RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 DIEXFQ68CQ4 756 aaKnown RBP16.55■□□□□ 0.24
TUBA1C-209ENST00000552448 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
TUBA1C-209ENST00000552448 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
TUBA1C-209ENST00000552448 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
TUBA1C-209ENST00000552448 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
TUBA1C-209ENST00000552448 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.23
TUBA1C-209ENST00000552448 CTTNBP2Q8WZ74 1663 aa16.43■□□□□ 0.22
TUBA1C-209ENST00000552448 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
TUBA1C-209ENST00000552448 APLP2Q06481 763 aa16.42■□□□□ 0.22
TUBA1C-209ENST00000552448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
TUBA1C-209ENST00000552448 ARHGAP35Q9NRY4 1499 aa16.41■□□□□ 0.22
TUBA1C-209ENST00000552448 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
TUBA1C-209ENST00000552448 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
TUBA1C-209ENST00000552448 EIF4G3O43432 1585 aaKnown RBP16.39■□□□□ 0.21
TUBA1C-209ENST00000552448 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.216e-11■■■□□ 19.2
TUBA1C-209ENST00000552448 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
TUBA1C-209ENST00000552448 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
TUBA1C-209ENST00000552448 EFCAB5A4FU69 1503 aa16.34■□□□□ 0.21
TUBA1C-209ENST00000552448 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
TUBA1C-209ENST00000552448 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
TUBA1C-209ENST00000552448 KANK4Q5T7N3 995 aaPredicted RBP16.29■□□□□ 0.2
TUBA1C-209ENST00000552448 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
TUBA1C-209ENST00000552448 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
TUBA1C-209ENST00000552448 SAMD9Q5K651 1589 aa16.24■□□□□ 0.19
TUBA1C-209ENST00000552448 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
TUBA1C-209ENST00000552448 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
TUBA1C-209ENST00000552448 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
TUBA1C-209ENST00000552448 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
TUBA1C-209ENST00000552448 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
TUBA1C-209ENST00000552448 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
TUBA1C-209ENST00000552448 KIAA0586Q9BVV6 1533 aa16.17■□□□□ 0.18
TUBA1C-209ENST00000552448 FMN1Q68DA7 1419 aa16.17■□□□□ 0.18
TUBA1C-209ENST00000552448 UGGT2Q9NYU1 1516 aa16.16■□□□□ 0.18
TUBA1C-209ENST00000552448 FYCO1Q9BQS8 1478 aa16.14■□□□□ 0.17
TUBA1C-209ENST00000552448 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
TUBA1C-209ENST00000552448 CHMP7Q8WUX9 453 aaPredicted RBP16.14■□□□□ 0.17
TUBA1C-209ENST00000552448 FHOD3Q2V2M9 1422 aa16.13■□□□□ 0.17
TUBA1C-209ENST00000552448 P3H3Q8IVL6 736 aa16.13■□□□□ 0.17
TUBA1C-209ENST00000552448 LRRC9Q6ZRR7 1453 aa16.12■□□□□ 0.17
TUBA1C-209ENST00000552448 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
TUBA1C-209ENST00000552448 NUP160Q12769 1436 aa16.11■□□□□ 0.17
TUBA1C-209ENST00000552448 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
TUBA1C-209ENST00000552448 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
TUBA1C-209ENST00000552448 CCNB3Q8WWL7 1395 aa16.1■□□□□ 0.17
TUBA1C-209ENST00000552448 KIAA0556O60303 1618 aa16.05■□□□□ 0.16
TUBA1C-209ENST00000552448 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
TUBA1C-209ENST00000552448 CHD1O14646 1710 aa16.03■□□□□ 0.16
TUBA1C-209ENST00000552448 FBLN2P98095 1184 aa16.03■□□□□ 0.16
TUBA1C-209ENST00000552448 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
TUBA1C-209ENST00000552448 DISP1Q96F81 1524 aa16.02■□□□□ 0.15
TUBA1C-209ENST00000552448 PHLDB1Q86UU1 1377 aa16.01■□□□□ 0.15
TUBA1C-209ENST00000552448 MIER1Q8N108 512 aa16.01■□□□□ 0.15
TUBA1C-209ENST00000552448 HECW1Q76N89 1606 aa16.01■□□□□ 0.15
TUBA1C-209ENST00000552448 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
TUBA1C-209ENST00000552448 CCDC18Q5T9S5 1454 aa15.99■□□□□ 0.15
TUBA1C-209ENST00000552448 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
TUBA1C-209ENST00000552448 DHX57Q6P158 1386 aaKnown RBP15.98■□□□□ 0.15
TUBA1C-209ENST00000552448 LRRIQ1Q96JM4 1722 aa15.96■□□□□ 0.14
TUBA1C-209ENST00000552448 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
TUBA1C-209ENST00000552448 ITGAEP38570 1179 aa15.92■□□□□ 0.14
TUBA1C-209ENST00000552448 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
TUBA1C-209ENST00000552448 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
TUBA1C-209ENST00000552448 RAPGEF6Q8TEU7 1601 aa15.91■□□□□ 0.14
TUBA1C-209ENST00000552448 EHBP1L1Q8N3D4 1523 aa15.91■□□□□ 0.14
TUBA1C-209ENST00000552448 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
TUBA1C-209ENST00000552448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.9■□□□□ 0.143e-8■■■□□ 15.6
TUBA1C-209ENST00000552448 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
TUBA1C-209ENST00000552448 MTUS2Q5JR59 1369 aa15.88■□□□□ 0.13
TUBA1C-209ENST00000552448 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
TUBA1C-209ENST00000552448 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
TUBA1C-209ENST00000552448 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
TUBA1C-209ENST00000552448 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
TUBA1C-209ENST00000552448 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
TUBA1C-209ENST00000552448 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
TUBA1C-209ENST00000552448 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
TUBA1C-209ENST00000552448 TSHZ2Q9NRE2 1034 aa15.84■□□□□ 0.13
TUBA1C-209ENST00000552448 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
TUBA1C-209ENST00000552448 NCOA2Q15596 1464 aa15.83■□□□□ 0.12
TUBA1C-209ENST00000552448 MAGI3Q5TCQ9 1506 aa15.81■□□□□ 0.12
TUBA1C-209ENST00000552448 ABCA8O94911 1581 aa15.81■□□□□ 0.12
TUBA1C-209ENST00000552448 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
TUBA1C-209ENST00000552448 MYOM3Q5VTT5 1437 aa15.79■□□□□ 0.12
TUBA1C-209ENST00000552448 CDK11AQ9UQ88 783 aaPredicted RBP15.79■□□□□ 0.12
TUBA1C-209ENST00000552448 CDK13Q14004 1512 aaKnown RBP15.79■□□□□ 0.12
TUBA1C-209ENST00000552448 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
TUBA1C-209ENST00000552448 PLB1Q6P1J6 1458 aa15.78■□□□□ 0.12
TUBA1C-209ENST00000552448 PTPRGP23470 1445 aa15.76■□□□□ 0.11
TUBA1C-209ENST00000552448 PTPRKQ15262 1439 aa15.73■□□□□ 0.11
TUBA1C-209ENST00000552448 ADCY10Q96PN6 1610 aa15.72■□□□□ 0.11
TUBA1C-209ENST00000552448 PTPN23Q9H3S7 1636 aa15.72■□□□□ 0.11
TUBA1C-209ENST00000552448 TROQ12816 1431 aaPredicted RBP15.71■□□□□ 0.11
TUBA1C-209ENST00000552448 MIA2Q96PC5 1412 aa15.7■□□□□ 0.1
TUBA1C-209ENST00000552448 UACAQ9BZF9 1416 aa15.7■□□□□ 0.1
TUBA1C-209ENST00000552448 TCOF1Q13428 1488 aaKnown RBP15.7■□□□□ 0.1
TUBA1C-209ENST00000552448 HFM1A2PYH4 1435 aa15.69■□□□□ 0.1
TUBA1C-209ENST00000552448 ERCC6L2Q5T890 1561 aa15.67■□□□□ 0.1
TUBA1C-209ENST00000552448 ATP10BO94823 1461 aa15.67■□□□□ 0.1
TUBA1C-209ENST00000552448 ITSN2Q9NZM3 1697 aa15.67■□□□□ 0.1
TUBA1C-209ENST00000552448 ABCC2Q92887 1545 aa15.67■□□□□ 0.1
TUBA1C-209ENST00000552448 ARID3CA6NKF2 412 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms