RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
CPSF2-202ENST00000553427 EEA1Q15075 1411 aa31.08■■■□□ 2.57
CPSF2-202ENST00000553427 PRXQ9BXM0 1461 aa31.05■■■□□ 2.56
CPSF2-202ENST00000553427 JPH4Q96JJ6 628 aa31.02■■■□□ 2.56
CPSF2-202ENST00000553427 ERCC6L2Q5T890 1561 aa31.01■■■□□ 2.56
CPSF2-202ENST00000553427 CYB5RLQ6IPT4 315 aa31.01■■■□□ 2.55
CPSF2-202ENST00000553427 PRG4Q92954 1404 aaPredicted RBP30.98■■■□□ 2.55
CPSF2-202ENST00000553427 IQGAP2Q13576 1575 aa30.93■■■□□ 2.54
CPSF2-202ENST00000553427 CSRNP3Q8WYN3 585 aa30.93■■■□□ 2.54
CPSF2-202ENST00000553427 UGGT2Q9NYU1 1516 aa30.8■■■□□ 2.52
CPSF2-202ENST00000553427 CTTNBP2Q8WZ74 1663 aa30.8■■■□□ 2.52
CPSF2-202ENST00000553427 CARMIL2Q6F5E8 1435 aa30.76■■■□□ 2.51
CPSF2-202ENST00000553427 KIF21BO75037 1637 aa30.73■■■□□ 2.51
CPSF2-202ENST00000553427 DISP1Q96F81 1524 aa30.72■■■□□ 2.51
CPSF2-202ENST00000553427 FAM9AQ8IZU1 332 aaPredicted RBP30.69■■■□□ 2.5
CPSF2-202ENST00000553427 TNIKQ9UKE5 1360 aa30.66■■■□□ 2.5
CPSF2-202ENST00000553427 KIAA0556O60303 1618 aa30.63■■■□□ 2.49
CPSF2-202ENST00000553427 PTPRGP23470 1445 aa30.62■■■□□ 2.49
CPSF2-202ENST00000553427 GOLGA3Q08378 1498 aa30.61■■■□□ 2.49
CPSF2-202ENST00000553427 ADCY10Q96PN6 1610 aa30.53■■■□□ 2.48
CPSF2-202ENST00000553427 UHRF1BP1LA0JNW5 1464 aa30.47■■■□□ 2.47
CPSF2-202ENST00000553427 SAMD9Q5K651 1589 aa30.45■■■□□ 2.47
CPSF2-202ENST00000553427 UACAQ9BZF9 1416 aa30.44■■■□□ 2.46
CPSF2-202ENST00000553427 ABCC2Q92887 1545 aa30.41■■■□□ 2.46
CPSF2-202ENST00000553427 MAPKBP1O60336 1514 aa30.4■■■□□ 2.46
CPSF2-202ENST00000553427 NPM1P06748 294 aaKnown RBP eCLIP30.37■■■□□ 2.45
CPSF2-202ENST00000553427 TTBK1Q5TCY1 1321 aaPredicted RBP30.37■■■□□ 2.45
CPSF2-202ENST00000553427 TRHP20396 242 aaPredicted RBP30.35■■■□□ 2.45
CPSF2-202ENST00000553427 EFCAB5A4FU69 1503 aa30.35■■■□□ 2.45
CPSF2-202ENST00000553427 UBTFP17480 764 aaKnown RBP30.32■■■□□ 2.44
CPSF2-202ENST00000553427 ABCA8O94911 1581 aa30.32■■■□□ 2.44
CPSF2-202ENST00000553427 KDM5BQ9UGL1 1544 aa30.3■■■□□ 2.44
CPSF2-202ENST00000553427 PLB1Q6P1J6 1458 aa30.29■■■□□ 2.44
CPSF2-202ENST00000553427 P3H3Q8IVL6 736 aa30.23■■■□□ 2.43
CPSF2-202ENST00000553427 ABCC10Q5T3U5 1492 aa30.22■■■□□ 2.43
CPSF2-202ENST00000553427 EHMT2Q96KQ7 1210 aa30.21■■■□□ 2.43
CPSF2-202ENST00000553427 FHOD3Q2V2M9 1422 aa30.21■■■□□ 2.43
CPSF2-202ENST00000553427 ZCCHC11Q5TAX3 1644 aaKnown RBP30.18■■■□□ 2.42
CPSF2-202ENST00000553427 DIP2BQ9P265 1576 aa30.17■■■□□ 2.42
CPSF2-202ENST00000553427 ASXL2Q76L83 1435 aa30.16■■■□□ 2.42
CPSF2-202ENST00000553427 RANGAP1P46060 587 aaPredicted RBP30.16■■■□□ 2.42
CPSF2-202ENST00000553427 KIF13AQ9H1H9 1805 aa30.16■■■□□ 2.42
CPSF2-202ENST00000553427 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
CPSF2-202ENST00000553427 RAPGEF6Q8TEU7 1601 aa30.12■■■□□ 2.41
CPSF2-202ENST00000553427 FAM69CQ0P6D2 419 aa30.06■■■□□ 2.4
CPSF2-202ENST00000553427 GLI2P10070 1586 aa30.04■■■□□ 2.4
CPSF2-202ENST00000553427 WDR7Q9Y4E6 1490 aa30.04■■■□□ 2.4
CPSF2-202ENST00000553427 FMN1Q68DA7 1419 aa30.04■■■□□ 2.4
CPSF2-202ENST00000553427 ATP10BO94823 1461 aa30.03■■■□□ 2.4
CPSF2-202ENST00000553427 NUP153P49790 1475 aaKnown RBP30.03■■■□□ 2.4
CPSF2-202ENST00000553427 EPRSP07814 1512 aaKnown RBP30.01■■■□□ 2.39
CPSF2-202ENST00000553427 CLIP1P30622 1438 aa29.95■■■□□ 2.38
CPSF2-202ENST00000553427 HECW1Q76N89 1606 aa29.88■■■□□ 2.37
CPSF2-202ENST00000553427 MAP3K4Q9Y6R4 1608 aa29.87■■■□□ 2.37
CPSF2-202ENST00000553427 ARID3CA6NKF2 412 aa29.87■■■□□ 2.37
CPSF2-202ENST00000553427 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
CPSF2-202ENST00000553427 CASKIN1Q8WXD9 1431 aa29.8■■■□□ 2.36
CPSF2-202ENST00000553427 PPRC1Q5VV67 1664 aaKnown RBP29.8■■■□□ 2.36
CPSF2-202ENST00000553427 CFAP43Q8NDM7 1665 aa29.79■■■□□ 2.36
CPSF2-202ENST00000553427 CDK13Q14004 1512 aaKnown RBP29.77■■■□□ 2.36
CPSF2-202ENST00000553427 TSPOAP1O95153 1857 aa29.77■■■□□ 2.36
CPSF2-202ENST00000553427 PCF11O94913 1555 aaKnown RBP29.77■■■□□ 2.36
CPSF2-202ENST00000553427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.76■■■□□ 2.35
CPSF2-202ENST00000553427 HNRNPUL2Q1KMD3 747 aaKnown RBP29.76■■■□□ 2.35
CPSF2-202ENST00000553427 KCNH8Q96L42 1107 aa29.75■■■□□ 2.35
CPSF2-202ENST00000553427 TEX14Q8IWB6 1497 aa29.74■■■□□ 2.35
CPSF2-202ENST00000553427 FYCO1Q9BQS8 1478 aa29.74■■■□□ 2.35
CPSF2-202ENST00000553427 MAGI3Q5TCQ9 1506 aa29.73■■■□□ 2.35
CPSF2-202ENST00000553427 LOC105371045A0A1W2PR82 267 aa29.73■■■□□ 2.35
CPSF2-202ENST00000553427 PLEKHD1A6NEE1 506 aa29.73■■■□□ 2.35
CPSF2-202ENST00000553427 ABCA9Q8IUA7 1624 aa29.73■■■□□ 2.35
CPSF2-202ENST00000553427 CD109Q6YHK3 1445 aa29.72■■■□□ 2.35
CPSF2-202ENST00000553427 CCDC18Q5T9S5 1454 aa29.7■■■□□ 2.35
CPSF2-202ENST00000553427 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
CPSF2-202ENST00000553427 LRRIQ1Q96JM4 1722 aa29.65■■■□□ 2.34
CPSF2-202ENST00000553427 KDM6BO15054 1643 aa29.65■■■□□ 2.34
CPSF2-202ENST00000553427 CDK11AQ9UQ88 783 aaPredicted RBP29.64■■■□□ 2.34
CPSF2-202ENST00000553427 TROQ12816 1431 aaPredicted RBP29.59■■■□□ 2.33
CPSF2-202ENST00000553427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.58■■■□□ 2.336e-6■■■■■ 38.2
CPSF2-202ENST00000553427 TTC37Q6PGP7 1564 aa29.53■■■□□ 2.32
CPSF2-202ENST00000553427 PHLDB1Q86UU1 1377 aa29.52■■■□□ 2.32
CPSF2-202ENST00000553427 KIF14Q15058 1648 aa29.52■■■□□ 2.32
CPSF2-202ENST00000553427 NEO1Q92859 1461 aa29.51■■■□□ 2.31
CPSF2-202ENST00000553427 COL17A1Q9UMD9 1497 aaPredicted RBP29.51■■■□□ 2.31
CPSF2-202ENST00000553427 VPS8Q8N3P4 1428 aa29.49■■■□□ 2.31
CPSF2-202ENST00000553427 ARAP3Q8WWN8 1544 aa29.47■■■□□ 2.31
CPSF2-202ENST00000553427 CFAP74Q9C0B2 1584 aa29.43■■■□□ 2.3
CPSF2-202ENST00000553427 PLCH2O75038 1416 aa29.42■■■□□ 2.3
CPSF2-202ENST00000553427 FANCAO15360 1455 aa29.4■■■□□ 2.3
CPSF2-202ENST00000553427 MYO5CQ9NQX4 1742 aa29.37■■■□□ 2.29
CPSF2-202ENST00000553427 AKNAQ7Z591 1439 aa29.34■■■□□ 2.29
CPSF2-202ENST00000553427 EHBP1L1Q8N3D4 1523 aa29.33■■■□□ 2.29
CPSF2-202ENST00000553427 MTUS2Q5JR59 1369 aa29.32■■■□□ 2.28
CPSF2-202ENST00000553427 TIAM1Q13009 1591 aa29.3■■■□□ 2.28
CPSF2-202ENST00000553427 MAP3K1Q13233 1512 aa29.3■■■□□ 2.28
CPSF2-202ENST00000553427 PREX2Q70Z35 1606 aa29.28■■■□□ 2.28
CPSF2-202ENST00000553427 EFCAB2Q5VUJ9 269 aa29.27■■■□□ 2.28
CPSF2-202ENST00000553427 DENND4BO75064 1496 aaPredicted RBP29.26■■■□□ 2.27
CPSF2-202ENST00000553427 FRMPD1Q5SYB0 1578 aa29.26■■■□□ 2.27
CPSF2-202ENST00000553427 ARHGAP5Q13017 1502 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms