RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SHROOM2Q13796 1616 aa30.97■■■□□ 2.55
PRPF40B-216ENST00000552301 KIAA0586Q9BVV6 1533 aa30.94■■■□□ 2.54
PRPF40B-216ENST00000552301 EEA1Q15075 1411 aa30.91■■■□□ 2.54
PRPF40B-216ENST00000552301 JPH4Q96JJ6 628 aa30.91■■■□□ 2.54
PRPF40B-216ENST00000552301 PRG4Q92954 1404 aaPredicted RBP30.87■■■□□ 2.53
PRPF40B-216ENST00000552301 ERCC6L2Q5T890 1561 aa30.87■■■□□ 2.53
PRPF40B-216ENST00000552301 PRXQ9BXM0 1461 aa30.83■■■□□ 2.53
PRPF40B-216ENST00000552301 CSRNP3Q8WYN3 585 aa30.83■■■□□ 2.53
PRPF40B-216ENST00000552301 IQGAP2Q13576 1575 aa30.8■■■□□ 2.52
PRPF40B-216ENST00000552301 FAM9AQ8IZU1 332 aaPredicted RBP30.77■■■□□ 2.52
PRPF40B-216ENST00000552301 CTTNBP2Q8WZ74 1663 aa30.7■■■□□ 2.5
PRPF40B-216ENST00000552301 CARMIL2Q6F5E8 1435 aa30.67■■■□□ 2.5
PRPF40B-216ENST00000552301 UGGT2Q9NYU1 1516 aa30.6■■■□□ 2.49
PRPF40B-216ENST00000552301 KIF21BO75037 1637 aa30.57■■■□□ 2.48
PRPF40B-216ENST00000552301 TNIKQ9UKE5 1360 aa30.54■■■□□ 2.48
PRPF40B-216ENST00000552301 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
PRPF40B-216ENST00000552301 PTPRGP23470 1445 aa30.52■■■□□ 2.48
PRPF40B-216ENST00000552301 TTBK1Q5TCY1 1321 aaPredicted RBP30.51■■■□□ 2.48
PRPF40B-216ENST00000552301 KIAA0556O60303 1618 aa30.5■■■□□ 2.47
PRPF40B-216ENST00000552301 GOLGA3Q08378 1498 aa30.49■■■□□ 2.47
PRPF40B-216ENST00000552301 TRHP20396 242 aaPredicted RBP30.41■■■□□ 2.46
PRPF40B-216ENST00000552301 EHMT2Q96KQ7 1210 aa30.39■■■□□ 2.46
PRPF40B-216ENST00000552301 NPM1P06748 294 aaKnown RBP eCLIP30.38■■■□□ 2.45
PRPF40B-216ENST00000552301 ADCY10Q96PN6 1610 aa30.37■■■□□ 2.45
PRPF40B-216ENST00000552301 UBTFP17480 764 aaKnown RBP30.35■■■□□ 2.45
PRPF40B-216ENST00000552301 UACAQ9BZF9 1416 aa30.3■■■□□ 2.44
PRPF40B-216ENST00000552301 RANGAP1P46060 587 aaPredicted RBP30.3■■■□□ 2.44
PRPF40B-216ENST00000552301 SAMD9Q5K651 1589 aa30.27■■■□□ 2.44
PRPF40B-216ENST00000552301 P3H3Q8IVL6 736 aa30.26■■■□□ 2.43
PRPF40B-216ENST00000552301 ABCC2Q92887 1545 aa30.26■■■□□ 2.43
PRPF40B-216ENST00000552301 UHRF1BP1LA0JNW5 1464 aa30.25■■■□□ 2.43
PRPF40B-216ENST00000552301 MAPKBP1O60336 1514 aa30.2■■■□□ 2.42
PRPF40B-216ENST00000552301 EFCAB5A4FU69 1503 aa30.19■■■□□ 2.42
PRPF40B-216ENST00000552301 PLB1Q6P1J6 1458 aa30.18■■■□□ 2.42
PRPF40B-216ENST00000552301 ABCA8O94911 1581 aa30.14■■■□□ 2.42
PRPF40B-216ENST00000552301 FHOD3Q2V2M9 1422 aa30.13■■■□□ 2.41
PRPF40B-216ENST00000552301 KDM5BQ9UGL1 1544 aa30.11■■■□□ 2.41
PRPF40B-216ENST00000552301 ZCCHC11Q5TAX3 1644 aaKnown RBP30.07■■■□□ 2.4
PRPF40B-216ENST00000552301 ABCC10Q5T3U5 1492 aa30.06■■■□□ 2.4
PRPF40B-216ENST00000552301 ASXL2Q76L83 1435 aa30.05■■■□□ 2.4
PRPF40B-216ENST00000552301 KIF13AQ9H1H9 1805 aa30.03■■■□□ 2.4
PRPF40B-216ENST00000552301 FAM69CQ0P6D2 419 aa30.02■■■□□ 2.4
PRPF40B-216ENST00000552301 DIP2BQ9P265 1576 aa30.02■■■□□ 2.4
PRPF40B-216ENST00000552301 RAPGEF6Q8TEU7 1601 aa30.01■■■□□ 2.39
PRPF40B-216ENST00000552301 ARHGAP35Q9NRY4 1499 aa29.99■■■□□ 2.39
PRPF40B-216ENST00000552301 ARID3CA6NKF2 412 aa29.94■■■□□ 2.38
PRPF40B-216ENST00000552301 FMN1Q68DA7 1419 aa29.92■■■□□ 2.38
PRPF40B-216ENST00000552301 WDR7Q9Y4E6 1490 aa29.91■■■□□ 2.38
PRPF40B-216ENST00000552301 ATP10BO94823 1461 aa29.87■■■□□ 2.37
PRPF40B-216ENST00000552301 NUP153P49790 1475 aaKnown RBP29.87■■■□□ 2.37
PRPF40B-216ENST00000552301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.87■■■□□ 2.37
PRPF40B-216ENST00000552301 HNRNPUL2Q1KMD3 747 aaKnown RBP29.87■■■□□ 2.37
PRPF40B-216ENST00000552301 CLIP1P30622 1438 aa29.87■■■□□ 2.37
PRPF40B-216ENST00000552301 EPRSP07814 1512 aaKnown RBP29.86■■■□□ 2.37
PRPF40B-216ENST00000552301 GLI2P10070 1586 aa29.84■■■□□ 2.37
PRPF40B-216ENST00000552301 TSPOAP1O95153 1857 aa29.79■■■□□ 2.36
PRPF40B-216ENST00000552301 ATP1B4Q9UN42 357 aaPredicted RBP29.79■■■□□ 2.36
PRPF40B-216ENST00000552301 HECW1Q76N89 1606 aa29.78■■■□□ 2.36
PRPF40B-216ENST00000552301 KCNH8Q96L42 1107 aa29.77■■■□□ 2.36
PRPF40B-216ENST00000552301 CEP162Q5TB80 1403 aa29.72■■■□□ 2.35
PRPF40B-216ENST00000552301 LOC105371045A0A1W2PR82 267 aa29.71■■■□□ 2.35
PRPF40B-216ENST00000552301 MAP3K4Q9Y6R4 1608 aa29.71■■■□□ 2.35
PRPF40B-216ENST00000552301 CDK13Q14004 1512 aaKnown RBP29.69■■■□□ 2.34
PRPF40B-216ENST00000552301 PLEKHD1A6NEE1 506 aa29.68■■■□□ 2.34
PRPF40B-216ENST00000552301 PCF11O94913 1555 aaKnown RBP29.66■■■□□ 2.34
PRPF40B-216ENST00000552301 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
PRPF40B-216ENST00000552301 CASKIN1Q8WXD9 1431 aa29.65■■■□□ 2.34
PRPF40B-216ENST00000552301 TEX14Q8IWB6 1497 aa29.64■■■□□ 2.34
PRPF40B-216ENST00000552301 PPRC1Q5VV67 1664 aaKnown RBP29.63■■■□□ 2.33
PRPF40B-216ENST00000552301 CD109Q6YHK3 1445 aa29.62■■■□□ 2.33
PRPF40B-216ENST00000552301 FYCO1Q9BQS8 1478 aa29.61■■■□□ 2.33
PRPF40B-216ENST00000552301 CDK11AQ9UQ88 783 aaPredicted RBP29.6■■■□□ 2.33
PRPF40B-216ENST00000552301 KDM6BO15054 1643 aa29.58■■■□□ 2.33
PRPF40B-216ENST00000552301 CCDC18Q5T9S5 1454 aa29.58■■■□□ 2.33
PRPF40B-216ENST00000552301 ABCA9Q8IUA7 1624 aa29.57■■■□□ 2.32
PRPF40B-216ENST00000552301 MAGI3Q5TCQ9 1506 aa29.55■■■□□ 2.32
PRPF40B-216ENST00000552301 LRRIQ1Q96JM4 1722 aa29.52■■■□□ 2.32
PRPF40B-216ENST00000552301 TROQ12816 1431 aaPredicted RBP29.46■■■□□ 2.31
PRPF40B-216ENST00000552301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.44■■■□□ 2.3
PRPF40B-216ENST00000552301 KIF14Q15058 1648 aa29.43■■■□□ 2.3
PRPF40B-216ENST00000552301 TTC37Q6PGP7 1564 aa29.42■■■□□ 2.3
PRPF40B-216ENST00000552301 VPS8Q8N3P4 1428 aa29.37■■■□□ 2.29
PRPF40B-216ENST00000552301 NEO1Q92859 1461 aa29.36■■■□□ 2.29
PRPF40B-216ENST00000552301 PHLDB1Q86UU1 1377 aa29.35■■■□□ 2.29
PRPF40B-216ENST00000552301 COL17A1Q9UMD9 1497 aaPredicted RBP29.34■■■□□ 2.29
PRPF40B-216ENST00000552301 CFAP74Q9C0B2 1584 aa29.32■■■□□ 2.28
PRPF40B-216ENST00000552301 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
PRPF40B-216ENST00000552301 MYO5CQ9NQX4 1742 aa29.3■■■□□ 2.28
PRPF40B-216ENST00000552301 FANCAO15360 1455 aa29.29■■■□□ 2.28
PRPF40B-216ENST00000552301 MTUS2Q5JR59 1369 aa29.28■■■□□ 2.28
PRPF40B-216ENST00000552301 ARAP3Q8WWN8 1544 aa29.28■■■□□ 2.28
PRPF40B-216ENST00000552301 PLCH2O75038 1416 aa29.27■■■□□ 2.28
PRPF40B-216ENST00000552301 AKNAQ7Z591 1439 aa29.22■■■□□ 2.27
PRPF40B-216ENST00000552301 EHBP1L1Q8N3D4 1523 aa29.21■■■□□ 2.27
PRPF40B-216ENST00000552301 ARHGAP5Q13017 1502 aa29.2■■■□□ 2.27
PRPF40B-216ENST00000552301 EFCAB2Q5VUJ9 269 aa29.2■■■□□ 2.26
PRPF40B-216ENST00000552301 TIAM1Q13009 1591 aa29.18■■■□□ 2.26
PRPF40B-216ENST00000552301 DENND4BO75064 1496 aaPredicted RBP29.17■■■□□ 2.26
PRPF40B-216ENST00000552301 ADGRL1O94910 1474 aa29.16■■■□□ 2.26
PRPF40B-216ENST00000552301 PREX2Q70Z35 1606 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms