RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
PRPF40B-213ENST00000551269 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
PRPF40B-213ENST00000551269 KIAA0586Q9BVV6 1533 aa19.15■□□□□ 0.66
PRPF40B-213ENST00000551269 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
PRPF40B-213ENST00000551269 UBTFP17480 764 aaKnown RBP19.08■□□□□ 0.64
PRPF40B-213ENST00000551269 UGGT2Q9NYU1 1516 aa19.05■□□□□ 0.64
PRPF40B-213ENST00000551269 KIAA0556O60303 1618 aa19.04■□□□□ 0.64
PRPF40B-213ENST00000551269 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
PRPF40B-213ENST00000551269 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
PRPF40B-213ENST00000551269 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
PRPF40B-213ENST00000551269 SAMD9Q5K651 1589 aa19.02■□□□□ 0.64
PRPF40B-213ENST00000551269 EFCAB5A4FU69 1503 aa19.02■□□□□ 0.64
PRPF40B-213ENST00000551269 ARHGEF11O15085 1522 aa19■□□□□ 0.63
PRPF40B-213ENST00000551269 TNIKQ9UKE5 1360 aa18.99■□□□□ 0.63
PRPF40B-213ENST00000551269 ERCC6L2Q5T890 1561 aa18.98■□□□□ 0.63
PRPF40B-213ENST00000551269 CARMIL2Q6F5E8 1435 aa18.98■□□□□ 0.63
PRPF40B-213ENST00000551269 PRG4Q92954 1404 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-213ENST00000551269 JPH4Q96JJ6 628 aa18.96■□□□□ 0.63
PRPF40B-213ENST00000551269 DISP1Q96F81 1524 aa18.95■□□□□ 0.62
PRPF40B-213ENST00000551269 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-213ENST00000551269 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
PRPF40B-213ENST00000551269 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
PRPF40B-213ENST00000551269 CLIP1P30622 1438 aa18.89■□□□□ 0.61
PRPF40B-213ENST00000551269 ARHGAP35Q9NRY4 1499 aa18.87■□□□□ 0.61
PRPF40B-213ENST00000551269 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
PRPF40B-213ENST00000551269 FHOD3Q2V2M9 1422 aa18.84■□□□□ 0.61
PRPF40B-213ENST00000551269 DNAJC5Q9H3Z4 198 aa18.83■□□□□ 0.6
PRPF40B-213ENST00000551269 RAPGEF6Q8TEU7 1601 aa18.8■□□□□ 0.6
PRPF40B-213ENST00000551269 P3H3Q8IVL6 736 aa18.79■□□□□ 0.6
PRPF40B-213ENST00000551269 PTPRGP23470 1445 aa18.78■□□□□ 0.6
PRPF40B-213ENST00000551269 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.6
PRPF40B-213ENST00000551269 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
PRPF40B-213ENST00000551269 HECW1Q76N89 1606 aa18.76■□□□□ 0.59
PRPF40B-213ENST00000551269 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
PRPF40B-213ENST00000551269 ADCY10Q96PN6 1610 aa18.75■□□□□ 0.59
PRPF40B-213ENST00000551269 ABCA8O94911 1581 aa18.75■□□□□ 0.59
PRPF40B-213ENST00000551269 ABCC2Q92887 1545 aa18.74■□□□□ 0.59
PRPF40B-213ENST00000551269 LRRIQ1Q96JM4 1722 aa18.7■□□□□ 0.58
PRPF40B-213ENST00000551269 PLB1Q6P1J6 1458 aa18.7■□□□□ 0.58
PRPF40B-213ENST00000551269 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
PRPF40B-213ENST00000551269 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-213ENST00000551269 UHRF1BP1LA0JNW5 1464 aa18.67■□□□□ 0.58
PRPF40B-213ENST00000551269 FYCO1Q9BQS8 1478 aa18.67■□□□□ 0.58
PRPF40B-213ENST00000551269 CYB5RLQ6IPT4 315 aa18.66■□□□□ 0.58
PRPF40B-213ENST00000551269 VPS8Q8N3P4 1428 aa18.66■□□□□ 0.58
PRPF40B-213ENST00000551269 CFAP43Q8NDM7 1665 aa18.64■□□□□ 0.57
PRPF40B-213ENST00000551269 CASKIN1Q8WXD9 1431 aa18.62■□□□□ 0.57
PRPF40B-213ENST00000551269 NUP153P49790 1475 aaKnown RBP18.6■□□□□ 0.57
PRPF40B-213ENST00000551269 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
PRPF40B-213ENST00000551269 KDM5BQ9UGL1 1544 aa18.58■□□□□ 0.56
PRPF40B-213ENST00000551269 CDK13Q14004 1512 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-213ENST00000551269 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-213ENST00000551269 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-213ENST00000551269 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
PRPF40B-213ENST00000551269 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
PRPF40B-213ENST00000551269 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
PRPF40B-213ENST00000551269 ARID3CA6NKF2 412 aa18.5■□□□□ 0.55
PRPF40B-213ENST00000551269 ATP10BO94823 1461 aa18.5■□□□□ 0.55
PRPF40B-213ENST00000551269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
PRPF40B-213ENST00000551269 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-213ENST00000551269 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
PRPF40B-213ENST00000551269 KIF14Q15058 1648 aa18.46■□□□□ 0.55
PRPF40B-213ENST00000551269 EHBP1L1Q8N3D4 1523 aa18.46■□□□□ 0.55
PRPF40B-213ENST00000551269 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.54
PRPF40B-213ENST00000551269 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
PRPF40B-213ENST00000551269 MAP3K1Q13233 1512 aa18.44■□□□□ 0.54
PRPF40B-213ENST00000551269 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
PRPF40B-213ENST00000551269 DIP2BQ9P265 1576 aa18.43■□□□□ 0.54
PRPF40B-213ENST00000551269 APLP2Q06481 763 aa18.42■□□□□ 0.54
PRPF40B-213ENST00000551269 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-213ENST00000551269 MYO5CQ9NQX4 1742 aa18.4■□□□□ 0.54
PRPF40B-213ENST00000551269 MAGI3Q5TCQ9 1506 aa18.39■□□□□ 0.54
PRPF40B-213ENST00000551269 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
PRPF40B-213ENST00000551269 TROQ12816 1431 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-213ENST00000551269 TSPOAP1O95153 1857 aa18.37■□□□□ 0.53
PRPF40B-213ENST00000551269 ITSN2Q9NZM3 1697 aa18.37■□□□□ 0.53
PRPF40B-213ENST00000551269 ABCA9Q8IUA7 1624 aa18.36■□□□□ 0.53
PRPF40B-213ENST00000551269 MAP3K4Q9Y6R4 1608 aa18.35■□□□□ 0.53
PRPF40B-213ENST00000551269 GLI2P10070 1586 aa18.35■□□□□ 0.53
PRPF40B-213ENST00000551269 TTC37Q6PGP7 1564 aa18.35■□□□□ 0.53
PRPF40B-213ENST00000551269 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
PRPF40B-213ENST00000551269 PLEKHD1A6NEE1 506 aa18.35■□□□□ 0.53
PRPF40B-213ENST00000551269 ABCC10Q5T3U5 1492 aa18.34■□□□□ 0.53
PRPF40B-213ENST00000551269 CDC42BPAQ5VT25 1732 aa18.33■□□□□ 0.52
PRPF40B-213ENST00000551269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.31■□□□□ 0.52
PRPF40B-213ENST00000551269 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
PRPF40B-213ENST00000551269 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
PRPF40B-213ENST00000551269 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.52
PRPF40B-213ENST00000551269 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
PRPF40B-213ENST00000551269 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-213ENST00000551269 NCOA2Q15596 1464 aa18.25■□□□□ 0.51
PRPF40B-213ENST00000551269 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
PRPF40B-213ENST00000551269 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
PRPF40B-213ENST00000551269 ARHGAP5Q13017 1502 aa18.21■□□□□ 0.51
PRPF40B-213ENST00000551269 ARAP3Q8WWN8 1544 aa18.2■□□□□ 0.5
PRPF40B-213ENST00000551269 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
PRPF40B-213ENST00000551269 TEX14Q8IWB6 1497 aa18.2■□□□□ 0.5
PRPF40B-213ENST00000551269 CD109Q6YHK3 1445 aa18.19■□□□□ 0.5
PRPF40B-213ENST00000551269 CCNB3Q8WWL7 1395 aa18.18■□□□□ 0.5
PRPF40B-213ENST00000551269 FANCAO15360 1455 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms