RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 IGF1RP08069 1367 aa15.76■□□□□ 0.11
SDR39U1-207ENST00000553937 KIF13AQ9H1H9 1805 aa15.73■□□□□ 0.11
SDR39U1-207ENST00000553937 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
SDR39U1-207ENST00000553937 KIAA0586Q9BVV6 1533 aa15.72■□□□□ 0.11
SDR39U1-207ENST00000553937 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
SDR39U1-207ENST00000553937 ADCY10Q96PN6 1610 aa15.67■□□□□ 0.1
SDR39U1-207ENST00000553937 IQGAP2Q13576 1575 aa15.65■□□□□ 0.1
SDR39U1-207ENST00000553937 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
SDR39U1-207ENST00000553937 MAPKBP1O60336 1514 aa15.59■□□□□ 0.09
SDR39U1-207ENST00000553937 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.08
SDR39U1-207ENST00000553937 DIP2BQ9P265 1576 aa15.57■□□□□ 0.08
SDR39U1-207ENST00000553937 CARMIL2Q6F5E8 1435 aa15.54■□□□□ 0.08
SDR39U1-207ENST00000553937 DISP1Q96F81 1524 aa15.53■□□□□ 0.08
SDR39U1-207ENST00000553937 ABCC10Q5T3U5 1492 aa15.52■□□□□ 0.08
SDR39U1-207ENST00000553937 NPM1P06748 294 aaKnown RBP eCLIP15.52■□□□□ 0.08
SDR39U1-207ENST00000553937 TSPOAP1O95153 1857 aa15.52■□□□□ 0.07
SDR39U1-207ENST00000553937 UGGT2Q9NYU1 1516 aa15.52■□□□□ 0.07
SDR39U1-207ENST00000553937 PTPRGP23470 1445 aa15.51■□□□□ 0.07
SDR39U1-207ENST00000553937 KIAA0556O60303 1618 aa15.51■□□□□ 0.07
SDR39U1-207ENST00000553937 TNIKQ9UKE5 1360 aa15.5■□□□□ 0.07
SDR39U1-207ENST00000553937 TTBK1Q5TCY1 1321 aaPredicted RBP15.49■□□□□ 0.07
SDR39U1-207ENST00000553937 ABCC2Q92887 1545 aa15.47■□□□□ 0.07
SDR39U1-207ENST00000553937 FAM69CQ0P6D2 419 aa15.45■□□□□ 0.06
SDR39U1-207ENST00000553937 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
SDR39U1-207ENST00000553937 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
SDR39U1-207ENST00000553937 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
SDR39U1-207ENST00000553937 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
SDR39U1-207ENST00000553937 KDM6BO15054 1643 aa15.4■□□□□ 0.06
SDR39U1-207ENST00000553937 PPRC1Q5VV67 1664 aaKnown RBP15.4■□□□□ 0.06
SDR39U1-207ENST00000553937 ASXL2Q76L83 1435 aa15.39■□□□□ 0.05
SDR39U1-207ENST00000553937 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
SDR39U1-207ENST00000553937 GLI2P10070 1586 aa15.38■□□□□ 0.05
SDR39U1-207ENST00000553937 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
SDR39U1-207ENST00000553937 PLB1Q6P1J6 1458 aa15.37■□□□□ 0.05
SDR39U1-207ENST00000553937 MAP3K4Q9Y6R4 1608 aa15.35■□□□□ 0.05
SDR39U1-207ENST00000553937 ABCA8O94911 1581 aa15.34■□□□□ 0.05
SDR39U1-207ENST00000553937 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
SDR39U1-207ENST00000553937 SAMD9Q5K651 1589 aa15.31■□□□□ 0.04
SDR39U1-207ENST00000553937 EEA1Q15075 1411 aa15.29■□□□□ 0.04
SDR39U1-207ENST00000553937 AEBP2Q6ZN18 517 aaPredicted RBP15.29■□□□□ 0.04
SDR39U1-207ENST00000553937 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
SDR39U1-207ENST00000553937 WDR7Q9Y4E6 1490 aa15.27■□□□□ 0.04
SDR39U1-207ENST00000553937 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
SDR39U1-207ENST00000553937 KIF21BO75037 1637 aa15.25■□□□□ 0.03
SDR39U1-207ENST00000553937 RAPGEF6Q8TEU7 1601 aa15.23■□□□□ 0.03
SDR39U1-207ENST00000553937 TEX14Q8IWB6 1497 aa15.21■□□□□ 0.03
SDR39U1-207ENST00000553937 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
SDR39U1-207ENST00000553937 FAM9AQ8IZU1 332 aaPredicted RBP15.2■□□□□ 0.02
SDR39U1-207ENST00000553937 COL17A1Q9UMD9 1497 aaPredicted RBP15.17■□□□□ 0.02
SDR39U1-207ENST00000553937 ATP10BO94823 1461 aa15.16■□□□□ 0.02
SDR39U1-207ENST00000553937 MAGI3Q5TCQ9 1506 aa15.15■□□□□ 0.02
SDR39U1-207ENST00000553937 ABCA9Q8IUA7 1624 aa15.14■□□□□ 0.01
SDR39U1-207ENST00000553937 EFCAB5A4FU69 1503 aa15.14■□□□□ 0.01
SDR39U1-207ENST00000553937 ARID3CA6NKF2 412 aa15.14■□□□□ 0.01
SDR39U1-207ENST00000553937 KCNH8Q96L42 1107 aa15.14■□□□□ 0.01
SDR39U1-207ENST00000553937 FHOD3Q2V2M9 1422 aa15.14■□□□□ 0.01
SDR39U1-207ENST00000553937 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
SDR39U1-207ENST00000553937 RANGAP1P46060 587 aaPredicted RBP15.13■□□□□ 0.01
SDR39U1-207ENST00000553937 NUP153P49790 1475 aaKnown RBP15.12■□□□□ 0.01
SDR39U1-207ENST00000553937 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
SDR39U1-207ENST00000553937 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
SDR39U1-207ENST00000553937 ADGRL1O94910 1474 aa15.07■□□□□ 0
SDR39U1-207ENST00000553937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
SDR39U1-207ENST00000553937 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
SDR39U1-207ENST00000553937 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
SDR39U1-207ENST00000553937 ARAP3Q8WWN8 1544 aa15.03■□□□□ -0
SDR39U1-207ENST00000553937 LRRIQ1Q96JM4 1722 aa15.01□□□□□ -0.01
SDR39U1-207ENST00000553937 HECW1Q76N89 1606 aa15.01□□□□□ -0.01
SDR39U1-207ENST00000553937 CDK13Q14004 1512 aaKnown RBP15.01□□□□□ -0.01
SDR39U1-207ENST00000553937 TTC37Q6PGP7 1564 aa15□□□□□ -0.01
SDR39U1-207ENST00000553937 UBTFP17480 764 aaKnown RBP15□□□□□ -0.01
SDR39U1-207ENST00000553937 ARHGAP35Q9NRY4 1499 aa15□□□□□ -0.01
SDR39U1-207ENST00000553937 FRMPD1Q5SYB0 1578 aa14.98□□□□□ -0.01
SDR39U1-207ENST00000553937 CFAP74Q9C0B2 1584 aa14.98□□□□□ -0.01
SDR39U1-207ENST00000553937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.98□□□□□ -0.01
SDR39U1-207ENST00000553937 NEO1Q92859 1461 aa14.98□□□□□ -0.01
SDR39U1-207ENST00000553937 RICTORQ6R327 1708 aa14.97□□□□□ -0.01
SDR39U1-207ENST00000553937 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
SDR39U1-207ENST00000553937 PHLDB1Q86UU1 1377 aa14.95□□□□□ -0.02
SDR39U1-207ENST00000553937 MYO5CQ9NQX4 1742 aa14.95□□□□□ -0.02
SDR39U1-207ENST00000553937 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
SDR39U1-207ENST00000553937 FANCAO15360 1455 aa14.91□□□□□ -0.02
SDR39U1-207ENST00000553937 KIF14Q15058 1648 aa14.91□□□□□ -0.02
SDR39U1-207ENST00000553937 PCF11O94913 1555 aaKnown RBP14.9□□□□□ -0.02
SDR39U1-207ENST00000553937 RAPGEF3O95398 923 aa14.9□□□□□ -0.02
SDR39U1-207ENST00000553937 ARHGEF40Q8TER5 1519 aa14.89□□□□□ -0.03
SDR39U1-207ENST00000553937 ADAMTSL3P82987 1691 aa14.88□□□□□ -0.03
SDR39U1-207ENST00000553937 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
SDR39U1-207ENST00000553937 AKNAQ7Z591 1439 aa14.88□□□□□ -0.03
SDR39U1-207ENST00000553937 BCORL1Q5H9F3 1711 aa14.88□□□□□ -0.03
SDR39U1-207ENST00000553937 DENND4BO75064 1496 aaPredicted RBP14.87□□□□□ -0.03
SDR39U1-207ENST00000553937 HECW2Q9P2P5 1572 aa14.86□□□□□ -0.03
SDR39U1-207ENST00000553937 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
SDR39U1-207ENST00000553937 SIGLEC1Q9BZZ2 1709 aa14.84□□□□□ -0.03
SDR39U1-207ENST00000553937 CDC42BPBQ9Y5S2 1711 aa14.83□□□□□ -0.03
SDR39U1-207ENST00000553937 MADDQ8WXG6 1647 aa14.83□□□□□ -0.04
SDR39U1-207ENST00000553937 PLCH2O75038 1416 aa14.83□□□□□ -0.04
SDR39U1-207ENST00000553937 TROQ12816 1431 aaPredicted RBP14.82□□□□□ -0.04
SDR39U1-207ENST00000553937 CASKIN1Q8WXD9 1431 aa14.82□□□□□ -0.04
SDR39U1-207ENST00000553937 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms