RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 KIAA0586Q9BVV6 1533 aa34.54■■■■□ 3.12
FOXA1-203ENST00000553751 PRG4Q92954 1404 aaPredicted RBP34.48■■■■□ 3.11
FOXA1-203ENST00000553751 RAPGEF2Q9Y4G8 1499 aa34.48■■■■□ 3.11
FOXA1-203ENST00000553751 JPH4Q96JJ6 628 aa34.48■■■■□ 3.11
FOXA1-203ENST00000553751 PRXQ9BXM0 1461 aa34.36■■■■□ 3.09
FOXA1-203ENST00000553751 IQGAP2Q13576 1575 aa34.35■■■■□ 3.09
FOXA1-203ENST00000553751 CHIC1Q5VXU3 224 aa34.31■■■■□ 3.08
FOXA1-203ENST00000553751 EEA1Q15075 1411 aa34.27■■■■□ 3.08
FOXA1-203ENST00000553751 CSRNP3Q8WYN3 585 aa34.21■■■■□ 3.07
FOXA1-203ENST00000553751 CTTNBP2Q8WZ74 1663 aa34.19■■■■□ 3.06
FOXA1-203ENST00000553751 UGGT2Q9NYU1 1516 aa34.15■■■■□ 3.06
FOXA1-203ENST00000553751 CARMIL2Q6F5E8 1435 aa34.13■■■■□ 3.05
FOXA1-203ENST00000553751 DISP1Q96F81 1524 aa34.13■■■■□ 3.05
FOXA1-203ENST00000553751 TNIKQ9UKE5 1360 aa34.06■■■■□ 3.04
FOXA1-203ENST00000553751 FAM9AQ8IZU1 332 aaPredicted RBP34.05■■■■□ 3.04
FOXA1-203ENST00000553751 KIAA0556O60303 1618 aa34.04■■■■□ 3.04
FOXA1-203ENST00000553751 PTPRGP23470 1445 aa34.04■■■■□ 3.04
FOXA1-203ENST00000553751 ADCY10Q96PN6 1610 aa34.03■■■■□ 3.04
FOXA1-203ENST00000553751 TRHP20396 242 aaPredicted RBP34■■■■□ 3.03
FOXA1-203ENST00000553751 KIF21BO75037 1637 aa33.97■■■■□ 3.03
FOXA1-203ENST00000553751 GOLGA3Q08378 1498 aa33.92■■■■□ 3.02
FOXA1-203ENST00000553751 TTBK1Q5TCY1 1321 aaPredicted RBP33.91■■■■□ 3.02
FOXA1-203ENST00000553751 MAPKBP1O60336 1514 aa33.84■■■■□ 3.01
FOXA1-203ENST00000553751 UHRF1BP1LA0JNW5 1464 aa33.82■■■■□ 3.01
FOXA1-203ENST00000553751 UACAQ9BZF9 1416 aa33.82■■■■□ 3
FOXA1-203ENST00000553751 ABCC2Q92887 1545 aa33.8■■■■□ 3
FOXA1-203ENST00000553751 NPM1P06748 294 aaKnown RBP eCLIP33.8■■■■□ 3
FOXA1-203ENST00000553751 SAMD9Q5K651 1589 aa33.77■■■■□ 3
FOXA1-203ENST00000553751 KIF13AQ9H1H9 1805 aa33.71■■■□□ 2.99
FOXA1-203ENST00000553751 PLB1Q6P1J6 1458 aa33.69■■■□□ 2.98
FOXA1-203ENST00000553751 ABCC10Q5T3U5 1492 aa33.68■■■□□ 2.98
FOXA1-203ENST00000553751 KDM5BQ9UGL1 1544 aa33.67■■■□□ 2.98
FOXA1-203ENST00000553751 ABCA8O94911 1581 aa33.67■■■□□ 2.98
FOXA1-203ENST00000553751 DIP2BQ9P265 1576 aa33.64■■■□□ 2.98
FOXA1-203ENST00000553751 P3H3Q8IVL6 736 aa33.63■■■□□ 2.97
FOXA1-203ENST00000553751 EHMT2Q96KQ7 1210 aa33.62■■■□□ 2.97
FOXA1-203ENST00000553751 ZCCHC11Q5TAX3 1644 aaKnown RBP33.61■■■□□ 2.97
FOXA1-203ENST00000553751 RANGAP1P46060 587 aaPredicted RBP33.58■■■□□ 2.97
FOXA1-203ENST00000553751 ASXL2Q76L83 1435 aa33.58■■■□□ 2.97
FOXA1-203ENST00000553751 EFCAB5A4FU69 1503 aa33.58■■■□□ 2.97
FOXA1-203ENST00000553751 UBTFP17480 764 aaKnown RBP33.57■■■□□ 2.96
FOXA1-203ENST00000553751 FAM69CQ0P6D2 419 aa33.54■■■□□ 2.96
FOXA1-203ENST00000553751 FHOD3Q2V2M9 1422 aa33.53■■■□□ 2.96
FOXA1-203ENST00000553751 RAPGEF6Q8TEU7 1601 aa33.45■■■□□ 2.95
FOXA1-203ENST00000553751 GLI2P10070 1586 aa33.42■■■□□ 2.94
FOXA1-203ENST00000553751 WDR7Q9Y4E6 1490 aa33.4■■■□□ 2.94
FOXA1-203ENST00000553751 EPRSP07814 1512 aaKnown RBP33.39■■■□□ 2.94
FOXA1-203ENST00000553751 ARHGAP35Q9NRY4 1499 aa33.38■■■□□ 2.93
FOXA1-203ENST00000553751 ATP10BO94823 1461 aa33.35■■■□□ 2.93
FOXA1-203ENST00000553751 NUP153P49790 1475 aaKnown RBP33.34■■■□□ 2.93
FOXA1-203ENST00000553751 ARID3CA6NKF2 412 aa33.31■■■□□ 2.92
FOXA1-203ENST00000553751 TSPOAP1O95153 1857 aa33.31■■■□□ 2.92
FOXA1-203ENST00000553751 MAP3K4Q9Y6R4 1608 aa33.28■■■□□ 2.92
FOXA1-203ENST00000553751 PPRC1Q5VV67 1664 aaKnown RBP33.26■■■□□ 2.91
FOXA1-203ENST00000553751 FMN1Q68DA7 1419 aa33.23■■■□□ 2.91
FOXA1-203ENST00000553751 KCNH8Q96L42 1107 aa33.15■■■□□ 2.9
FOXA1-203ENST00000553751 CFAP43Q8NDM7 1665 aa33.14■■■□□ 2.9
FOXA1-203ENST00000553751 HECW1Q76N89 1606 aa33.13■■■□□ 2.89
FOXA1-203ENST00000553751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.12■■■□□ 2.89
FOXA1-203ENST00000553751 HNRNPUL2Q1KMD3 747 aaKnown RBP33.12■■■□□ 2.89
FOXA1-203ENST00000553751 CLIP1P30622 1438 aa33.11■■■□□ 2.89
FOXA1-203ENST00000553751 KDM6BO15054 1643 aa33.11■■■□□ 2.89
FOXA1-203ENST00000553751 CDK13Q14004 1512 aaKnown RBP33.09■■■□□ 2.89
FOXA1-203ENST00000553751 TEX14Q8IWB6 1497 aa33.08■■■□□ 2.89
FOXA1-203ENST00000553751 CD109Q6YHK3 1445 aa33.07■■■□□ 2.88
FOXA1-203ENST00000553751 ABCA9Q8IUA7 1624 aa33.06■■■□□ 2.88
FOXA1-203ENST00000553751 MAGI3Q5TCQ9 1506 aa33.05■■■□□ 2.88
FOXA1-203ENST00000553751 PCF11O94913 1555 aaKnown RBP33.01■■■□□ 2.88
FOXA1-203ENST00000553751 PLEKHD1A6NEE1 506 aa32.98■■■□□ 2.87
FOXA1-203ENST00000553751 LRRIQ1Q96JM4 1722 aa32.97■■■□□ 2.87
FOXA1-203ENST00000553751 CASKIN1Q8WXD9 1431 aa32.97■■■□□ 2.87
FOXA1-203ENST00000553751 ATP1B4Q9UN42 357 aaPredicted RBP32.96■■■□□ 2.87
FOXA1-203ENST00000553751 CEP162Q5TB80 1403 aa32.94■■■□□ 2.86
FOXA1-203ENST00000553751 COL17A1Q9UMD9 1497 aaPredicted RBP32.93■■■□□ 2.86
FOXA1-203ENST00000553751 FYCO1Q9BQS8 1478 aa32.9■■■□□ 2.86
FOXA1-203ENST00000553751 LOC105371045A0A1W2PR82 267 aa32.88■■■□□ 2.85
FOXA1-203ENST00000553751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.87■■■□□ 2.85
FOXA1-203ENST00000553751 TTC37Q6PGP7 1564 aa32.86■■■□□ 2.85
FOXA1-203ENST00000553751 CCDC18Q5T9S5 1454 aa32.86■■■□□ 2.85
FOXA1-203ENST00000553751 CDK11AQ9UQ88 783 aaPredicted RBP32.81■■■□□ 2.84
FOXA1-203ENST00000553751 TROQ12816 1431 aaPredicted RBP32.79■■■□□ 2.84
FOXA1-203ENST00000553751 NEO1Q92859 1461 aa32.78■■■□□ 2.84
FOXA1-203ENST00000553751 KIF14Q15058 1648 aa32.77■■■□□ 2.84
FOXA1-203ENST00000553751 ARAP3Q8WWN8 1544 aa32.77■■■□□ 2.84
FOXA1-203ENST00000553751 PHLDB1Q86UU1 1377 aa32.74■■■□□ 2.83
FOXA1-203ENST00000553751 FANCAO15360 1455 aa32.67■■■□□ 2.82
FOXA1-203ENST00000553751 CFAP74Q9C0B2 1584 aa32.67■■■□□ 2.82
FOXA1-203ENST00000553751 PLCH2O75038 1416 aa32.66■■■□□ 2.82
FOXA1-203ENST00000553751 MYO5CQ9NQX4 1742 aa32.65■■■□□ 2.82
FOXA1-203ENST00000553751 AKNAQ7Z591 1439 aa32.61■■■□□ 2.81
FOXA1-203ENST00000553751 FRMPD1Q5SYB0 1578 aa32.6■■■□□ 2.81
FOXA1-203ENST00000553751 VPS8Q8N3P4 1428 aa32.56■■■□□ 2.8
FOXA1-203ENST00000553751 RAPGEF3O95398 923 aa32.54■■■□□ 2.8
FOXA1-203ENST00000553751 DENND4BO75064 1496 aaPredicted RBP32.53■■■□□ 2.8
FOXA1-203ENST00000553751 RICTORQ6R327 1708 aa32.51■■■□□ 2.8
FOXA1-203ENST00000553751 PREX2Q70Z35 1606 aa32.51■■■□□ 2.79
FOXA1-203ENST00000553751 ADGRL1O94910 1474 aa32.5■■■□□ 2.79
FOXA1-203ENST00000553751 ARHGAP5Q13017 1502 aa32.5■■■□□ 2.79
FOXA1-203ENST00000553751 CDC42BPBQ9Y5S2 1711 aa32.48■■■□□ 2.79
FOXA1-203ENST00000553751 EFCAB2Q5VUJ9 269 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms