RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 CUL7Q14999 1698 aa30.11■■■□□ 2.41
SEC23A-206ENST00000553970 IGF1RP08069 1367 aa30.06■■■□□ 2.4
SEC23A-206ENST00000553970 KIAA0586Q9BVV6 1533 aa30.06■■■□□ 2.4
SEC23A-206ENST00000553970 NPM1P06748 294 aaKnown RBP eCLIP30.04■■■□□ 2.4
SEC23A-206ENST00000553970 AEBP2Q6ZN18 517 aaPredicted RBP30.01■■■□□ 2.39
SEC23A-206ENST00000553970 KIF13AQ9H1H9 1805 aa29.95■■■□□ 2.39
SEC23A-206ENST00000553970 MAPKBP1O60336 1514 aa29.93■■■□□ 2.38
SEC23A-206ENST00000553970 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
SEC23A-206ENST00000553970 ABCC10Q5T3U5 1492 aa29.89■■■□□ 2.38
SEC23A-206ENST00000553970 ADCY10Q96PN6 1610 aa29.86■■■□□ 2.37
SEC23A-206ENST00000553970 FAM69CQ0P6D2 419 aa29.84■■■□□ 2.37
SEC23A-206ENST00000553970 CARMIL2Q6F5E8 1435 aa29.83■■■□□ 2.37
SEC23A-206ENST00000553970 PTPRGP23470 1445 aa29.79■■■□□ 2.36
SEC23A-206ENST00000553970 DIP2BQ9P265 1576 aa29.78■■■□□ 2.36
SEC23A-206ENST00000553970 IQGAP2Q13576 1575 aa29.75■■■□□ 2.35
SEC23A-206ENST00000553970 TNIKQ9UKE5 1360 aa29.75■■■□□ 2.35
SEC23A-206ENST00000553970 RAPGEF2Q9Y4G8 1499 aa29.65■■■□□ 2.34
SEC23A-206ENST00000553970 ABCC2Q92887 1545 aa29.65■■■□□ 2.34
SEC23A-206ENST00000553970 TTBK1Q5TCY1 1321 aaPredicted RBP29.6■■■□□ 2.33
SEC23A-206ENST00000553970 UHRF1BP1LA0JNW5 1464 aa29.6■■■□□ 2.33
SEC23A-206ENST00000553970 KDM6BO15054 1643 aa29.58■■■□□ 2.33
SEC23A-206ENST00000553970 PLB1Q6P1J6 1458 aa29.58■■■□□ 2.33
SEC23A-206ENST00000553970 UGGT2Q9NYU1 1516 aa29.55■■■□□ 2.32
SEC23A-206ENST00000553970 UACAQ9BZF9 1416 aa29.55■■■□□ 2.32
SEC23A-206ENST00000553970 DISP1Q96F81 1524 aa29.55■■■□□ 2.32
SEC23A-206ENST00000553970 TSPOAP1O95153 1857 aa29.53■■■□□ 2.32
SEC23A-206ENST00000553970 ASXL2Q76L83 1435 aa29.52■■■□□ 2.32
SEC23A-206ENST00000553970 GLI2P10070 1586 aa29.49■■■□□ 2.31
SEC23A-206ENST00000553970 KIAA0556O60303 1618 aa29.45■■■□□ 2.31
SEC23A-206ENST00000553970 KDM5BQ9UGL1 1544 aa29.44■■■□□ 2.3
SEC23A-206ENST00000553970 GOLGA3Q08378 1498 aa29.4■■■□□ 2.3
SEC23A-206ENST00000553970 CTTNBP2Q8WZ74 1663 aa29.4■■■□□ 2.3
SEC23A-206ENST00000553970 EPRSP07814 1512 aaKnown RBP29.34■■■□□ 2.29
SEC23A-206ENST00000553970 ZCCHC11Q5TAX3 1644 aaKnown RBP29.34■■■□□ 2.29
SEC23A-206ENST00000553970 TEX14Q8IWB6 1497 aa29.33■■■□□ 2.29
SEC23A-206ENST00000553970 PPRC1Q5VV67 1664 aaKnown RBP29.31■■■□□ 2.28
SEC23A-206ENST00000553970 FAM9AQ8IZU1 332 aaPredicted RBP29.29■■■□□ 2.28
SEC23A-206ENST00000553970 PRXQ9BXM0 1461 aa29.29■■■□□ 2.28
SEC23A-206ENST00000553970 MAP3K4Q9Y6R4 1608 aa29.28■■■□□ 2.28
SEC23A-206ENST00000553970 WDR7Q9Y4E6 1490 aa29.25■■■□□ 2.27
SEC23A-206ENST00000553970 KDM4FA0A1W2PPD8 638 aa29.21■■■□□ 2.27
SEC23A-206ENST00000553970 ABCA8O94911 1581 aa29.18■■■□□ 2.26
SEC23A-206ENST00000553970 CFAP43Q8NDM7 1665 aa29.11■■■□□ 2.25
SEC23A-206ENST00000553970 CD109Q6YHK3 1445 aa29.08■■■□□ 2.25
SEC23A-206ENST00000553970 COL17A1Q9UMD9 1497 aaPredicted RBP29.08■■■□□ 2.25
SEC23A-206ENST00000553970 MAGI3Q5TCQ9 1506 aa29.08■■■□□ 2.25
SEC23A-206ENST00000553970 CSRNP3Q8WYN3 585 aa29.04■■■□□ 2.24
SEC23A-206ENST00000553970 KCNH8Q96L42 1107 aa29.03■■■□□ 2.24
SEC23A-206ENST00000553970 ADGRL1O94910 1474 aa29.03■■■□□ 2.24
SEC23A-206ENST00000553970 EEA1Q15075 1411 aa29.03■■■□□ 2.24
SEC23A-206ENST00000553970 SAMD9Q5K651 1589 aa28.95■■■□□ 2.22
SEC23A-206ENST00000553970 P3H3Q8IVL6 736 aa28.92■■■□□ 2.22
SEC23A-206ENST00000553970 ATP10BO94823 1461 aa28.91■■■□□ 2.22
SEC23A-206ENST00000553970 PHLDB1Q86UU1 1377 aa28.89■■■□□ 2.22
SEC23A-206ENST00000553970 RAPGEF6Q8TEU7 1601 aa28.87■■■□□ 2.21
SEC23A-206ENST00000553970 ARAP3Q8WWN8 1544 aa28.85■■■□□ 2.21
SEC23A-206ENST00000553970 ABCA9Q8IUA7 1624 aa28.83■■■□□ 2.21
SEC23A-206ENST00000553970 ARID3CA6NKF2 412 aa28.83■■■□□ 2.21
SEC23A-206ENST00000553970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.8■■■□□ 2.2
SEC23A-206ENST00000553970 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
SEC23A-206ENST00000553970 NEO1Q92859 1461 aa28.75■■■□□ 2.19
SEC23A-206ENST00000553970 EFCAB5A4FU69 1503 aa28.74■■■□□ 2.19
SEC23A-206ENST00000553970 NUP153P49790 1475 aaKnown RBP28.73■■■□□ 2.19
SEC23A-206ENST00000553970 KIF21BO75037 1637 aa28.72■■■□□ 2.19
SEC23A-206ENST00000553970 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.19
SEC23A-206ENST00000553970 RANGAP1P46060 587 aaPredicted RBP28.68■■■□□ 2.18
SEC23A-206ENST00000553970 PLEKHD1A6NEE1 506 aa28.67■■■□□ 2.18
SEC23A-206ENST00000553970 HECW2Q9P2P5 1572 aa28.65■■■□□ 2.18
SEC23A-206ENST00000553970 CFAP74Q9C0B2 1584 aa28.59■■■□□ 2.17
SEC23A-206ENST00000553970 RAPGEF3O95398 923 aa28.58■■■□□ 2.17
SEC23A-206ENST00000553970 DENND4BO75064 1496 aaPredicted RBP28.52■■■□□ 2.16
SEC23A-206ENST00000553970 FANCAO15360 1455 aa28.51■■■□□ 2.15
SEC23A-206ENST00000553970 FRMPD1Q5SYB0 1578 aa28.5■■■□□ 2.15
SEC23A-206ENST00000553970 FMN1Q68DA7 1419 aa28.5■■■□□ 2.15
SEC23A-206ENST00000553970 UBTFP17480 764 aaKnown RBP28.49■■■□□ 2.15
SEC23A-206ENST00000553970 AKNAQ7Z591 1439 aa28.49■■■□□ 2.15
SEC23A-206ENST00000553970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.48■■■□□ 2.15
SEC23A-206ENST00000553970 ADAMTSL3P82987 1691 aa28.48■■■□□ 2.15
SEC23A-206ENST00000553970 ARID4BQ4LE39 1312 aaPredicted RBP28.46■■■□□ 2.15
SEC23A-206ENST00000553970 ARHGEF40Q8TER5 1519 aa28.46■■■□□ 2.15
SEC23A-206ENST00000553970 PTPRMP28827 1452 aa28.45■■■□□ 2.14
SEC23A-206ENST00000553970 BCORL1Q5H9F3 1711 aa28.43■■■□□ 2.14
SEC23A-206ENST00000553970 RICTORQ6R327 1708 aa28.43■■■□□ 2.14
SEC23A-206ENST00000553970 CDK11AQ9UQ88 783 aaPredicted RBP28.43■■■□□ 2.14
SEC23A-206ENST00000553970 HECW1Q76N89 1606 aa28.43■■■□□ 2.14
SEC23A-206ENST00000553970 TTC37Q6PGP7 1564 aa28.42■■■□□ 2.14
SEC23A-206ENST00000553970 ILDR1Q86SU0 546 aaPredicted RBP28.41■■■□□ 2.14
SEC23A-206ENST00000553970 CDK13Q14004 1512 aaKnown RBP28.4■■■□□ 2.14
SEC23A-206ENST00000553970 ZMYM4Q5VZL5 1548 aa28.39■■■□□ 2.14
SEC23A-206ENST00000553970 MAGI2Q86UL8 1455 aa28.39■■■□□ 2.13
SEC23A-206ENST00000553970 POGZQ7Z3K3 1410 aa28.38■■■□□ 2.13
SEC23A-206ENST00000553970 PLCH2O75038 1416 aa28.35■■■□□ 2.13
SEC23A-206ENST00000553970 ATP1B4Q9UN42 357 aaPredicted RBP28.35■■■□□ 2.13
SEC23A-206ENST00000553970 ARHGAP35Q9NRY4 1499 aa28.34■■■□□ 2.13
SEC23A-206ENST00000553970 MADDQ8WXG6 1647 aa28.34■■■□□ 2.13
SEC23A-206ENST00000553970 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
SEC23A-206ENST00000553970 ZFYVE16Q7Z3T8 1539 aa28.33■■■□□ 2.13
SEC23A-206ENST00000553970 EFCAB2Q5VUJ9 269 aa28.29■■■□□ 2.12
SEC23A-206ENST00000553970 EHMT2Q96KQ7 1210 aa28.29■■■□□ 2.12
SEC23A-206ENST00000553970 MYO5CQ9NQX4 1742 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms