RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 EEA1Q15075 1411 aa19.94■□□□□ 0.78
TMEM253-202ENST00000553744 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
TMEM253-202ENST00000553744 KIAA0586Q9BVV6 1533 aa19.93■□□□□ 0.78
TMEM253-202ENST00000553744 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
TMEM253-202ENST00000553744 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
TMEM253-202ENST00000553744 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
TMEM253-202ENST00000553744 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
TMEM253-202ENST00000553744 JPH4Q96JJ6 628 aa19.86■□□□□ 0.77
TMEM253-202ENST00000553744 PRG4Q92954 1404 aaPredicted RBP19.85■□□□□ 0.77
TMEM253-202ENST00000553744 IQGAP2Q13576 1575 aa19.84■□□□□ 0.77
TMEM253-202ENST00000553744 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
TMEM253-202ENST00000553744 CTTNBP2Q8WZ74 1663 aa19.78■□□□□ 0.76
TMEM253-202ENST00000553744 KIF21BO75037 1637 aa19.74■□□□□ 0.75
TMEM253-202ENST00000553744 UGGT2Q9NYU1 1516 aa19.74■□□□□ 0.75
TMEM253-202ENST00000553744 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
TMEM253-202ENST00000553744 CARMIL2Q6F5E8 1435 aa19.7■□□□□ 0.74
TMEM253-202ENST00000553744 DISP1Q96F81 1524 aa19.69■□□□□ 0.74
TMEM253-202ENST00000553744 KIAA0556O60303 1618 aa19.65■□□□□ 0.74
TMEM253-202ENST00000553744 TNIKQ9UKE5 1360 aa19.64■□□□□ 0.73
TMEM253-202ENST00000553744 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
TMEM253-202ENST00000553744 PTPRGP23470 1445 aa19.61■□□□□ 0.73
TMEM253-202ENST00000553744 ADCY10Q96PN6 1610 aa19.56■□□□□ 0.72
TMEM253-202ENST00000553744 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
TMEM253-202ENST00000553744 TTBK1Q5TCY1 1321 aaPredicted RBP19.54■□□□□ 0.72
TMEM253-202ENST00000553744 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
TMEM253-202ENST00000553744 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
TMEM253-202ENST00000553744 UACAQ9BZF9 1416 aa19.5■□□□□ 0.71
TMEM253-202ENST00000553744 UHRF1BP1LA0JNW5 1464 aa19.49■□□□□ 0.71
TMEM253-202ENST00000553744 ABCC2Q92887 1545 aa19.48■□□□□ 0.71
TMEM253-202ENST00000553744 EFCAB5A4FU69 1503 aa19.47■□□□□ 0.71
TMEM253-202ENST00000553744 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
TMEM253-202ENST00000553744 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
TMEM253-202ENST00000553744 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
TMEM253-202ENST00000553744 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
TMEM253-202ENST00000553744 ABCA8O94911 1581 aa19.44■□□□□ 0.7
TMEM253-202ENST00000553744 PLB1Q6P1J6 1458 aa19.43■□□□□ 0.7
TMEM253-202ENST00000553744 FHOD3Q2V2M9 1422 aa19.42■□□□□ 0.7
TMEM253-202ENST00000553744 KDM5BQ9UGL1 1544 aa19.4■□□□□ 0.7
TMEM253-202ENST00000553744 ARHGAP35Q9NRY4 1499 aa19.37■□□□□ 0.69
TMEM253-202ENST00000553744 ZCCHC11Q5TAX3 1644 aaKnown RBP19.36■□□□□ 0.69
TMEM253-202ENST00000553744 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.69
TMEM253-202ENST00000553744 ABCC10Q5T3U5 1492 aa19.33■□□□□ 0.68
TMEM253-202ENST00000553744 ASXL2Q76L83 1435 aa19.32■□□□□ 0.68
TMEM253-202ENST00000553744 DIP2BQ9P265 1576 aa19.32■□□□□ 0.68
TMEM253-202ENST00000553744 KIF13AQ9H1H9 1805 aa19.3■□□□□ 0.68
TMEM253-202ENST00000553744 FMN1Q68DA7 1419 aa19.27■□□□□ 0.68
TMEM253-202ENST00000553744 NUP153P49790 1475 aaKnown RBP19.27■□□□□ 0.67
TMEM253-202ENST00000553744 CLIP1P30622 1438 aa19.25■□□□□ 0.67
TMEM253-202ENST00000553744 ATP10BO94823 1461 aa19.25■□□□□ 0.67
TMEM253-202ENST00000553744 WDR7Q9Y4E6 1490 aa19.24■□□□□ 0.67
TMEM253-202ENST00000553744 FAM69CQ0P6D2 419 aa19.24■□□□□ 0.67
TMEM253-202ENST00000553744 EPRSP07814 1512 aaKnown RBP19.21■□□□□ 0.67
TMEM253-202ENST00000553744 ARID3CA6NKF2 412 aa19.21■□□□□ 0.67
TMEM253-202ENST00000553744 GLI2P10070 1586 aa19.21■□□□□ 0.67
TMEM253-202ENST00000553744 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
TMEM253-202ENST00000553744 HECW1Q76N89 1606 aa19.19■□□□□ 0.66
TMEM253-202ENST00000553744 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
TMEM253-202ENST00000553744 PCF11O94913 1555 aaKnown RBP19.15■□□□□ 0.66
TMEM253-202ENST00000553744 CDK13Q14004 1512 aaKnown RBP19.14■□□□□ 0.65
TMEM253-202ENST00000553744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
TMEM253-202ENST00000553744 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
TMEM253-202ENST00000553744 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
TMEM253-202ENST00000553744 MAP3K4Q9Y6R4 1608 aa19.13■□□□□ 0.65
TMEM253-202ENST00000553744 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
TMEM253-202ENST00000553744 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
TMEM253-202ENST00000553744 KCNH8Q96L42 1107 aa19.09■□□□□ 0.65
TMEM253-202ENST00000553744 TSPOAP1O95153 1857 aa19.09■□□□□ 0.65
TMEM253-202ENST00000553744 PPRC1Q5VV67 1664 aaKnown RBP19.08■□□□□ 0.65
TMEM253-202ENST00000553744 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.64
TMEM253-202ENST00000553744 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.64
TMEM253-202ENST00000553744 CCDC18Q5T9S5 1454 aa19.06■□□□□ 0.64
TMEM253-202ENST00000553744 KDM4FA0A1W2PPD8 638 aa19.06■□□□□ 0.64
TMEM253-202ENST00000553744 PLEKHD1A6NEE1 506 aa19.06■□□□□ 0.64
TMEM253-202ENST00000553744 ABCA9Q8IUA7 1624 aa19.05■□□□□ 0.64
TMEM253-202ENST00000553744 CD109Q6YHK3 1445 aa19.04■□□□□ 0.64
TMEM253-202ENST00000553744 TEX14Q8IWB6 1497 aa19.03■□□□□ 0.64
TMEM253-202ENST00000553744 MAGI3Q5TCQ9 1506 aa19.02■□□□□ 0.64
TMEM253-202ENST00000553744 ILDR1Q86SU0 546 aaPredicted RBP19.02■□□□□ 0.64
TMEM253-202ENST00000553744 CDK11AQ9UQ88 783 aaPredicted RBP19■□□□□ 0.63
TMEM253-202ENST00000553744 KDM6BO15054 1643 aa18.98■□□□□ 0.63
TMEM253-202ENST00000553744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.98■□□□□ 0.63
TMEM253-202ENST00000553744 TROQ12816 1431 aaPredicted RBP18.98■□□□□ 0.63
TMEM253-202ENST00000553744 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
TMEM253-202ENST00000553744 TTC37Q6PGP7 1564 aa18.96■□□□□ 0.63
TMEM253-202ENST00000553744 KIF14Q15058 1648 aa18.95■□□□□ 0.62
TMEM253-202ENST00000553744 COL17A1Q9UMD9 1497 aaPredicted RBP18.89■□□□□ 0.61
TMEM253-202ENST00000553744 NEO1Q92859 1461 aa18.88■□□□□ 0.61
TMEM253-202ENST00000553744 CFAP74Q9C0B2 1584 aa18.86■□□□□ 0.61
TMEM253-202ENST00000553744 PHLDB1Q86UU1 1377 aa18.86■□□□□ 0.61
TMEM253-202ENST00000553744 PLCH2O75038 1416 aa18.85■□□□□ 0.61
TMEM253-202ENST00000553744 MYO5CQ9NQX4 1742 aa18.85■□□□□ 0.61
TMEM253-202ENST00000553744 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
TMEM253-202ENST00000553744 ARAP3Q8WWN8 1544 aa18.84■□□□□ 0.61
TMEM253-202ENST00000553744 FANCAO15360 1455 aa18.84■□□□□ 0.61
TMEM253-202ENST00000553744 MTUS2Q5JR59 1369 aa18.84■□□□□ 0.61
TMEM253-202ENST00000553744 TIAM1Q13009 1591 aa18.84■□□□□ 0.61
TMEM253-202ENST00000553744 PREX2Q70Z35 1606 aa18.8■□□□□ 0.6
TMEM253-202ENST00000553744 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
TMEM253-202ENST00000553744 MAP3K1Q13233 1512 aa18.79■□□□□ 0.6
TMEM253-202ENST00000553744 ARHGAP5Q13017 1502 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms