RNA–Protein interactions for RNA: ENST00000553077.5

NFATC3-208, Transcript of nuclear factor of activated T cells 3, human

TSL 2

Gene NFATC3, Length 3,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFATC3-208	ENST00000553077	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.95	□□□□□ -0.18	8e-8	■□□□□ 8.4
NFATC3-208	ENST00000553077	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.94	□□□□□ -0.18
NFATC3-208	ENST00000553077	MRC2	Q9UBG0	1479 aa		13.93	□□□□□ -0.18
NFATC3-208	ENST00000553077	POLR3GL	Q9BT43	218 aa		13.93	□□□□□ -0.18
NFATC3-208	ENST00000553077	FHOD3	Q2V2M9	1422 aa		13.92	□□□□□ -0.18
NFATC3-208	ENST00000553077	URB2	Q14146	1524 aa	Known RBP	13.91	□□□□□ -0.18
NFATC3-208	ENST00000553077	ZNF326	Q5BKZ1	582 aa	Known RBP	13.91	□□□□□ -0.18
NFATC3-208	ENST00000553077	RRP7BP	Q9NSQ0	103 aa		13.91	□□□□□ -0.18
NFATC3-208	ENST00000553077	EEA1	Q15075	1411 aa		13.9	□□□□□ -0.18
NFATC3-208	ENST00000553077	TNIK	Q9UKE5	1360 aa		13.9	□□□□□ -0.18
NFATC3-208	ENST00000553077	PEG3	Q9GZU2	1588 aa		13.86	□□□□□ -0.19
NFATC3-208	ENST00000553077	HRC	P23327	699 aa		13.83	□□□□□ -0.2
NFATC3-208	ENST00000553077	MLEC	Q14165	292 aa		13.83	□□□□□ -0.2
NFATC3-208	ENST00000553077	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.83	□□□□□ -0.2
NFATC3-208	ENST00000553077	LAMC3	Q9Y6N6	1575 aa		13.8	□□□□□ -0.2
NFATC3-208	ENST00000553077	CHGA	P10645	457 aa	Known RBP	13.8	□□□□□ -0.2
NFATC3-208	ENST00000553077	SNAPC4	Q5SXM2	1469 aa		13.79	□□□□□ -0.2
NFATC3-208	ENST00000553077	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.77	□□□□□ -0.2
NFATC3-208	ENST00000553077	TSPY4	P0CV99	314 aa		13.76	□□□□□ -0.21
NFATC3-208	ENST00000553077	TSPY10	P0CW01	314 aa		13.76	□□□□□ -0.21
NFATC3-208	ENST00000553077	GRIN2B	Q13224	1484 aa		13.75	□□□□□ -0.21
NFATC3-208	ENST00000553077	BCAN	Q96GW7	911 aa		13.74	□□□□□ -0.21
NFATC3-208	ENST00000553077	PTPRG	P23470	1445 aa		13.74	□□□□□ -0.21
NFATC3-208	ENST00000553077	CARMIL2	Q6F5E8	1435 aa		13.73	□□□□□ -0.21
NFATC3-208	ENST00000553077	IFT140	Q96RY7	1462 aa		13.73	□□□□□ -0.21
NFATC3-208	ENST00000553077	DNMBP	Q6XZF7	1577 aa		13.72	□□□□□ -0.21
NFATC3-208	ENST00000553077	ESF1	Q9H501	851 aa	Known RBP	13.71	□□□□□ -0.21
NFATC3-208	ENST00000553077	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	1e-6	■■■■■ 29.1
NFATC3-208	ENST00000553077	TOP2B	Q02880	1626 aa		13.7	□□□□□ -0.22
NFATC3-208	ENST00000553077	PRG4	Q92954	1404 aa	Predicted RBP	13.68	□□□□□ -0.22
NFATC3-208	ENST00000553077	FHAD1	B1AJZ9	1412 aa		13.68	□□□□□ -0.22
NFATC3-208	ENST00000553077	KIF21A	Q7Z4S6	1674 aa		13.68	□□□□□ -0.22
NFATC3-208	ENST00000553077	FAM69C	Q0P6D2	419 aa		13.67	□□□□□ -0.22
NFATC3-208	ENST00000553077	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.67	□□□□□ -0.22
NFATC3-208	ENST00000553077	ZNF644	Q9H582	1327 aa	Predicted RBP	13.66	□□□□□ -0.22
NFATC3-208	ENST00000553077	FOXD1	Q16676	465 aa		13.65	□□□□□ -0.23
NFATC3-208	ENST00000553077	KDM2A	Q9Y2K7	1162 aa		13.64	□□□□□ -0.23
NFATC3-208	ENST00000553077	GGT6	Q6P531	493 aa		13.64	□□□□□ -0.23
NFATC3-208	ENST00000553077	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.64	□□□□□ -0.23
NFATC3-208	ENST00000553077	CCNB3	Q8WWL7	1395 aa		13.63	□□□□□ -0.23
NFATC3-208	ENST00000553077	RGL3	Q3MIN7	710 aa		13.63	□□□□□ -0.23
NFATC3-208	ENST00000553077	VPS8	Q8N3P4	1428 aa		13.62	□□□□□ -0.23
NFATC3-208	ENST00000553077	STAG3	Q9UJ98	1225 aa		13.62	□□□□□ -0.23
NFATC3-208	ENST00000553077	ABCA10	Q8WWZ4	1543 aa		13.6	□□□□□ -0.23
NFATC3-208	ENST00000553077	PLEKHG5	O94827	1062 aa		13.57	□□□□□ -0.24
NFATC3-208	ENST00000553077	PRX	Q9BXM0	1461 aa		13.57	□□□□□ -0.24
NFATC3-208	ENST00000553077	YTHDC1	Q96MU7	727 aa	Known RBP	13.57	□□□□□ -0.24
NFATC3-208	ENST00000553077	ARAP1	Q96P48	1450 aa		13.56	□□□□□ -0.24
NFATC3-208	ENST00000553077	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.56	□□□□□ -0.24
NFATC3-208	ENST00000553077	SIN3A	Q96ST3	1273 aa		13.55	□□□□□ -0.24
NFATC3-208	ENST00000553077	FMN1	Q68DA7	1419 aa		13.55	□□□□□ -0.24
NFATC3-208	ENST00000553077	AFAP1	Q8N556	730 aa		13.53	□□□□□ -0.24
NFATC3-208	ENST00000553077	EFCAB2	Q5VUJ9	269 aa		13.52	□□□□□ -0.25
NFATC3-208	ENST00000553077	ARHGAP35	Q9NRY4	1499 aa		13.51	□□□□□ -0.25
NFATC3-208	ENST00000553077	ZEB1	P37275	1124 aa	Predicted RBP	13.5	□□□□□ -0.25
NFATC3-208	ENST00000553077	GRIN2A	Q12879	1464 aa		13.5	□□□□□ -0.25
NFATC3-208	ENST00000553077	PRDM2	Q13029	1718 aa		13.5	□□□□□ -0.25
NFATC3-208	ENST00000553077	RAPGEF3	O95398	923 aa		13.49	□□□□□ -0.25
NFATC3-208	ENST00000553077	SYNJ2	O15056	1496 aa		13.49	□□□□□ -0.25
NFATC3-208	ENST00000553077	PLB1	Q6P1J6	1458 aa		13.49	□□□□□ -0.25
NFATC3-208	ENST00000553077	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.48	□□□□□ -0.25
NFATC3-208	ENST00000553077	KIF3B	O15066	747 aa		13.48	□□□□□ -0.25
NFATC3-208	ENST00000553077	KIF21B	O75037	1637 aa		13.45	□□□□□ -0.26
NFATC3-208	ENST00000553077	KIAA0586	Q9BVV6	1533 aa		13.42	□□□□□ -0.26
NFATC3-208	ENST00000553077	SPAG9	O60271	1321 aa	Known RBP	13.41	□□□□□ -0.26
NFATC3-208	ENST00000553077	CDK13	Q14004	1512 aa	Known RBP	13.41	□□□□□ -0.26
NFATC3-208	ENST00000553077	PHLDB1	Q86UU1	1377 aa		13.4	□□□□□ -0.26
NFATC3-208	ENST00000553077	WDR62	O43379	1518 aa		13.39	□□□□□ -0.27
NFATC3-208	ENST00000553077	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.39	□□□□□ -0.27
NFATC3-208	ENST00000553077	EIF4G3	O43432	1585 aa	Known RBP	13.39	□□□□□ -0.27
NFATC3-208	ENST00000553077	BIVM-ERCC5	R4GMW8	1640 aa		13.38	□□□□□ -0.27
NFATC3-208	ENST00000553077	PKD2	Q13563	968 aa		13.37	□□□□□ -0.27
NFATC3-208	ENST00000553077	PPP1R15A	O75807	674 aa	Predicted RBP	13.36	□□□□□ -0.27
NFATC3-208	ENST00000553077	TONSL	Q96HA7	1378 aa		13.35	□□□□□ -0.27
NFATC3-208	ENST00000553077	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
NFATC3-208	ENST00000553077	ERICH3	Q5RHP9	1530 aa		13.34	□□□□□ -0.27
NFATC3-208	ENST00000553077	SENP3-EIF4A1	A0A087X0R7	540 aa		13.34	□□□□□ -0.27
NFATC3-208	ENST00000553077	IQGAP2	Q13576	1575 aa		13.33	□□□□□ -0.28
NFATC3-208	ENST00000553077	NUP155	O75694	1391 aa		13.32	□□□□□ -0.28
NFATC3-208	ENST00000553077	CCDC18	Q5T9S5	1454 aa		13.32	□□□□□ -0.28
NFATC3-208	ENST00000553077	UACA	Q9BZF9	1416 aa		13.31	□□□□□ -0.28
NFATC3-208	ENST00000553077	WASHC2C	Q9Y4E1	1318 aa		13.31	□□□□□ -0.28
NFATC3-208	ENST00000553077	RAB3GAP2	Q9H2M9	1393 aa		13.29	□□□□□ -0.28
NFATC3-208	ENST00000553077	DCAF11	Q8TEB1	546 aa		13.29	□□□□□ -0.28
NFATC3-208	ENST00000553077	CASKIN1	Q8WXD9	1431 aa		13.27	□□□□□ -0.28
NFATC3-208	ENST00000553077	C14orf37	Q86TY3	774 aa		13.27	□□□□□ -0.29
NFATC3-208	ENST00000553077	STK26	Q9P289	416 aa		13.27	□□□□□ -0.29
NFATC3-208	ENST00000553077	MPHOSPH9	Q99550	1183 aa		13.26	□□□□□ -0.29
NFATC3-208	ENST00000553077	DDX10	Q13206	875 aa	Known RBP	13.26	□□□□□ -0.29
NFATC3-208	ENST00000553077	ARHGEF11	O15085	1522 aa		13.25	□□□□□ -0.29
NFATC3-208	ENST00000553077	TARBP1	Q13395	1621 aa	Known RBP	13.25	□□□□□ -0.29
NFATC3-208	ENST00000553077	NCOA2	Q15596	1464 aa		13.25	□□□□□ -0.29
NFATC3-208	ENST00000553077	LRRC9	Q6ZRR7	1453 aa		13.25	□□□□□ -0.29
NFATC3-208	ENST00000553077	SCAPER	Q9BY12	1400 aa		13.24	□□□□□ -0.29
NFATC3-208	ENST00000553077	THOC2	Q8NI27	1593 aa	Known RBP	13.24	□□□□□ -0.29
NFATC3-208	ENST00000553077	SCAF1	Q9H7N4	1312 aa	Known RBP	13.23	□□□□□ -0.29
NFATC3-208	ENST00000553077	DIEXF	Q68CQ4	756 aa	Known RBP	13.23	□□□□□ -0.29
NFATC3-208	ENST00000553077	PELP1	Q8IZL8	1130 aa	Known RBP	13.22	□□□□□ -0.29
NFATC3-208	ENST00000553077	NUTM2F	A1L443	756 aa		13.22	□□□□□ -0.29
NFATC3-208	ENST00000553077	EPRS	P07814	1512 aa	Known RBP	13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms