RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
PSMC6-204ENST00000553798 RAPGEF2Q9Y4G8 1499 aa19.52■□□□□ 0.72
PSMC6-204ENST00000553798 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
PSMC6-204ENST00000553798 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
PSMC6-204ENST00000553798 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
PSMC6-204ENST00000553798 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
PSMC6-204ENST00000553798 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
PSMC6-204ENST00000553798 KIAA0586Q9BVV6 1533 aa19.49■□□□□ 0.71
PSMC6-204ENST00000553798 PIAS4Q8N2W9 510 aaPredicted RBP19.47■□□□□ 0.71
PSMC6-204ENST00000553798 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
PSMC6-204ENST00000553798 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
PSMC6-204ENST00000553798 JPH4Q96JJ6 628 aa19.44■□□□□ 0.7
PSMC6-204ENST00000553798 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
PSMC6-204ENST00000553798 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
PSMC6-204ENST00000553798 PRG4Q92954 1404 aaPredicted RBP19.37■□□□□ 0.69
PSMC6-204ENST00000553798 ERCC6L2Q5T890 1561 aa19.36■□□□□ 0.69
PSMC6-204ENST00000553798 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
PSMC6-204ENST00000553798 IQGAP2Q13576 1575 aa19.35■□□□□ 0.69
PSMC6-204ENST00000553798 KIF21BO75037 1637 aa19.31■□□□□ 0.68
PSMC6-204ENST00000553798 CTTNBP2Q8WZ74 1663 aa19.28■□□□□ 0.68
PSMC6-204ENST00000553798 UGGT2Q9NYU1 1516 aa19.28■□□□□ 0.68
PSMC6-204ENST00000553798 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
PSMC6-204ENST00000553798 CARMIL2Q6F5E8 1435 aa19.25■□□□□ 0.67
PSMC6-204ENST00000553798 DISP1Q96F81 1524 aa19.23■□□□□ 0.67
PSMC6-204ENST00000553798 ADRA2BP18089 450 aa19.19■□□□□ 0.66
PSMC6-204ENST00000553798 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
PSMC6-204ENST00000553798 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
PSMC6-204ENST00000553798 PTPRGP23470 1445 aa19.17■□□□□ 0.66
PSMC6-204ENST00000553798 KIAA0556O60303 1618 aa19.15■□□□□ 0.66
PSMC6-204ENST00000553798 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
PSMC6-204ENST00000553798 SAMD9Q5K651 1589 aa19.08■□□□□ 0.65
PSMC6-204ENST00000553798 EHMT2Q96KQ7 1210 aa19.07■□□□□ 0.64
PSMC6-204ENST00000553798 ADCY10Q96PN6 1610 aa19.05■□□□□ 0.64
PSMC6-204ENST00000553798 UHRF1BP1LA0JNW5 1464 aa19.04■□□□□ 0.64
PSMC6-204ENST00000553798 UACAQ9BZF9 1416 aa19.04■□□□□ 0.64
PSMC6-204ENST00000553798 TTBK1Q5TCY1 1321 aaPredicted RBP19.02■□□□□ 0.64
PSMC6-204ENST00000553798 EFCAB5A4FU69 1503 aa19.02■□□□□ 0.64
PSMC6-204ENST00000553798 P3H3Q8IVL6 736 aa19.01■□□□□ 0.63
PSMC6-204ENST00000553798 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
PSMC6-204ENST00000553798 ABCC2Q92887 1545 aa18.99■□□□□ 0.63
PSMC6-204ENST00000553798 NPM1P06748 294 aaKnown RBP eCLIP18.98■□□□□ 0.63
PSMC6-204ENST00000553798 ABCA8O94911 1581 aa18.97■□□□□ 0.63
PSMC6-204ENST00000553798 PLB1Q6P1J6 1458 aa18.97■□□□□ 0.63
PSMC6-204ENST00000553798 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
PSMC6-204ENST00000553798 FHOD3Q2V2M9 1422 aa18.94■□□□□ 0.62
PSMC6-204ENST00000553798 ARHGAP35Q9NRY4 1499 aa18.94■□□□□ 0.62
PSMC6-204ENST00000553798 MAPKBP1O60336 1514 aa18.94■□□□□ 0.62
PSMC6-204ENST00000553798 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
PSMC6-204ENST00000553798 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
PSMC6-204ENST00000553798 RAPGEF6Q8TEU7 1601 aa18.85■□□□□ 0.61
PSMC6-204ENST00000553798 CLIP1P30622 1438 aa18.85■□□□□ 0.61
PSMC6-204ENST00000553798 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
PSMC6-204ENST00000553798 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
PSMC6-204ENST00000553798 ASXL2Q76L83 1435 aa18.84■□□□□ 0.61
PSMC6-204ENST00000553798 ABCC10Q5T3U5 1492 aa18.84■□□□□ 0.61
PSMC6-204ENST00000553798 ATP10BO94823 1461 aa18.83■□□□□ 0.6
PSMC6-204ENST00000553798 NUP153P49790 1475 aaKnown RBP18.82■□□□□ 0.6
PSMC6-204ENST00000553798 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
PSMC6-204ENST00000553798 DIP2BQ9P265 1576 aa18.78■□□□□ 0.6
PSMC6-204ENST00000553798 KIF13AQ9H1H9 1805 aa18.78■□□□□ 0.6
PSMC6-204ENST00000553798 FAM69CQ0P6D2 419 aa18.77■□□□□ 0.6
PSMC6-204ENST00000553798 WDR7Q9Y4E6 1490 aa18.76■□□□□ 0.59
PSMC6-204ENST00000553798 GLI2P10070 1586 aa18.74■□□□□ 0.59
PSMC6-204ENST00000553798 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
PSMC6-204ENST00000553798 EPRSP07814 1512 aaKnown RBP18.73■□□□□ 0.59
PSMC6-204ENST00000553798 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
PSMC6-204ENST00000553798 HECW1Q76N89 1606 aa18.71■□□□□ 0.58
PSMC6-204ENST00000553798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
PSMC6-204ENST00000553798 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
PSMC6-204ENST00000553798 FYCO1Q9BQS8 1478 aa18.67■□□□□ 0.58
PSMC6-204ENST00000553798 PCF11O94913 1555 aaKnown RBP18.67■□□□□ 0.58
PSMC6-204ENST00000553798 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
PSMC6-204ENST00000553798 PLEKHD1A6NEE1 506 aa18.66■□□□□ 0.58
PSMC6-204ENST00000553798 ATP1B4Q9UN42 357 aaPredicted RBP18.66■□□□□ 0.58
PSMC6-204ENST00000553798 KCNH8Q96L42 1107 aa18.65■□□□□ 0.58
PSMC6-204ENST00000553798 MAP3K4Q9Y6R4 1608 aa18.63■□□□□ 0.57
PSMC6-204ENST00000553798 CDK11AQ9UQ88 783 aaPredicted RBP18.62■□□□□ 0.57
PSMC6-204ENST00000553798 CCDC18Q5T9S5 1454 aa18.62■□□□□ 0.57
PSMC6-204ENST00000553798 LRRIQ1Q96JM4 1722 aa18.62■□□□□ 0.57
PSMC6-204ENST00000553798 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.57
PSMC6-204ENST00000553798 ABCA9Q8IUA7 1624 aa18.58■□□□□ 0.56
PSMC6-204ENST00000553798 CD109Q6YHK3 1445 aa18.57■□□□□ 0.56
PSMC6-204ENST00000553798 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
PSMC6-204ENST00000553798 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
PSMC6-204ENST00000553798 TSPOAP1O95153 1857 aa18.56■□□□□ 0.56
PSMC6-204ENST00000553798 MAGI3Q5TCQ9 1506 aa18.56■□□□□ 0.56
PSMC6-204ENST00000553798 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
PSMC6-204ENST00000553798 TEX14Q8IWB6 1497 aa18.53■□□□□ 0.56
PSMC6-204ENST00000553798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.52■□□□□ 0.56
PSMC6-204ENST00000553798 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
PSMC6-204ENST00000553798 KIF14Q15058 1648 aa18.46■□□□□ 0.55
PSMC6-204ENST00000553798 PHLDB1Q86UU1 1377 aa18.46■□□□□ 0.55
PSMC6-204ENST00000553798 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
PSMC6-204ENST00000553798 PLCH2O75038 1416 aa18.44■□□□□ 0.54
PSMC6-204ENST00000553798 NEO1Q92859 1461 aa18.44■□□□□ 0.54
PSMC6-204ENST00000553798 KDM6BO15054 1643 aa18.43■□□□□ 0.54
PSMC6-204ENST00000553798 COL17A1Q9UMD9 1497 aaPredicted RBP18.43■□□□□ 0.54
PSMC6-204ENST00000553798 MTUS2Q5JR59 1369 aa18.42■□□□□ 0.54
PSMC6-204ENST00000553798 ARAP3Q8WWN8 1544 aa18.42■□□□□ 0.54
PSMC6-204ENST00000553798 TIAM1Q13009 1591 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms