RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
RAB5C-208ENST00000551338 PCF11O94913 1555 aaKnown RBP17.74■□□□□ 0.43
RAB5C-208ENST00000551338 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
RAB5C-208ENST00000551338 EIF4G3O43432 1585 aaKnown RBP17.73■□□□□ 0.43
RAB5C-208ENST00000551338 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
RAB5C-208ENST00000551338 APLP2Q06481 763 aa17.72■□□□□ 0.43
RAB5C-208ENST00000551338 AQRO60306 1485 aaKnown RBP eCLIP17.7■□□□□ 0.42
RAB5C-208ENST00000551338 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
RAB5C-208ENST00000551338 MAP3K1Q13233 1512 aa17.7■□□□□ 0.42
RAB5C-208ENST00000551338 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
RAB5C-208ENST00000551338 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
RAB5C-208ENST00000551338 FHOD3Q2V2M9 1422 aa17.66■□□□□ 0.42
RAB5C-208ENST00000551338 LRRIQ1Q96JM4 1722 aa17.64■□□□□ 0.41
RAB5C-208ENST00000551338 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
RAB5C-208ENST00000551338 IQGAP2Q13576 1575 aa17.62■□□□□ 0.41
RAB5C-208ENST00000551338 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
RAB5C-208ENST00000551338 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
RAB5C-208ENST00000551338 SNAPC4Q5SXM2 1469 aa17.59■□□□□ 0.41
RAB5C-208ENST00000551338 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
RAB5C-208ENST00000551338 RRBP1Q9P2E9 1410 aaKnown RBP17.56■□□□□ 0.4
RAB5C-208ENST00000551338 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
RAB5C-208ENST00000551338 P3H3Q8IVL6 736 aa17.55■□□□□ 0.4
RAB5C-208ENST00000551338 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
RAB5C-208ENST00000551338 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-208ENST00000551338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-208ENST00000551338 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.4
RAB5C-208ENST00000551338 GRIN2AQ12879 1464 aa17.52■□□□□ 0.4
RAB5C-208ENST00000551338 KIAA0556O60303 1618 aa17.47■□□□□ 0.39
RAB5C-208ENST00000551338 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
RAB5C-208ENST00000551338 SYNJ2O15056 1496 aa17.46■□□□□ 0.39
RAB5C-208ENST00000551338 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
RAB5C-208ENST00000551338 CCER1Q8TC90 406 aaPredicted RBP17.46■□□□□ 0.39
RAB5C-208ENST00000551338 HECW1Q76N89 1606 aa17.46■□□□□ 0.39
RAB5C-208ENST00000551338 KIAA0586Q9BVV6 1533 aa17.46■□□□□ 0.39
RAB5C-208ENST00000551338 CCNB3Q8WWL7 1395 aa17.43■□□□□ 0.38
RAB5C-208ENST00000551338 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
RAB5C-208ENST00000551338 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
RAB5C-208ENST00000551338 DISP1Q96F81 1524 aa17.4■□□□□ 0.38
RAB5C-208ENST00000551338 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
RAB5C-208ENST00000551338 NUP160Q12769 1436 aa17.38■□□□□ 0.37
RAB5C-208ENST00000551338 CCDC18Q5T9S5 1454 aa17.37■□□□□ 0.37
RAB5C-208ENST00000551338 CHD1O14646 1710 aa17.37■□□□□ 0.37
RAB5C-208ENST00000551338 MAGI3Q5TCQ9 1506 aa17.36■□□□□ 0.37
RAB5C-208ENST00000551338 ATP1B4Q9UN42 357 aaPredicted RBP17.35■□□□□ 0.37
RAB5C-208ENST00000551338 RAPGEF6Q8TEU7 1601 aa17.34■□□□□ 0.37
RAB5C-208ENST00000551338 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
RAB5C-208ENST00000551338 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
RAB5C-208ENST00000551338 CDK13Q14004 1512 aaKnown RBP17.3■□□□□ 0.36
RAB5C-208ENST00000551338 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
RAB5C-208ENST00000551338 NCOA2Q15596 1464 aa17.29■□□□□ 0.36
RAB5C-208ENST00000551338 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
RAB5C-208ENST00000551338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.35
RAB5C-208ENST00000551338 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
RAB5C-208ENST00000551338 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
RAB5C-208ENST00000551338 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
RAB5C-208ENST00000551338 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
RAB5C-208ENST00000551338 PTPN23Q9H3S7 1636 aa17.23■□□□□ 0.35
RAB5C-208ENST00000551338 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
RAB5C-208ENST00000551338 FBLN2P98095 1184 aa17.19■□□□□ 0.34
RAB5C-208ENST00000551338 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
RAB5C-208ENST00000551338 ABCA8O94911 1581 aa17.18■□□□□ 0.34
RAB5C-208ENST00000551338 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
RAB5C-208ENST00000551338 ADCY10Q96PN6 1610 aa17.18■□□□□ 0.34
RAB5C-208ENST00000551338 ITGAEP38570 1179 aa17.17■□□□□ 0.34
RAB5C-208ENST00000551338 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
RAB5C-208ENST00000551338 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
RAB5C-208ENST00000551338 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
RAB5C-208ENST00000551338 PLB1Q6P1J6 1458 aa17.15■□□□□ 0.34
RAB5C-208ENST00000551338 CLSPNQ9HAW4 1339 aa17.15■□□□□ 0.34
RAB5C-208ENST00000551338 GCC2Q8IWJ2 1684 aa17.13■□□□□ 0.33
RAB5C-208ENST00000551338 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
RAB5C-208ENST00000551338 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
RAB5C-208ENST00000551338 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
RAB5C-208ENST00000551338 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
RAB5C-208ENST00000551338 KIF14Q15058 1648 aa17.09■□□□□ 0.33
RAB5C-208ENST00000551338 MIA2Q96PC5 1412 aa17.08■□□□□ 0.32
RAB5C-208ENST00000551338 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
RAB5C-208ENST00000551338 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-208ENST00000551338 TROQ12816 1431 aaPredicted RBP17.06■□□□□ 0.32
RAB5C-208ENST00000551338 ARID3CA6NKF2 412 aa17.06■□□□□ 0.32
RAB5C-208ENST00000551338 DNMT1P26358 1616 aaKnown RBP17.05■□□□□ 0.32
RAB5C-208ENST00000551338 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
RAB5C-208ENST00000551338 CDC42BPAQ5VT25 1732 aa17.04■□□□□ 0.32
RAB5C-208ENST00000551338 ERCC6L2Q5T890 1561 aa17.02■□□□□ 0.32
RAB5C-208ENST00000551338 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
RAB5C-208ENST00000551338 NAIPQ13075 1403 aa17■□□□□ 0.31
RAB5C-208ENST00000551338 AKNAQ7Z591 1439 aa17■□□□□ 0.31
RAB5C-208ENST00000551338 ATP10BO94823 1461 aa16.99■□□□□ 0.31
RAB5C-208ENST00000551338 ADGBQ8N7X0 1667 aa16.99■□□□□ 0.31
RAB5C-208ENST00000551338 CDK11AQ9UQ88 783 aaPredicted RBP16.97■□□□□ 0.31
RAB5C-208ENST00000551338 KDM6BO15054 1643 aa16.96■□□□□ 0.31
RAB5C-208ENST00000551338 PTPRGP23470 1445 aa16.96■□□□□ 0.3
RAB5C-208ENST00000551338 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
RAB5C-208ENST00000551338 GPATCH8Q9UKJ3 1502 aaKnown RBP16.95■□□□□ 0.3
RAB5C-208ENST00000551338 CAMSAP2Q08AD1 1489 aa16.94■□□□□ 0.3
RAB5C-208ENST00000551338 DAPK1P53355 1430 aa16.94■□□□□ 0.3
RAB5C-208ENST00000551338 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
RAB5C-208ENST00000551338 UACAQ9BZF9 1416 aa16.92■□□□□ 0.3
RAB5C-208ENST00000551338 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
RAB5C-208ENST00000551338 PREX2Q70Z35 1606 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms