RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 PRXQ9BXM0 1461 aa13.1□□□□□ -0.31
NPAS3-213ENST00000552874 EEA1Q15075 1411 aa13.08□□□□□ -0.32
NPAS3-213ENST00000552874 KIF21BO75037 1637 aa13.08□□□□□ -0.32
NPAS3-213ENST00000552874 RAPGEF2Q9Y4G8 1499 aa13.03□□□□□ -0.32
NPAS3-213ENST00000552874 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.33
NPAS3-213ENST00000552874 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.33
NPAS3-213ENST00000552874 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.33
NPAS3-213ENST00000552874 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.33
NPAS3-213ENST00000552874 IQGAP2Q13576 1575 aa12.98□□□□□ -0.33
NPAS3-213ENST00000552874 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
NPAS3-213ENST00000552874 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
NPAS3-213ENST00000552874 CHMP7Q8WUX9 453 aaPredicted RBP12.96□□□□□ -0.33
NPAS3-213ENST00000552874 KIAA0586Q9BVV6 1533 aa12.96□□□□□ -0.33
NPAS3-213ENST00000552874 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
NPAS3-213ENST00000552874 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
NPAS3-213ENST00000552874 UGGT2Q9NYU1 1516 aa12.93□□□□□ -0.34
NPAS3-213ENST00000552874 FBLN2P98095 1184 aa12.92□□□□□ -0.34
NPAS3-213ENST00000552874 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
NPAS3-213ENST00000552874 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
NPAS3-213ENST00000552874 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
NPAS3-213ENST00000552874 KIAA0556O60303 1618 aa12.9□□□□□ -0.34
NPAS3-213ENST00000552874 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
NPAS3-213ENST00000552874 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
NPAS3-213ENST00000552874 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-213ENST00000552874 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-213ENST00000552874 EFCAB5A4FU69 1503 aa12.8□□□□□ -0.36
NPAS3-213ENST00000552874 ADCY10Q96PN6 1610 aa12.79□□□□□ -0.36
NPAS3-213ENST00000552874 JPH4Q96JJ6 628 aa12.77□□□□□ -0.37
NPAS3-213ENST00000552874 ABCA8O94911 1581 aa12.74□□□□□ -0.37
NPAS3-213ENST00000552874 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
NPAS3-213ENST00000552874 ARHGAP35Q9NRY4 1499 aa12.73□□□□□ -0.37
NPAS3-213ENST00000552874 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.37
NPAS3-213ENST00000552874 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
NPAS3-213ENST00000552874 ABCC2Q92887 1545 aa12.7□□□□□ -0.38
NPAS3-213ENST00000552874 RAPGEF6Q8TEU7 1601 aa12.7□□□□□ -0.38
NPAS3-213ENST00000552874 UHRF1BP1LA0JNW5 1464 aa12.69□□□□□ -0.38
NPAS3-213ENST00000552874 ZCCHC11Q5TAX3 1644 aaKnown RBP12.68□□□□□ -0.38
NPAS3-213ENST00000552874 FHOD3Q2V2M9 1422 aa12.68□□□□□ -0.38
NPAS3-213ENST00000552874 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
NPAS3-213ENST00000552874 PLB1Q6P1J6 1458 aa12.65□□□□□ -0.38
NPAS3-213ENST00000552874 PCF11O94913 1555 aaKnown RBP12.65□□□□□ -0.38
NPAS3-213ENST00000552874 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
NPAS3-213ENST00000552874 MAPKBP1O60336 1514 aa12.64□□□□□ -0.39
NPAS3-213ENST00000552874 PTPRGP23470 1445 aa12.63□□□□□ -0.39
NPAS3-213ENST00000552874 CEP162Q5TB80 1403 aa12.63□□□□□ -0.39
NPAS3-213ENST00000552874 KDM5BQ9UGL1 1544 aa12.63□□□□□ -0.39
NPAS3-213ENST00000552874 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
NPAS3-213ENST00000552874 NUP153P49790 1475 aaKnown RBP12.61□□□□□ -0.39
NPAS3-213ENST00000552874 HECW1Q76N89 1606 aa12.61□□□□□ -0.39
NPAS3-213ENST00000552874 CLIP1P30622 1438 aa12.61□□□□□ -0.39
NPAS3-213ENST00000552874 CYB5RLQ6IPT4 315 aa12.6□□□□□ -0.39
NPAS3-213ENST00000552874 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
NPAS3-213ENST00000552874 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
NPAS3-213ENST00000552874 DIP2BQ9P265 1576 aa12.59□□□□□ -0.39
NPAS3-213ENST00000552874 SCAF1Q9H7N4 1312 aaKnown RBP12.58□□□□□ -0.4
NPAS3-213ENST00000552874 CFAP43Q8NDM7 1665 aa12.57□□□□□ -0.4
NPAS3-213ENST00000552874 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
NPAS3-213ENST00000552874 LOC105371045A0A1W2PR82 267 aa12.56□□□□□ -0.4
NPAS3-213ENST00000552874 FMN1Q68DA7 1419 aa12.55□□□□□ -0.4
NPAS3-213ENST00000552874 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
NPAS3-213ENST00000552874 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
NPAS3-213ENST00000552874 CDK13Q14004 1512 aaKnown RBP12.54□□□□□ -0.4
NPAS3-213ENST00000552874 CASKIN1Q8WXD9 1431 aa12.53□□□□□ -0.4
NPAS3-213ENST00000552874 ATP10BO94823 1461 aa12.53□□□□□ -0.4
NPAS3-213ENST00000552874 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
NPAS3-213ENST00000552874 EPRSP07814 1512 aaKnown RBP12.52□□□□□ -0.41
NPAS3-213ENST00000552874 GLI2P10070 1586 aa12.52□□□□□ -0.41
NPAS3-213ENST00000552874 MAP3K4Q9Y6R4 1608 aa12.51□□□□□ -0.41
NPAS3-213ENST00000552874 MAGI3Q5TCQ9 1506 aa12.5□□□□□ -0.41
NPAS3-213ENST00000552874 ABCC10Q5T3U5 1492 aa12.49□□□□□ -0.41
NPAS3-213ENST00000552874 WDR7Q9Y4E6 1490 aa12.49□□□□□ -0.41
NPAS3-213ENST00000552874 ASXL2Q76L83 1435 aa12.49□□□□□ -0.41
NPAS3-213ENST00000552874 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
NPAS3-213ENST00000552874 VPS8Q8N3P4 1428 aa12.48□□□□□ -0.41
NPAS3-213ENST00000552874 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
NPAS3-213ENST00000552874 KIF14Q15058 1648 aa12.47□□□□□ -0.41
NPAS3-213ENST00000552874 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
NPAS3-213ENST00000552874 TTC37Q6PGP7 1564 aa12.46□□□□□ -0.42
NPAS3-213ENST00000552874 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
NPAS3-213ENST00000552874 TSPOAP1O95153 1857 aa12.45□□□□□ -0.42
NPAS3-213ENST00000552874 TIAM1Q13009 1591 aa12.45□□□□□ -0.42
NPAS3-213ENST00000552874 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
NPAS3-213ENST00000552874 MYO5CQ9NQX4 1742 aa12.42□□□□□ -0.42
NPAS3-213ENST00000552874 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
NPAS3-213ENST00000552874 PPP4R3CPQ6ZMV5 832 aa12.41□□□□□ -0.42
NPAS3-213ENST00000552874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.41□□□□□ -0.42
NPAS3-213ENST00000552874 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
NPAS3-213ENST00000552874 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.43
NPAS3-213ENST00000552874 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
NPAS3-213ENST00000552874 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
NPAS3-213ENST00000552874 SUPT6HQ7KZ85 1726 aaKnown RBP12.35□□□□□ -0.43
NPAS3-213ENST00000552874 ARAP3Q8WWN8 1544 aa12.35□□□□□ -0.43
NPAS3-213ENST00000552874 ARID3CA6NKF2 412 aa12.34□□□□□ -0.43
NPAS3-213ENST00000552874 ITSN2Q9NZM3 1697 aa12.33□□□□□ -0.44
NPAS3-213ENST00000552874 CFAP74Q9C0B2 1584 aa12.33□□□□□ -0.44
NPAS3-213ENST00000552874 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
NPAS3-213ENST00000552874 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
NPAS3-213ENST00000552874 RICTORQ6R327 1708 aa12.31□□□□□ -0.44
NPAS3-213ENST00000552874 FRMPD1Q5SYB0 1578 aa12.31□□□□□ -0.44
NPAS3-213ENST00000552874 SAMD9LQ8IVG5 1584 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms