RNA–Protein interactions for RNA: ENST00000552319.5

CNOT2-237, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-237ENST00000552319 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
CNOT2-237ENST00000552319 LOC105371045A0A1W2PR82 267 aa12.23□□□□□ -0.45
CNOT2-237ENST00000552319 CHD1O14646 1710 aa12.23□□□□□ -0.45
CNOT2-237ENST00000552319 GRIN2AQ12879 1464 aa12.22□□□□□ -0.45
CNOT2-237ENST00000552319 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.46
CNOT2-237ENST00000552319 NUP160Q12769 1436 aa12.2□□□□□ -0.46
CNOT2-237ENST00000552319 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
CNOT2-237ENST00000552319 EEA1Q15075 1411 aa12.18□□□□□ -0.46
CNOT2-237ENST00000552319 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
CNOT2-237ENST00000552319 CUL7Q14999 1698 aa12.14□□□□□ -0.47
CNOT2-237ENST00000552319 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
CNOT2-237ENST00000552319 ERCC6L2Q5T890 1561 aa12.11□□□□□ -0.47
CNOT2-237ENST00000552319 KIAA0586Q9BVV6 1533 aa12.11□□□□□ -0.47
CNOT2-237ENST00000552319 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
CNOT2-237ENST00000552319 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
CNOT2-237ENST00000552319 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
CNOT2-237ENST00000552319 KIF21BO75037 1637 aa12.06□□□□□ -0.48
CNOT2-237ENST00000552319 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
CNOT2-237ENST00000552319 DISP1Q96F81 1524 aa12.03□□□□□ -0.48
CNOT2-237ENST00000552319 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
CNOT2-237ENST00000552319 SHROOM2Q13796 1616 aa12.03□□□□□ -0.48
CNOT2-237ENST00000552319 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
CNOT2-237ENST00000552319 ARHGEF11O15085 1522 aa12.02□□□□□ -0.48
CNOT2-237ENST00000552319 RIMBP3CA6NJZ7 1639 aa12.01□□□□□ -0.49
CNOT2-237ENST00000552319 RIMBP3BA6NNM3 1639 aa12.01□□□□□ -0.49
CNOT2-237ENST00000552319 RIMBP3Q9UFD9 1639 aa12.01□□□□□ -0.49
CNOT2-237ENST00000552319 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
CNOT2-237ENST00000552319 TNIKQ9UKE5 1360 aa12□□□□□ -0.49
CNOT2-237ENST00000552319 UGGT2Q9NYU1 1516 aa11.99□□□□□ -0.49
CNOT2-237ENST00000552319 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
CNOT2-237ENST00000552319 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
CNOT2-237ENST00000552319 CTTNBP2Q8WZ74 1663 aa11.94□□□□□ -0.5
CNOT2-237ENST00000552319 ARHGAP35Q9NRY4 1499 aa11.94□□□□□ -0.5
CNOT2-237ENST00000552319 PTPRGP23470 1445 aa11.93□□□□□ -0.5
CNOT2-237ENST00000552319 FHOD3Q2V2M9 1422 aa11.92□□□□□ -0.5
CNOT2-237ENST00000552319 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
CNOT2-237ENST00000552319 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
CNOT2-237ENST00000552319 CARMIL2Q6F5E8 1435 aa11.89□□□□□ -0.51
CNOT2-237ENST00000552319 CLIP1P30622 1438 aa11.87□□□□□ -0.51
CNOT2-237ENST00000552319 PLB1Q6P1J6 1458 aa11.87□□□□□ -0.51
CNOT2-237ENST00000552319 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
CNOT2-237ENST00000552319 ARID3CA6NKF2 412 aa11.86□□□□□ -0.51
CNOT2-237ENST00000552319 UACAQ9BZF9 1416 aa11.83□□□□□ -0.52
CNOT2-237ENST00000552319 ADCY10Q96PN6 1610 aa11.81□□□□□ -0.52
CNOT2-237ENST00000552319 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
CNOT2-237ENST00000552319 ABCA8O94911 1581 aa11.8□□□□□ -0.52
CNOT2-237ENST00000552319 ATP10BO94823 1461 aa11.79□□□□□ -0.52
CNOT2-237ENST00000552319 EFCAB5A4FU69 1503 aa11.79□□□□□ -0.52
CNOT2-237ENST00000552319 UHRF1BP1LA0JNW5 1464 aa11.78□□□□□ -0.52
CNOT2-237ENST00000552319 NUP153P49790 1475 aaKnown RBP11.77□□□□□ -0.52
CNOT2-237ENST00000552319 ATP1B4Q9UN42 357 aaPredicted RBP11.77□□□□□ -0.53
CNOT2-237ENST00000552319 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
CNOT2-237ENST00000552319 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
CNOT2-237ENST00000552319 ABCC2Q92887 1545 aa11.75□□□□□ -0.53
CNOT2-237ENST00000552319 FMN1Q68DA7 1419 aa11.72□□□□□ -0.53
CNOT2-237ENST00000552319 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
CNOT2-237ENST00000552319 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
CNOT2-237ENST00000552319 LRRIQ1Q96JM4 1722 aa11.72□□□□□ -0.53
CNOT2-237ENST00000552319 RAPGEF6Q8TEU7 1601 aa11.71□□□□□ -0.53
CNOT2-237ENST00000552319 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.53
CNOT2-237ENST00000552319 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
CNOT2-237ENST00000552319 KCNH8Q96L42 1107 aa11.71□□□□□ -0.53
CNOT2-237ENST00000552319 ASXL2Q76L83 1435 aa11.69□□□□□ -0.54
CNOT2-237ENST00000552319 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
CNOT2-237ENST00000552319 EPRSP07814 1512 aaKnown RBP11.69□□□□□ -0.54
CNOT2-237ENST00000552319 VPS8Q8N3P4 1428 aa11.69□□□□□ -0.54
CNOT2-237ENST00000552319 ZCCHC11Q5TAX3 1644 aaKnown RBP11.68□□□□□ -0.54
CNOT2-237ENST00000552319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
CNOT2-237ENST00000552319 HNRNPUL2Q1KMD3 747 aaKnown RBP11.68□□□□□ -0.54
CNOT2-237ENST00000552319 PCF11O94913 1555 aaKnown RBP11.67□□□□□ -0.54
CNOT2-237ENST00000552319 MAGI3Q5TCQ9 1506 aa11.67□□□□□ -0.54
CNOT2-237ENST00000552319 PPARGC1BQ86YN6 1023 aaKnown RBP11.67□□□□□ -0.54
CNOT2-237ENST00000552319 FAM69CQ0P6D2 419 aa11.66□□□□□ -0.54
CNOT2-237ENST00000552319 PLEKHD1A6NEE1 506 aa11.65□□□□□ -0.54
CNOT2-237ENST00000552319 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
CNOT2-237ENST00000552319 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
CNOT2-237ENST00000552319 MAPKBP1O60336 1514 aa11.63□□□□□ -0.55
CNOT2-237ENST00000552319 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
CNOT2-237ENST00000552319 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
CNOT2-237ENST00000552319 WDR7Q9Y4E6 1490 aa11.6□□□□□ -0.55
CNOT2-237ENST00000552319 HECW1Q76N89 1606 aa11.59□□□□□ -0.55
CNOT2-237ENST00000552319 KIF13AQ9H1H9 1805 aa11.58□□□□□ -0.56
CNOT2-237ENST00000552319 TROQ12816 1431 aaPredicted RBP11.57□□□□□ -0.56
CNOT2-237ENST00000552319 DIP2BQ9P265 1576 aa11.57□□□□□ -0.56
CNOT2-237ENST00000552319 TIAM1Q13009 1591 aa11.55□□□□□ -0.56
CNOT2-237ENST00000552319 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
CNOT2-237ENST00000552319 KIF14Q15058 1648 aa11.55□□□□□ -0.56
CNOT2-237ENST00000552319 CCDC18Q5T9S5 1454 aa11.55□□□□□ -0.56
CNOT2-237ENST00000552319 LRRC9Q6ZRR7 1453 aa11.55□□□□□ -0.56
CNOT2-237ENST00000552319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.563e-8■■■□□ 17.7
CNOT2-237ENST00000552319 GLI2P10070 1586 aa11.54□□□□□ -0.56
CNOT2-237ENST00000552319 CD109Q6YHK3 1445 aa11.53□□□□□ -0.56
CNOT2-237ENST00000552319 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
CNOT2-237ENST00000552319 MAP3K1Q13233 1512 aa11.53□□□□□ -0.56
CNOT2-237ENST00000552319 ZNF644Q9H582 1327 aaPredicted RBP11.53□□□□□ -0.56
CNOT2-237ENST00000552319 MTUS2Q5JR59 1369 aa11.52□□□□□ -0.57
CNOT2-237ENST00000552319 PPRC1Q5VV67 1664 aaKnown RBP11.51□□□□□ -0.57
CNOT2-237ENST00000552319 GPATCH8Q9UKJ3 1502 aaKnown RBP11.5□□□□□ -0.57
CNOT2-237ENST00000552319 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
CNOT2-237ENST00000552319 PHLDB1Q86UU1 1377 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms