RNA–Protein interactions for RNA: ENST00000554014.6

NUMB-208, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-208ENST00000554014 CEP170Q5SW79 1584 aa15.46■□□□□ 0.06
NUMB-208ENST00000554014 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
NUMB-208ENST00000554014 RAPGEF2Q9Y4G8 1499 aa15.44■□□□□ 0.06
NUMB-208ENST00000554014 CTTNBP2Q8WZ74 1663 aa15.42■□□□□ 0.06
NUMB-208ENST00000554014 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
NUMB-208ENST00000554014 FBLN2P98095 1184 aa15.41■□□□□ 0.06
NUMB-208ENST00000554014 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
NUMB-208ENST00000554014 NUP160Q12769 1436 aa15.41■□□□□ 0.06
NUMB-208ENST00000554014 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
NUMB-208ENST00000554014 SHROOM2Q13796 1616 aa15.33■□□□□ 0.04
NUMB-208ENST00000554014 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
NUMB-208ENST00000554014 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
NUMB-208ENST00000554014 KIAA0586Q9BVV6 1533 aa15.3■□□□□ 0.04
NUMB-208ENST00000554014 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
NUMB-208ENST00000554014 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
NUMB-208ENST00000554014 ERCC6L2Q5T890 1561 aa15.25■□□□□ 0.03
NUMB-208ENST00000554014 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
NUMB-208ENST00000554014 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
NUMB-208ENST00000554014 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
NUMB-208ENST00000554014 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
NUMB-208ENST00000554014 SAMD9Q5K651 1589 aa15.2■□□□□ 0.02
NUMB-208ENST00000554014 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
NUMB-208ENST00000554014 KIAA0556O60303 1618 aa15.19■□□□□ 0.02
NUMB-208ENST00000554014 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
NUMB-208ENST00000554014 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
NUMB-208ENST00000554014 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
NUMB-208ENST00000554014 PRG4Q92954 1404 aaPredicted RBP15.16■□□□□ 0.02
NUMB-208ENST00000554014 TNIKQ9UKE5 1360 aa15.16■□□□□ 0.02
NUMB-208ENST00000554014 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
NUMB-208ENST00000554014 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
NUMB-208ENST00000554014 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
NUMB-208ENST00000554014 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
NUMB-208ENST00000554014 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
NUMB-208ENST00000554014 ARHGAP35Q9NRY4 1499 aa15.1■□□□□ 0.01
NUMB-208ENST00000554014 CEP162Q5TB80 1403 aa15.08■□□□□ 0
NUMB-208ENST00000554014 CARMIL2Q6F5E8 1435 aa15.08■□□□□ 0
NUMB-208ENST00000554014 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
NUMB-208ENST00000554014 CLIP1P30622 1438 aa15.05■□□□□ 0
NUMB-208ENST00000554014 FHOD3Q2V2M9 1422 aa15.05■□□□□ 0
NUMB-208ENST00000554014 MAPK8IP2Q13387 824 aaPredicted RBP15.03■□□□□ -0
NUMB-208ENST00000554014 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
NUMB-208ENST00000554014 ADCY10Q96PN6 1610 aa15□□□□□ -0.01
NUMB-208ENST00000554014 ABCA8O94911 1581 aa14.99□□□□□ -0.01
NUMB-208ENST00000554014 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
NUMB-208ENST00000554014 PTPRGP23470 1445 aa14.98□□□□□ -0.01
NUMB-208ENST00000554014 PLB1Q6P1J6 1458 aa14.97□□□□□ -0.01
NUMB-208ENST00000554014 RAPGEF6Q8TEU7 1601 aa14.97□□□□□ -0.01
NUMB-208ENST00000554014 PCF11O94913 1555 aaKnown RBP14.96□□□□□ -0.01
NUMB-208ENST00000554014 LRRIQ1Q96JM4 1722 aa14.96□□□□□ -0.01
NUMB-208ENST00000554014 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
NUMB-208ENST00000554014 ABCC2Q92887 1545 aa14.95□□□□□ -0.02
NUMB-208ENST00000554014 CYB5RLQ6IPT4 315 aa14.92□□□□□ -0.02
NUMB-208ENST00000554014 FMN1Q68DA7 1419 aa14.92□□□□□ -0.02
NUMB-208ENST00000554014 UACAQ9BZF9 1416 aa14.92□□□□□ -0.02
NUMB-208ENST00000554014 UHRF1BP1LA0JNW5 1464 aa14.92□□□□□ -0.02
NUMB-208ENST00000554014 NUP153P49790 1475 aaKnown RBP14.9□□□□□ -0.02
NUMB-208ENST00000554014 ZCCHC11Q5TAX3 1644 aaKnown RBP14.9□□□□□ -0.02
NUMB-208ENST00000554014 HECW1Q76N89 1606 aa14.9□□□□□ -0.02
NUMB-208ENST00000554014 FYCO1Q9BQS8 1478 aa14.87□□□□□ -0.03
NUMB-208ENST00000554014 VPS8Q8N3P4 1428 aa14.87□□□□□ -0.03
NUMB-208ENST00000554014 CASKIN1Q8WXD9 1431 aa14.87□□□□□ -0.03
NUMB-208ENST00000554014 KDM5BQ9UGL1 1544 aa14.86□□□□□ -0.03
NUMB-208ENST00000554014 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
NUMB-208ENST00000554014 CFAP43Q8NDM7 1665 aa14.83□□□□□ -0.04
NUMB-208ENST00000554014 EPRSP07814 1512 aaKnown RBP14.82□□□□□ -0.04
NUMB-208ENST00000554014 ATP10BO94823 1461 aa14.82□□□□□ -0.04
NUMB-208ENST00000554014 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
NUMB-208ENST00000554014 MAPKBP1O60336 1514 aa14.8□□□□□ -0.04
NUMB-208ENST00000554014 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
NUMB-208ENST00000554014 CCDC18Q5T9S5 1454 aa14.78□□□□□ -0.04
NUMB-208ENST00000554014 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
NUMB-208ENST00000554014 TIAM1Q13009 1591 aa14.76□□□□□ -0.05
NUMB-208ENST00000554014 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
NUMB-208ENST00000554014 KIF13AQ9H1H9 1805 aa14.74□□□□□ -0.05
NUMB-208ENST00000554014 ASXL2Q76L83 1435 aa14.74□□□□□ -0.05
NUMB-208ENST00000554014 ATP1B4Q9UN42 357 aaPredicted RBP14.73□□□□□ -0.05
NUMB-208ENST00000554014 WDR7Q9Y4E6 1490 aa14.72□□□□□ -0.05
NUMB-208ENST00000554014 DIP2BQ9P265 1576 aa14.72□□□□□ -0.05
NUMB-208ENST00000554014 MAP3K1Q13233 1512 aa14.71□□□□□ -0.05
NUMB-208ENST00000554014 KIF14Q15058 1648 aa14.71□□□□□ -0.06
NUMB-208ENST00000554014 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
NUMB-208ENST00000554014 EHBP1L1Q8N3D4 1523 aa14.68□□□□□ -0.06
NUMB-208ENST00000554014 TTC37Q6PGP7 1564 aa14.67□□□□□ -0.06
NUMB-208ENST00000554014 ABCC10Q5T3U5 1492 aa14.66□□□□□ -0.06
NUMB-208ENST00000554014 TROQ12816 1431 aaPredicted RBP14.66□□□□□ -0.06
NUMB-208ENST00000554014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
NUMB-208ENST00000554014 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
NUMB-208ENST00000554014 ABCA9Q8IUA7 1624 aa14.65□□□□□ -0.06
NUMB-208ENST00000554014 LRRC9Q6ZRR7 1453 aa14.65□□□□□ -0.06
NUMB-208ENST00000554014 MAP3K4Q9Y6R4 1608 aa14.65□□□□□ -0.06
NUMB-208ENST00000554014 GLI2P10070 1586 aa14.65□□□□□ -0.06
NUMB-208ENST00000554014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.63□□□□□ -0.07
NUMB-208ENST00000554014 SUPT6HQ7KZ85 1726 aaKnown RBP14.63□□□□□ -0.07
NUMB-208ENST00000554014 PPRC1Q5VV67 1664 aaKnown RBP14.63□□□□□ -0.07
NUMB-208ENST00000554014 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
NUMB-208ENST00000554014 MYO5CQ9NQX4 1742 aa14.61□□□□□ -0.07
NUMB-208ENST00000554014 TSPOAP1O95153 1857 aa14.61□□□□□ -0.07
NUMB-208ENST00000554014 MTUS2Q5JR59 1369 aa14.61□□□□□ -0.07
NUMB-208ENST00000554014 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
NUMB-208ENST00000554014 PLEKHD1A6NEE1 506 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms