RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
TRAFD1-209ENST00000552896 EEA1Q15075 1411 aa19.77■□□□□ 0.76
TRAFD1-209ENST00000552896 CTTNBP2Q8WZ74 1663 aa19.75■□□□□ 0.75
TRAFD1-209ENST00000552896 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
TRAFD1-209ENST00000552896 FOXD1Q16676 465 aa19.72■□□□□ 0.75
TRAFD1-209ENST00000552896 PRXQ9BXM0 1461 aa19.71■□□□□ 0.75
TRAFD1-209ENST00000552896 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
TRAFD1-209ENST00000552896 ARAP1Q96P48 1450 aa19.7■□□□□ 0.74
TRAFD1-209ENST00000552896 IQGAP2Q13576 1575 aa19.7■□□□□ 0.74
TRAFD1-209ENST00000552896 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
TRAFD1-209ENST00000552896 KIF21BO75037 1637 aa19.65■□□□□ 0.74
TRAFD1-209ENST00000552896 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
TRAFD1-209ENST00000552896 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
TRAFD1-209ENST00000552896 UGGT2Q9NYU1 1516 aa19.56■□□□□ 0.72
TRAFD1-209ENST00000552896 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
TRAFD1-209ENST00000552896 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
TRAFD1-209ENST00000552896 DISP1Q96F81 1524 aa19.49■□□□□ 0.71
TRAFD1-209ENST00000552896 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
TRAFD1-209ENST00000552896 CARMIL2Q6F5E8 1435 aa19.48■□□□□ 0.71
TRAFD1-209ENST00000552896 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
TRAFD1-209ENST00000552896 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
TRAFD1-209ENST00000552896 SAMD9Q5K651 1589 aa19.43■□□□□ 0.7
TRAFD1-209ENST00000552896 ADCY10Q96PN6 1610 aa19.41■□□□□ 0.7
TRAFD1-209ENST00000552896 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.69
TRAFD1-209ENST00000552896 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
TRAFD1-209ENST00000552896 PTPRGP23470 1445 aa19.34■□□□□ 0.69
TRAFD1-209ENST00000552896 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
TRAFD1-209ENST00000552896 UHRF1BP1LA0JNW5 1464 aa19.29■□□□□ 0.68
TRAFD1-209ENST00000552896 MAPKBP1O60336 1514 aa19.27■□□□□ 0.68
TRAFD1-209ENST00000552896 ABCA8O94911 1581 aa19.27■□□□□ 0.67
TRAFD1-209ENST00000552896 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
TRAFD1-209ENST00000552896 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
TRAFD1-209ENST00000552896 ZCCHC11Q5TAX3 1644 aaKnown RBP19.23■□□□□ 0.67
TRAFD1-209ENST00000552896 UBTFP17480 764 aaKnown RBP19.21■□□□□ 0.67
TRAFD1-209ENST00000552896 RAPGEF6Q8TEU7 1601 aa19.21■□□□□ 0.67
TRAFD1-209ENST00000552896 PLB1Q6P1J6 1458 aa19.21■□□□□ 0.67
TRAFD1-209ENST00000552896 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
TRAFD1-209ENST00000552896 FHOD3Q2V2M9 1422 aa19.18■□□□□ 0.66
TRAFD1-209ENST00000552896 TTBK1Q5TCY1 1321 aaPredicted RBP19.18■□□□□ 0.66
TRAFD1-209ENST00000552896 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
TRAFD1-209ENST00000552896 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
TRAFD1-209ENST00000552896 DIP2BQ9P265 1576 aa19.15■□□□□ 0.66
TRAFD1-209ENST00000552896 NPM1P06748 294 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRAFD1-209ENST00000552896 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
TRAFD1-209ENST00000552896 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
TRAFD1-209ENST00000552896 ABCC10Q5T3U5 1492 aa19.09■□□□□ 0.65
TRAFD1-209ENST00000552896 HECW1Q76N89 1606 aa19.08■□□□□ 0.65
TRAFD1-209ENST00000552896 FMN1Q68DA7 1419 aa19.08■□□□□ 0.64
TRAFD1-209ENST00000552896 ASXL2Q76L83 1435 aa19.08■□□□□ 0.64
TRAFD1-209ENST00000552896 NUP153P49790 1475 aaKnown RBP19.07■□□□□ 0.64
TRAFD1-209ENST00000552896 TRHP20396 242 aaPredicted RBP19.06■□□□□ 0.64
TRAFD1-209ENST00000552896 CLIP1P30622 1438 aa19.05■□□□□ 0.64
TRAFD1-209ENST00000552896 GLI2P10070 1586 aa19.05■□□□□ 0.64
TRAFD1-209ENST00000552896 WDR7Q9Y4E6 1490 aa19.04■□□□□ 0.64
TRAFD1-209ENST00000552896 LRRIQ1Q96JM4 1722 aa19.03■□□□□ 0.64
TRAFD1-209ENST00000552896 PCF11O94913 1555 aaKnown RBP19.02■□□□□ 0.64
TRAFD1-209ENST00000552896 ATP10BO94823 1461 aa19.01■□□□□ 0.63
TRAFD1-209ENST00000552896 CEP162Q5TB80 1403 aa19■□□□□ 0.63
TRAFD1-209ENST00000552896 MAP3K4Q9Y6R4 1608 aa19■□□□□ 0.63
TRAFD1-209ENST00000552896 TSPOAP1O95153 1857 aa19■□□□□ 0.63
TRAFD1-209ENST00000552896 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
TRAFD1-209ENST00000552896 CFAP43Q8NDM7 1665 aa18.98■□□□□ 0.63
TRAFD1-209ENST00000552896 PPRC1Q5VV67 1664 aaKnown RBP18.98■□□□□ 0.63
TRAFD1-209ENST00000552896 FYCO1Q9BQS8 1478 aa18.96■□□□□ 0.63
TRAFD1-209ENST00000552896 CDK13Q14004 1512 aaKnown RBP18.95■□□□□ 0.62
TRAFD1-209ENST00000552896 CASKIN1Q8WXD9 1431 aa18.93■□□□□ 0.62
TRAFD1-209ENST00000552896 ABCA9Q8IUA7 1624 aa18.92■□□□□ 0.62
TRAFD1-209ENST00000552896 FAM69CQ0P6D2 419 aa18.92■□□□□ 0.62
TRAFD1-209ENST00000552896 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
TRAFD1-209ENST00000552896 ARID3CA6NKF2 412 aa18.88■□□□□ 0.61
TRAFD1-209ENST00000552896 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
TRAFD1-209ENST00000552896 TEX14Q8IWB6 1497 aa18.84■□□□□ 0.61
TRAFD1-209ENST00000552896 KIF14Q15058 1648 aa18.83■□□□□ 0.61
TRAFD1-209ENST00000552896 TTC37Q6PGP7 1564 aa18.82■□□□□ 0.6
TRAFD1-209ENST00000552896 MAGI3Q5TCQ9 1506 aa18.82■□□□□ 0.6
TRAFD1-209ENST00000552896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
TRAFD1-209ENST00000552896 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
TRAFD1-209ENST00000552896 KDM6BO15054 1643 aa18.81■□□□□ 0.6
TRAFD1-209ENST00000552896 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
TRAFD1-209ENST00000552896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
TRAFD1-209ENST00000552896 CD109Q6YHK3 1445 aa18.78■□□□□ 0.6
TRAFD1-209ENST00000552896 VPS8Q8N3P4 1428 aa18.78■□□□□ 0.6
TRAFD1-209ENST00000552896 CFAP74Q9C0B2 1584 aa18.77■□□□□ 0.6
TRAFD1-209ENST00000552896 TROQ12816 1431 aaPredicted RBP18.77■□□□□ 0.6
TRAFD1-209ENST00000552896 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
TRAFD1-209ENST00000552896 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
TRAFD1-209ENST00000552896 ATP1B4Q9UN42 357 aaPredicted RBP18.76■□□□□ 0.59
TRAFD1-209ENST00000552896 CDK11AQ9UQ88 783 aaPredicted RBP18.74■□□□□ 0.59
TRAFD1-209ENST00000552896 ARAP3Q8WWN8 1544 aa18.72■□□□□ 0.59
TRAFD1-209ENST00000552896 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
TRAFD1-209ENST00000552896 EHBP1L1Q8N3D4 1523 aa18.71■□□□□ 0.59
TRAFD1-209ENST00000552896 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
TRAFD1-209ENST00000552896 PREX2Q70Z35 1606 aa18.71■□□□□ 0.58
TRAFD1-209ENST00000552896 CDC42BPAQ5VT25 1732 aa18.7■□□□□ 0.58
TRAFD1-209ENST00000552896 NEO1Q92859 1461 aa18.69■□□□□ 0.58
TRAFD1-209ENST00000552896 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
TRAFD1-209ENST00000552896 MAP3K1Q13233 1512 aa18.66■□□□□ 0.58
TRAFD1-209ENST00000552896 ITSN2Q9NZM3 1697 aa18.64■□□□□ 0.57
TRAFD1-209ENST00000552896 SUPT6HQ7KZ85 1726 aaKnown RBP18.64■□□□□ 0.57
TRAFD1-209ENST00000552896 PHLDB1Q86UU1 1377 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms