38570 1179 aa24.62■■□□□ 1.53
ITGA7-208ENST00000554327 MIA2Q96PC5 1412 aa24.61■■□□□ 1.53
ITGA7-208ENST00000554327 TCOF1Q13428 1488 aaKnown RBP24.6■■□□□ 1.53
ITGA7-208ENST00000554327 WDR7Q9Y4E6 1490 aa24.6■■□□□ 1.53
ITGA7-208ENST00000554327 CDC42BPBQ9Y5S2 1711 aa24.6■■□□□ 1.53
ITGA7-208ENST00000554327 KCNH8Q96L42 1107 aa24.6■■□□□ 1.53
ITGA7-208ENST00000554327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.59■■□□□ 1.53
ITGA7-208ENST00000554327 ASXL2Q76L83 1435 aa24.58■■□□□ 1.53
ITGA7-208ENST00000554327 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
ITGA7-208ENST00000554327 MYO5CQ9NQX4 1742 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms