RNA–Protein interactions for RNA: ENST00000551457.1

TMCC3-203, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 1 (best) BASIC

Gene TMCC3, Length 4,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-203ENST00000551457 CARMIL1Q5VZK9 1371 aa11.14□□□□□ -0.63
TMCC3-203ENST00000551457 RRP7BPQ9NSQ0 103 aa11.14□□□□□ -0.63
TMCC3-203ENST00000551457 CCER2I3L3R5 266 aa11.13□□□□□ -0.63
TMCC3-203ENST00000551457 TSPY4P0CV99 314 aa11.13□□□□□ -0.63
TMCC3-203ENST00000551457 TSPY10P0CW01 314 aa11.13□□□□□ -0.63
TMCC3-203ENST00000551457 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
TMCC3-203ENST00000551457 SETD5Q9C0A6 1442 aa11.12□□□□□ -0.63
TMCC3-203ENST00000551457 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
TMCC3-203ENST00000551457 ANP32EQ9BTT0 268 aa11.11□□□□□ -0.63
TMCC3-203ENST00000551457 CUX2O14529 1486 aa11.1□□□□□ -0.63
TMCC3-203ENST00000551457 KANK4Q5T7N3 995 aaPredicted RBP11.1□□□□□ -0.63
TMCC3-203ENST00000551457 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
TMCC3-203ENST00000551457 NPM2Q86SE8 214 aaKnown RBP11.08□□□□□ -0.64
TMCC3-203ENST00000551457 SMARCA4P51532 1647 aa11.08□□□□□ -0.64
TMCC3-203ENST00000551457 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.06□□□□□ -0.64
TMCC3-203ENST00000551457 IRX6P78412 446 aaPredicted RBP11.06□□□□□ -0.64
TMCC3-203ENST00000551457 RAB3GAP2Q9H2M9 1393 aa11.05□□□□□ -0.64
TMCC3-203ENST00000551457 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
TMCC3-203ENST00000551457 NEFMP07197 916 aa11.04□□□□□ -0.64
TMCC3-203ENST00000551457 ARHGAP35Q9NRY4 1499 aa11.04□□□□□ -0.64
TMCC3-203ENST00000551457 RAPGEF2Q9Y4G8 1499 aa11.04□□□□□ -0.64
TMCC3-203ENST00000551457 KDM2AQ9Y2K7 1162 aa11.02□□□□□ -0.65
TMCC3-203ENST00000551457 CHMP7Q8WUX9 453 aaPredicted RBP11.02□□□□□ -0.65
TMCC3-203ENST00000551457 RUSC2Q8N2Y8 1516 aa11.02□□□□□ -0.65
TMCC3-203ENST00000551457 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
TMCC3-203ENST00000551457 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
TMCC3-203ENST00000551457 PLEKHD1A6NEE1 506 aa11.01□□□□□ -0.65
TMCC3-203ENST00000551457 ATAD2BQ9ULI0 1458 aa11.01□□□□□ -0.65
TMCC3-203ENST00000551457 CFDP1Q9UEE9 299 aaPredicted RBP11.01□□□□□ -0.65
TMCC3-203ENST00000551457 WDR43Q15061 677 aaKnown RBP eCLIP11□□□□□ -0.65
TMCC3-203ENST00000551457 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
TMCC3-203ENST00000551457 PPP1R15AO75807 674 aaPredicted RBP11□□□□□ -0.65
TMCC3-203ENST00000551457 UPF2Q9HAU5 1272 aaKnown RBP10.99□□□□□ -0.65
TMCC3-203ENST00000551457 FMN1Q68DA7 1419 aa10.99□□□□□ -0.65
TMCC3-203ENST00000551457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.65
TMCC3-203ENST00000551457 NBR1Q14596 966 aa10.96□□□□□ -0.65
TMCC3-203ENST00000551457 CARD11Q9BXL7 1154 aa10.95□□□□□ -0.66
TMCC3-203ENST00000551457 DDRGK1Q96HY6 314 aa10.95□□□□□ -0.66
TMCC3-203ENST00000551457 CDCA8Q53HL2 280 aa10.93□□□□□ -0.66
TMCC3-203ENST00000551457 HSPA5P11021 654 aaKnown RBP10.93□□□□□ -0.66
TMCC3-203ENST00000551457 RBM19Q9Y4C8 960 aaKnown RBP10.92□□□□□ -0.66
TMCC3-203ENST00000551457 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
TMCC3-203ENST00000551457 TSHZ2Q9NRE2 1034 aa10.91□□□□□ -0.66
TMCC3-203ENST00000551457 CHGAP10645 457 aaKnown RBP10.9□□□□□ -0.66
TMCC3-203ENST00000551457 PPM1GO15355 546 aaPredicted RBP10.88□□□□□ -0.67
TMCC3-203ENST00000551457 KIF21BO75037 1637 aa10.88□□□□□ -0.67
TMCC3-203ENST00000551457 MPHOSPH9Q99550 1183 aa10.88□□□□□ -0.67
TMCC3-203ENST00000551457 RGL3Q3MIN7 710 aa10.87□□□□□ -0.67
TMCC3-203ENST00000551457 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
TMCC3-203ENST00000551457 NOP58Q9Y2X3 529 aaKnown RBP10.87□□□□□ -0.67
TMCC3-203ENST00000551457 KNSTRNQ9Y448 316 aa10.87□□□□□ -0.67
TMCC3-203ENST00000551457 NPM1P06748 294 aaKnown RBP eCLIP10.86□□□□□ -0.67
TMCC3-203ENST00000551457 EIF4G1Q04637 1599 aaKnown RBP10.85□□□□□ -0.67
TMCC3-203ENST00000551457 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
TMCC3-203ENST00000551457 FHOD3Q2V2M9 1422 aa10.85□□□□□ -0.67
TMCC3-203ENST00000551457 HSP90AA1P07900 732 aaKnown RBP10.84□□□□□ -0.67
TMCC3-203ENST00000551457 ANP32BQ92688 251 aaKnown RBP10.84□□□□□ -0.67
TMCC3-203ENST00000551457 BECN1Q14457 450 aa10.84□□□□□ -0.67
TMCC3-203ENST00000551457 PDS5BQ9NTI5 1447 aa10.84□□□□□ -0.67
TMCC3-203ENST00000551457 ERICH3Q5RHP9 1530 aa10.82□□□□□ -0.68
TMCC3-203ENST00000551457 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
TMCC3-203ENST00000551457 L3MBTL2Q969R5 705 aa10.81□□□□□ -0.68
TMCC3-203ENST00000551457 IGF1RP08069 1367 aa10.81□□□□□ -0.68
TMCC3-203ENST00000551457 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
TMCC3-203ENST00000551457 TMF1P82094 1093 aa10.81□□□□□ -0.68
TMCC3-203ENST00000551457 PKD2Q13563 968 aa10.81□□□□□ -0.68
TMCC3-203ENST00000551457 RALBP1Q15311 655 aa10.8□□□□□ -0.68
TMCC3-203ENST00000551457 CFAP53Q96M91 514 aa10.8□□□□□ -0.68
TMCC3-203ENST00000551457 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
TMCC3-203ENST00000551457 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
TMCC3-203ENST00000551457 KCNH8Q96L42 1107 aa10.79□□□□□ -0.68
TMCC3-203ENST00000551457 EIF5BO60841 1220 aaKnown RBP10.79□□□□□ -0.68
TMCC3-203ENST00000551457 ANKRD30AQ9BXX3 1397 aa10.78□□□□□ -0.68
TMCC3-203ENST00000551457 ROCK2O75116 1388 aaKnown RBP10.78□□□□□ -0.68
TMCC3-203ENST00000551457 FOXD1Q16676 465 aa10.77□□□□□ -0.69
TMCC3-203ENST00000551457 BCL11AQ9H165 835 aa10.77□□□□□ -0.69
TMCC3-203ENST00000551457 NCAPD3P42695 1498 aa10.77□□□□□ -0.69
TMCC3-203ENST00000551457 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.69
TMCC3-203ENST00000551457 NUDCQ9Y266 331 aa10.77□□□□□ -0.69
TMCC3-203ENST00000551457 KTN1Q86UP2 1357 aaKnown RBP10.77□□□□□ -0.69
TMCC3-203ENST00000551457 CARMIL2Q6F5E8 1435 aa10.76□□□□□ -0.69
TMCC3-203ENST00000551457 SENP3-EIF4A1A0A087X0R7 540 aa10.76□□□□□ -0.69
TMCC3-203ENST00000551457 TCERG1O14776 1098 aaKnown RBP10.75□□□□□ -0.69
TMCC3-203ENST00000551457 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
TMCC3-203ENST00000551457 LRRC9Q6ZRR7 1453 aa10.75□□□□□ -0.69
TMCC3-203ENST00000551457 PRXQ9BXM0 1461 aa10.75□□□□□ -0.69
TMCC3-203ENST00000551457 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
TMCC3-203ENST00000551457 CC2D1BQ5T0F9 858 aaKnown RBP10.74□□□□□ -0.69
TMCC3-203ENST00000551457 PDE3BQ13370 1112 aa10.74□□□□□ -0.69
TMCC3-203ENST00000551457 NUP155O75694 1391 aa10.74□□□□□ -0.69
TMCC3-203ENST00000551457 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
TMCC3-203ENST00000551457 FANCD2Q9BXW9 1451 aa10.73□□□□□ -0.69
TMCC3-203ENST00000551457 PRKRIP1Q9H875 184 aaPredicted RBP10.73□□□□□ -0.69
TMCC3-203ENST00000551457 ARAP1Q96P48 1450 aa10.73□□□□□ -0.69
TMCC3-203ENST00000551457 MYH16Q9H6N6 1097 aa10.73□□□□□ -0.69
TMCC3-203ENST00000551457 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
TMCC3-203ENST00000551457 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
TMCC3-203ENST00000551457 PHLDB1Q86UU1 1377 aa10.73□□□□□ -0.69
TMCC3-203ENST00000551457 MS4A1P11836 297 aa10.72□□□□□ -0.69
TMCC3-203ENST00000551457 ZBED9Q6R2W3 1325 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms