RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
ABCD4-218ENST00000553486 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
ABCD4-218ENST00000553486 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
ABCD4-218ENST00000553486 SHROOM2Q13796 1616 aa24.23■■□□□ 1.47
ABCD4-218ENST00000553486 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
ABCD4-218ENST00000553486 TNIKQ9UKE5 1360 aa24.2■■□□□ 1.46
ABCD4-218ENST00000553486 GOLGA3Q08378 1498 aa24.18■■□□□ 1.46
ABCD4-218ENST00000553486 KIF21BO75037 1637 aa24.15■■□□□ 1.46
ABCD4-218ENST00000553486 PRG4Q92954 1404 aaPredicted RBP24.13■■□□□ 1.45
ABCD4-218ENST00000553486 JPH4Q96JJ6 628 aa24.12■■□□□ 1.45
ABCD4-218ENST00000553486 UBTFP17480 764 aaKnown RBP24.1■■□□□ 1.45
ABCD4-218ENST00000553486 CEP162Q5TB80 1403 aa24.09■■□□□ 1.45
ABCD4-218ENST00000553486 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
ABCD4-218ENST00000553486 IGF1RP08069 1367 aa24.07■■□□□ 1.44
ABCD4-218ENST00000553486 CUL7Q14999 1698 aa23.98■■□□□ 1.43
ABCD4-218ENST00000553486 KIAA0586Q9BVV6 1533 aa23.98■■□□□ 1.43
ABCD4-218ENST00000553486 HRCP23327 699 aa23.97■■□□□ 1.43
ABCD4-218ENST00000553486 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
ABCD4-218ENST00000553486 CARMIL1Q5VZK9 1371 aa23.9■■□□□ 1.42
ABCD4-218ENST00000553486 PRXQ9BXM0 1461 aa23.88■■□□□ 1.41
ABCD4-218ENST00000553486 NPM1P06748 294 aaKnown RBP eCLIP23.85■■□□□ 1.41
ABCD4-218ENST00000553486 ADCY10Q96PN6 1610 aa23.83■■□□□ 1.41
ABCD4-218ENST00000553486 KIF13AQ9H1H9 1805 aa23.83■■□□□ 1.41
ABCD4-218ENST00000553486 MAPKBP1O60336 1514 aa23.82■■□□□ 1.4
ABCD4-218ENST00000553486 CLIP1P30622 1438 aa23.82■■□□□ 1.4
ABCD4-218ENST00000553486 ABCC10Q5T3U5 1492 aa23.81■■□□□ 1.4
ABCD4-218ENST00000553486 FAM69CQ0P6D2 419 aa23.78■■□□□ 1.4
ABCD4-218ENST00000553486 PPARGC1BQ86YN6 1023 aaKnown RBP23.76■■□□□ 1.39
ABCD4-218ENST00000553486 PTPRGP23470 1445 aa23.75■■□□□ 1.39
ABCD4-218ENST00000553486 CARMIL2Q6F5E8 1435 aa23.74■■□□□ 1.39
ABCD4-218ENST00000553486 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
ABCD4-218ENST00000553486 IQGAP2Q13576 1575 aa23.73■■□□□ 1.39
ABCD4-218ENST00000553486 DIP2BQ9P265 1576 aa23.73■■□□□ 1.39
ABCD4-218ENST00000553486 TTBK1Q5TCY1 1321 aaPredicted RBP23.68■■□□□ 1.38
ABCD4-218ENST00000553486 VPS8Q8N3P4 1428 aa23.66■■□□□ 1.38
ABCD4-218ENST00000553486 ABCC2Q92887 1545 aa23.64■■□□□ 1.37
ABCD4-218ENST00000553486 DISP1Q96F81 1524 aa23.63■■□□□ 1.37
ABCD4-218ENST00000553486 UGGT2Q9NYU1 1516 aa23.59■■□□□ 1.37
ABCD4-218ENST00000553486 UHRF1BP1LA0JNW5 1464 aa23.59■■□□□ 1.37
ABCD4-218ENST00000553486 UACAQ9BZF9 1416 aa23.57■■□□□ 1.36
ABCD4-218ENST00000553486 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
ABCD4-218ENST00000553486 ASXL2Q76L83 1435 aa23.55■■□□□ 1.36
ABCD4-218ENST00000553486 PLB1Q6P1J6 1458 aa23.53■■□□□ 1.36
ABCD4-218ENST00000553486 APLP2Q06481 763 aa23.52■■□□□ 1.36
ABCD4-218ENST00000553486 KIAA0556O60303 1618 aa23.51■■□□□ 1.35
ABCD4-218ENST00000553486 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
ABCD4-218ENST00000553486 KDM6BO15054 1643 aa23.5■■□□□ 1.35
ABCD4-218ENST00000553486 KDM5BQ9UGL1 1544 aa23.49■■□□□ 1.35
ABCD4-218ENST00000553486 TSPOAP1O95153 1857 aa23.48■■□□□ 1.35
ABCD4-218ENST00000553486 GLI2P10070 1586 aa23.46■■□□□ 1.35
ABCD4-218ENST00000553486 CTTNBP2Q8WZ74 1663 aa23.42■■□□□ 1.34
ABCD4-218ENST00000553486 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
ABCD4-218ENST00000553486 EPRSP07814 1512 aaKnown RBP23.4■■□□□ 1.34
ABCD4-218ENST00000553486 ZCCHC11Q5TAX3 1644 aaKnown RBP23.39■■□□□ 1.33
ABCD4-218ENST00000553486 PPRC1Q5VV67 1664 aaKnown RBP23.37■■□□□ 1.33
ABCD4-218ENST00000553486 MAP3K4Q9Y6R4 1608 aa23.32■■□□□ 1.32
ABCD4-218ENST00000553486 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
ABCD4-218ENST00000553486 ABCA8O94911 1581 aa23.3■■□□□ 1.32
ABCD4-218ENST00000553486 KDM4FA0A1W2PPD8 638 aa23.3■■□□□ 1.32
ABCD4-218ENST00000553486 TEX14Q8IWB6 1497 aa23.29■■□□□ 1.32
ABCD4-218ENST00000553486 COL17A1Q9UMD9 1497 aaPredicted RBP23.27■■□□□ 1.32
ABCD4-218ENST00000553486 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
ABCD4-218ENST00000553486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.19■■□□□ 1.3
ABCD4-218ENST00000553486 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
ABCD4-218ENST00000553486 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
ABCD4-218ENST00000553486 KCNH8Q96L42 1107 aa23.18■■□□□ 1.3
ABCD4-218ENST00000553486 CD109Q6YHK3 1445 aa23.18■■□□□ 1.3
ABCD4-218ENST00000553486 MAP3K1Q13233 1512 aa23.17■■□□□ 1.3
ABCD4-218ENST00000553486 MAGI3Q5TCQ9 1506 aa23.16■■□□□ 1.3
ABCD4-218ENST00000553486 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
ABCD4-218ENST00000553486 SAMD9Q5K651 1589 aa23.14■■□□□ 1.29
ABCD4-218ENST00000553486 CFAP43Q8NDM7 1665 aa23.13■■□□□ 1.29
ABCD4-218ENST00000553486 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
ABCD4-218ENST00000553486 ATP10BO94823 1461 aa23.12■■□□□ 1.29
ABCD4-218ENST00000553486 ADGRL1O94910 1474 aa23.11■■□□□ 1.29
ABCD4-218ENST00000553486 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
ABCD4-218ENST00000553486 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
ABCD4-218ENST00000553486 HNRNPUL2Q1KMD3 747 aaKnown RBP23.07■■□□□ 1.28
ABCD4-218ENST00000553486 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
ABCD4-218ENST00000553486 RAPGEF6Q8TEU7 1601 aa23.03■■□□□ 1.28
ABCD4-218ENST00000553486 FYCO1Q9BQS8 1478 aa23.03■■□□□ 1.28
ABCD4-218ENST00000553486 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
ABCD4-218ENST00000553486 RRBP1Q9P2E9 1410 aaKnown RBP23.02■■□□□ 1.28
ABCD4-218ENST00000553486 CASKIN1Q8WXD9 1431 aa23.02■■□□□ 1.28
ABCD4-218ENST00000553486 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
ABCD4-218ENST00000553486 LRRC9Q6ZRR7 1453 aa22.99■■□□□ 1.27
ABCD4-218ENST00000553486 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
ABCD4-218ENST00000553486 ABCA9Q8IUA7 1624 aa22.98■■□□□ 1.27
ABCD4-218ENST00000553486 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
ABCD4-218ENST00000553486 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
ABCD4-218ENST00000553486 CCNB3Q8WWL7 1395 aa22.93■■□□□ 1.26
ABCD4-218ENST00000553486 NEO1Q92859 1461 aa22.89■■□□□ 1.25
ABCD4-218ENST00000553486 PLEKHD1A6NEE1 506 aa22.86■■□□□ 1.25
ABCD4-218ENST00000553486 RAPGEF3O95398 923 aa22.85■■□□□ 1.25
ABCD4-218ENST00000553486 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
ABCD4-218ENST00000553486 HECW2Q9P2P5 1572 aa22.78■■□□□ 1.24
ABCD4-218ENST00000553486 FRMPD1Q5SYB0 1578 aa22.78■■□□□ 1.24
ABCD4-218ENST00000553486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.76■■□□□ 1.23
ABCD4-218ENST00000553486 CDK13Q14004 1512 aaKnown RBP22.75■■□□□ 1.23
ABCD4-218ENST00000553486 FANCAO15360 1455 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms