RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 CHMP7Q8WUX9 453 aaPredicted RBP10.14□□□□□ -0.79
CCDC65-204ENST00000552188 MAGI1Q96QZ7 1491 aaPredicted RBP10.13□□□□□ -0.79
CCDC65-204ENST00000552188 SYNJ2O15056 1496 aa10.1□□□□□ -0.79
CCDC65-204ENST00000552188 TRIM41Q8WV44 630 aa10.09□□□□□ -0.79
CCDC65-204ENST00000552188 RIMBP3CA6NJZ7 1639 aa10.08□□□□□ -0.8
CCDC65-204ENST00000552188 RIMBP3BA6NNM3 1639 aa10.08□□□□□ -0.8
CCDC65-204ENST00000552188 RIMBP3Q9UFD9 1639 aa10.08□□□□□ -0.8
CCDC65-204ENST00000552188 ERICH3Q5RHP9 1530 aa10.06□□□□□ -0.8
CCDC65-204ENST00000552188 ADAMTS12P58397 1594 aa10.05□□□□□ -0.8
CCDC65-204ENST00000552188 ARHGEF11O15085 1522 aa10.04□□□□□ -0.8
CCDC65-204ENST00000552188 KIF27Q86VH2 1401 aa10.03□□□□□ -0.8
CCDC65-204ENST00000552188 FHAD1B1AJZ9 1412 aa10.02□□□□□ -0.81
CCDC65-204ENST00000552188 GRIN2AQ12879 1464 aa10.02□□□□□ -0.81
CCDC65-204ENST00000552188 CUL7Q14999 1698 aa10.02□□□□□ -0.81
CCDC65-204ENST00000552188 CLASP1Q7Z460 1538 aa10.02□□□□□ -0.81
CCDC65-204ENST00000552188 ZBTB22O15209 634 aa10.01□□□□□ -0.81
CCDC65-204ENST00000552188 CSRNP3Q8WYN3 585 aa10□□□□□ -0.81
CCDC65-204ENST00000552188 CEP170Q5SW79 1584 aa9.98□□□□□ -0.81
CCDC65-204ENST00000552188 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
CCDC65-204ENST00000552188 CYB5RLQ6IPT4 315 aa9.98□□□□□ -0.81
CCDC65-204ENST00000552188 NUP160Q12769 1436 aa9.94□□□□□ -0.82
CCDC65-204ENST00000552188 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
CCDC65-204ENST00000552188 ARAP1Q96P48 1450 aa9.93□□□□□ -0.82
CCDC65-204ENST00000552188 IGF1RP08069 1367 aa9.93□□□□□ -0.82
CCDC65-204ENST00000552188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC65-204ENST00000552188 CARMIL1Q5VZK9 1371 aa9.92□□□□□ -0.82
CCDC65-204ENST00000552188 SHROOM2Q13796 1616 aa9.91□□□□□ -0.82
CCDC65-204ENST00000552188 RUSC2Q8N2Y8 1516 aa9.91□□□□□ -0.82
CCDC65-204ENST00000552188 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
CCDC65-204ENST00000552188 PRG4Q92954 1404 aaPredicted RBP9.88□□□□□ -0.83
CCDC65-204ENST00000552188 ERCC6L2Q5T890 1561 aa9.88□□□□□ -0.83
CCDC65-204ENST00000552188 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
CCDC65-204ENST00000552188 KIAA0586Q9BVV6 1533 aa9.87□□□□□ -0.83
CCDC65-204ENST00000552188 RAPGEF2Q9Y4G8 1499 aa9.86□□□□□ -0.83
CCDC65-204ENST00000552188 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
CCDC65-204ENST00000552188 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
CCDC65-204ENST00000552188 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
CCDC65-204ENST00000552188 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
CCDC65-204ENST00000552188 FAM9AQ8IZU1 332 aaPredicted RBP9.81□□□□□ -0.84
CCDC65-204ENST00000552188 EEA1Q15075 1411 aa9.81□□□□□ -0.84
CCDC65-204ENST00000552188 NPM1P06748 294 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC65-204ENST00000552188 PTPRGP23470 1445 aa9.76□□□□□ -0.85
CCDC65-204ENST00000552188 MYCNP04198 464 aaPredicted RBP9.76□□□□□ -0.85
CCDC65-204ENST00000552188 U3KPZ7 1027 aaPredicted RBP9.76□□□□□ -0.85
CCDC65-204ENST00000552188 PRXQ9BXM0 1461 aa9.76□□□□□ -0.85
CCDC65-204ENST00000552188 TNIKQ9UKE5 1360 aa9.75□□□□□ -0.85
CCDC65-204ENST00000552188 UGGT2Q9NYU1 1516 aa9.75□□□□□ -0.85
CCDC65-204ENST00000552188 GOLGA3Q08378 1498 aa9.74□□□□□ -0.85
CCDC65-204ENST00000552188 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
CCDC65-204ENST00000552188 ADCY10Q96PN6 1610 aa9.73□□□□□ -0.85
CCDC65-204ENST00000552188 KIF21BO75037 1637 aa9.72□□□□□ -0.85
CCDC65-204ENST00000552188 DISP1Q96F81 1524 aa9.72□□□□□ -0.85
CCDC65-204ENST00000552188 KIF13AQ9H1H9 1805 aa9.71□□□□□ -0.85
CCDC65-204ENST00000552188 RANGAP1P46060 587 aaPredicted RBP9.71□□□□□ -0.86
CCDC65-204ENST00000552188 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
CCDC65-204ENST00000552188 TSPOAP1O95153 1857 aa9.68□□□□□ -0.86
CCDC65-204ENST00000552188 UACAQ9BZF9 1416 aa9.68□□□□□ -0.86
CCDC65-204ENST00000552188 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
CCDC65-204ENST00000552188 MAPKBP1O60336 1514 aa9.66□□□□□ -0.86
CCDC65-204ENST00000552188 ABCC2Q92887 1545 aa9.66□□□□□ -0.86
CCDC65-204ENST00000552188 RNF39Q9H2S5 420 aa9.66□□□□□ -0.86
CCDC65-204ENST00000552188 ZCCHC11Q5TAX3 1644 aaKnown RBP9.66□□□□□ -0.86
CCDC65-204ENST00000552188 UHRF1BP1LA0JNW5 1464 aa9.65□□□□□ -0.87
CCDC65-204ENST00000552188 SAMD9Q5K651 1589 aa9.64□□□□□ -0.87
CCDC65-204ENST00000552188 FAM69CQ0P6D2 419 aa9.64□□□□□ -0.87
CCDC65-204ENST00000552188 DIP2BQ9P265 1576 aa9.63□□□□□ -0.87
CCDC65-204ENST00000552188 ABCC10Q5T3U5 1492 aa9.62□□□□□ -0.87
CCDC65-204ENST00000552188 PLB1Q6P1J6 1458 aa9.62□□□□□ -0.87
CCDC65-204ENST00000552188 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
CCDC65-204ENST00000552188 RAPGEF6Q8TEU7 1601 aa9.61□□□□□ -0.87
CCDC65-204ENST00000552188 ASXL2Q76L83 1435 aa9.61□□□□□ -0.87
CCDC65-204ENST00000552188 ABCA8O94911 1581 aa9.61□□□□□ -0.87
CCDC65-204ENST00000552188 KDM5BQ9UGL1 1544 aa9.61□□□□□ -0.87
CCDC65-204ENST00000552188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.6□□□□□ -0.87
CCDC65-204ENST00000552188 HNRNPUL2Q1KMD3 747 aaKnown RBP9.6□□□□□ -0.87
CCDC65-204ENST00000552188 ARID3CA6NKF2 412 aa9.59□□□□□ -0.87
CCDC65-204ENST00000552188 SAMD1Q6SPF0 538 aaPredicted RBP9.59□□□□□ -0.87
CCDC65-204ENST00000552188 FHOD3Q2V2M9 1422 aa9.58□□□□□ -0.88
CCDC65-204ENST00000552188 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
CCDC65-204ENST00000552188 GLI2P10070 1586 aa9.56□□□□□ -0.88
CCDC65-204ENST00000552188 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
CCDC65-204ENST00000552188 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
CCDC65-204ENST00000552188 CFAP43Q8NDM7 1665 aa9.55□□□□□ -0.88
CCDC65-204ENST00000552188 WDR7Q9Y4E6 1490 aa9.55□□□□□ -0.88
CCDC65-204ENST00000552188 KDM6BO15054 1643 aa9.55□□□□□ -0.88
CCDC65-204ENST00000552188 MAP3K4Q9Y6R4 1608 aa9.54□□□□□ -0.88
CCDC65-204ENST00000552188 EPRSP07814 1512 aaKnown RBP9.54□□□□□ -0.88
CCDC65-204ENST00000552188 ATXN8OSP0DMR3 200 aa9.53□□□□□ -0.88
CCDC65-204ENST00000552188 C1QBPQ07021 282 aaKnown RBP9.53□□□□□ -0.88
CCDC65-204ENST00000552188 ATP10BO94823 1461 aa9.53□□□□□ -0.88
CCDC65-204ENST00000552188 FMN1Q68DA7 1419 aa9.52□□□□□ -0.89
CCDC65-204ENST00000552188 HECW1Q76N89 1606 aa9.52□□□□□ -0.89
CCDC65-204ENST00000552188 TEX14Q8IWB6 1497 aa9.52□□□□□ -0.89
CCDC65-204ENST00000552188 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
CCDC65-204ENST00000552188 PPRC1Q5VV67 1664 aaKnown RBP9.51□□□□□ -0.89
CCDC65-204ENST00000552188 PLEKHD1A6NEE1 506 aa9.51□□□□□ -0.89
CCDC65-204ENST00000552188 SPINK5Q9NQ38 1064 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-204ENST00000552188 NUP153P49790 1475 aaKnown RBP9.5□□□□□ -0.89
CCDC65-204ENST00000552188 CD109Q6YHK3 1445 aa9.49□□□□□ -0.89
CCDC65-204ENST00000552188 CLIP1P30622 1438 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms