RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
NPAS3-209ENST00000551008 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.21
NPAS3-209ENST00000551008 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
NPAS3-209ENST00000551008 KIAA0586Q9BVV6 1533 aa22.55■■□□□ 1.2
NPAS3-209ENST00000551008 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
NPAS3-209ENST00000551008 TRHP20396 242 aaPredicted RBP22.45■■□□□ 1.18
NPAS3-209ENST00000551008 IQGAP2Q13576 1575 aa22.42■■□□□ 1.18
NPAS3-209ENST00000551008 ADCY10Q96PN6 1610 aa22.4■■□□□ 1.18
NPAS3-209ENST00000551008 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
NPAS3-209ENST00000551008 KIF13AQ9H1H9 1805 aa22.37■■□□□ 1.17
NPAS3-209ENST00000551008 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
NPAS3-209ENST00000551008 DISP1Q96F81 1524 aa22.32■■□□□ 1.16
NPAS3-209ENST00000551008 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
NPAS3-209ENST00000551008 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
NPAS3-209ENST00000551008 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
NPAS3-209ENST00000551008 KIAA0556O60303 1618 aa22.24■■□□□ 1.15
NPAS3-209ENST00000551008 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
NPAS3-209ENST00000551008 PTPRGP23470 1445 aa22.23■■□□□ 1.15
NPAS3-209ENST00000551008 CARMIL2Q6F5E8 1435 aa22.23■■□□□ 1.15
NPAS3-209ENST00000551008 DIP2BQ9P265 1576 aa22.21■■□□□ 1.15
NPAS3-209ENST00000551008 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
NPAS3-209ENST00000551008 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
NPAS3-209ENST00000551008 ABCC2Q92887 1545 aa22.14■■□□□ 1.13
NPAS3-209ENST00000551008 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
NPAS3-209ENST00000551008 UACAQ9BZF9 1416 aa22.1■■□□□ 1.13
NPAS3-209ENST00000551008 NPM1P06748 294 aaKnown RBP eCLIP22.07■■□□□ 1.12
NPAS3-209ENST00000551008 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
NPAS3-209ENST00000551008 EEA1Q15075 1411 aa22.06■■□□□ 1.12
NPAS3-209ENST00000551008 KDM5BQ9UGL1 1544 aa22.06■■□□□ 1.12
NPAS3-209ENST00000551008 ZCCHC11Q5TAX3 1644 aaKnown RBP22.06■■□□□ 1.12
NPAS3-209ENST00000551008 FAM69CQ0P6D2 419 aa22.04■■□□□ 1.12
NPAS3-209ENST00000551008 ABCA8O94911 1581 aa22.04■■□□□ 1.12
NPAS3-209ENST00000551008 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
NPAS3-209ENST00000551008 TSPOAP1O95153 1857 aa22.03■■□□□ 1.12
NPAS3-209ENST00000551008 PLB1Q6P1J6 1458 aa22.03■■□□□ 1.12
NPAS3-209ENST00000551008 ASXL2Q76L83 1435 aa22.02■■□□□ 1.12
NPAS3-209ENST00000551008 SAMD9Q5K651 1589 aa22.01■■□□□ 1.11
NPAS3-209ENST00000551008 PPRC1Q5VV67 1664 aaKnown RBP22.01■■□□□ 1.11
NPAS3-209ENST00000551008 KIF21BO75037 1637 aa21.98■■□□□ 1.11
NPAS3-209ENST00000551008 GLI2P10070 1586 aa21.98■■□□□ 1.11
NPAS3-209ENST00000551008 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
NPAS3-209ENST00000551008 EPRSP07814 1512 aaKnown RBP21.92■■□□□ 1.1
NPAS3-209ENST00000551008 MAP3K4Q9Y6R4 1608 aa21.91■■□□□ 1.1
NPAS3-209ENST00000551008 KDM6BO15054 1643 aa21.88■■□□□ 1.09
NPAS3-209ENST00000551008 WDR7Q9Y4E6 1490 aa21.86■■□□□ 1.09
NPAS3-209ENST00000551008 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
NPAS3-209ENST00000551008 RAPGEF6Q8TEU7 1601 aa21.83■■□□□ 1.08
NPAS3-209ENST00000551008 ATP10BO94823 1461 aa21.8■■□□□ 1.08
NPAS3-209ENST00000551008 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
NPAS3-209ENST00000551008 EFCAB5A4FU69 1503 aa21.77■■□□□ 1.08
NPAS3-209ENST00000551008 CFAP43Q8NDM7 1665 aa21.76■■□□□ 1.07
NPAS3-209ENST00000551008 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
NPAS3-209ENST00000551008 NUP153P49790 1475 aaKnown RBP21.75■■□□□ 1.07
NPAS3-209ENST00000551008 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
NPAS3-209ENST00000551008 ARID3CA6NKF2 412 aa21.71■■□□□ 1.07
NPAS3-209ENST00000551008 RANGAP1P46060 587 aaPredicted RBP21.71■■□□□ 1.07
NPAS3-209ENST00000551008 TEX14Q8IWB6 1497 aa21.68■■□□□ 1.06
NPAS3-209ENST00000551008 MAGI3Q5TCQ9 1506 aa21.68■■□□□ 1.06
NPAS3-209ENST00000551008 ABCA9Q8IUA7 1624 aa21.67■■□□□ 1.06
NPAS3-209ENST00000551008 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
NPAS3-209ENST00000551008 ARHGAP35Q9NRY4 1499 aa21.66■■□□□ 1.06
NPAS3-209ENST00000551008 CD109Q6YHK3 1445 aa21.65■■□□□ 1.06
NPAS3-209ENST00000551008 KCNH8Q96L42 1107 aa21.64■■□□□ 1.05
NPAS3-209ENST00000551008 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
NPAS3-209ENST00000551008 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
NPAS3-209ENST00000551008 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.04
NPAS3-209ENST00000551008 LRRIQ1Q96JM4 1722 aa21.58■■□□□ 1.04
NPAS3-209ENST00000551008 HECW1Q76N89 1606 aa21.51■■□□□ 1.03
NPAS3-209ENST00000551008 KDM4FA0A1W2PPD8 638 aa21.51■■□□□ 1.03
NPAS3-209ENST00000551008 TTC37Q6PGP7 1564 aa21.51■■□□□ 1.03
NPAS3-209ENST00000551008 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
NPAS3-209ENST00000551008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.5■■□□□ 1.03
NPAS3-209ENST00000551008 FMN1Q68DA7 1419 aa21.49■■□□□ 1.03
NPAS3-209ENST00000551008 FRMPD1Q5SYB0 1578 aa21.47■■□□□ 1.03
NPAS3-209ENST00000551008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.46■■□□□ 1.03
NPAS3-209ENST00000551008 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
NPAS3-209ENST00000551008 PCF11O94913 1555 aaKnown RBP21.45■■□□□ 1.02
NPAS3-209ENST00000551008 NEO1Q92859 1461 aa21.44■■□□□ 1.02
NPAS3-209ENST00000551008 ADGRL1O94910 1474 aa21.42■■□□□ 1.02
NPAS3-209ENST00000551008 KIF14Q15058 1648 aa21.41■■□□□ 1.02
NPAS3-209ENST00000551008 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
NPAS3-209ENST00000551008 RICTORQ6R327 1708 aa21.4■■□□□ 1.02
NPAS3-209ENST00000551008 PHLDB1Q86UU1 1377 aa21.38■■□□□ 1.01
NPAS3-209ENST00000551008 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
NPAS3-209ENST00000551008 CASKIN1Q8WXD9 1431 aa21.36■■□□□ 1.01
NPAS3-209ENST00000551008 MYO5CQ9NQX4 1742 aa21.35■■□□□ 1.01
NPAS3-209ENST00000551008 FANCAO15360 1455 aa21.34■■□□□ 1.01
NPAS3-209ENST00000551008 CLIP1P30622 1438 aa21.34■■□□□ 1.01
NPAS3-209ENST00000551008 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
NPAS3-209ENST00000551008 RAPGEF3O95398 923 aa21.32■■□□□ 1
NPAS3-209ENST00000551008 AKNAQ7Z591 1439 aa21.31■■□□□ 1
NPAS3-209ENST00000551008 ATP1B4Q9UN42 357 aaPredicted RBP21.31■■□□□ 1
NPAS3-209ENST00000551008 FYCO1Q9BQS8 1478 aa21.3■■□□□ 1
NPAS3-209ENST00000551008 PLCH2O75038 1416 aa21.29■■□□□ 1
NPAS3-209ENST00000551008 ARHGEF40Q8TER5 1519 aa21.28■■□□□ 1
NPAS3-209ENST00000551008 CCDC18Q5T9S5 1454 aa21.27■■□□□ 1
NPAS3-209ENST00000551008 ZMYM4Q5VZL5 1548 aa21.27■■□□□ 1
NPAS3-209ENST00000551008 CDC42BPBQ9Y5S2 1711 aa21.26■□□□□ 0.99
NPAS3-209ENST00000551008 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
NPAS3-209ENST00000551008 SIGLEC1Q9BZZ2 1709 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms