RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
CR383656.13-201ENST00000550928 CUL7Q14999 1698 aa22.97■■□□□ 1.27
CR383656.13-201ENST00000550928 PRG4Q92954 1404 aaPredicted RBP22.92■■□□□ 1.26
CR383656.13-201ENST00000550928 RUSC2Q8N2Y8 1516 aa22.89■■□□□ 1.26
CR383656.13-201ENST00000550928 KIAA0586Q9BVV6 1533 aa22.89■■□□□ 1.26
CR383656.13-201ENST00000550928 TRHP20396 242 aaPredicted RBP22.89■■□□□ 1.25
CR383656.13-201ENST00000550928 RAPGEF2Q9Y4G8 1499 aa22.78■■□□□ 1.24
CR383656.13-201ENST00000550928 IQGAP2Q13576 1575 aa22.67■■□□□ 1.22
CR383656.13-201ENST00000550928 CARMIL2Q6F5E8 1435 aa22.65■■□□□ 1.22
CR383656.13-201ENST00000550928 NPM1P06748 294 aaKnown RBP eCLIP22.64■■□□□ 1.21
CR383656.13-201ENST00000550928 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.21
CR383656.13-201ENST00000550928 PTPRGP23470 1445 aa22.64■■□□□ 1.21
CR383656.13-201ENST00000550928 PRXQ9BXM0 1461 aa22.63■■□□□ 1.21
CR383656.13-201ENST00000550928 TNIKQ9UKE5 1360 aa22.62■■□□□ 1.21
CR383656.13-201ENST00000550928 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
CR383656.13-201ENST00000550928 DISP1Q96F81 1524 aa22.57■■□□□ 1.2
CR383656.13-201ENST00000550928 UGGT2Q9NYU1 1516 aa22.57■■□□□ 1.2
CR383656.13-201ENST00000550928 ADCY10Q96PN6 1610 aa22.54■■□□□ 1.2
CR383656.13-201ENST00000550928 EEA1Q15075 1411 aa22.52■■□□□ 1.2
CR383656.13-201ENST00000550928 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
CR383656.13-201ENST00000550928 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
CR383656.13-201ENST00000550928 MAPKBP1O60336 1514 aa22.46■■□□□ 1.19
CR383656.13-201ENST00000550928 FAM69CQ0P6D2 419 aa22.45■■□□□ 1.18
CR383656.13-201ENST00000550928 UACAQ9BZF9 1416 aa22.45■■□□□ 1.18
CR383656.13-201ENST00000550928 KIAA0556O60303 1618 aa22.45■■□□□ 1.18
CR383656.13-201ENST00000550928 UHRF1BP1LA0JNW5 1464 aa22.43■■□□□ 1.18
CR383656.13-201ENST00000550928 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
CR383656.13-201ENST00000550928 ABCC10Q5T3U5 1492 aa22.42■■□□□ 1.18
CR383656.13-201ENST00000550928 KIF13AQ9H1H9 1805 aa22.42■■□□□ 1.18
CR383656.13-201ENST00000550928 ABCC2Q92887 1545 aa22.41■■□□□ 1.18
CR383656.13-201ENST00000550928 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
CR383656.13-201ENST00000550928 DIP2BQ9P265 1576 aa22.33■■□□□ 1.16
CR383656.13-201ENST00000550928 ASXL2Q76L83 1435 aa22.31■■□□□ 1.16
CR383656.13-201ENST00000550928 KDM5BQ9UGL1 1544 aa22.31■■□□□ 1.16
CR383656.13-201ENST00000550928 PLB1Q6P1J6 1458 aa22.31■■□□□ 1.16
CR383656.13-201ENST00000550928 KIF21BO75037 1637 aa22.27■■□□□ 1.16
CR383656.13-201ENST00000550928 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
CR383656.13-201ENST00000550928 ABCA8O94911 1581 aa22.25■■□□□ 1.15
CR383656.13-201ENST00000550928 ZCCHC11Q5TAX3 1644 aaKnown RBP22.23■■□□□ 1.15
CR383656.13-201ENST00000550928 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
CR383656.13-201ENST00000550928 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
CR383656.13-201ENST00000550928 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
CR383656.13-201ENST00000550928 GLI2P10070 1586 aa22.2■■□□□ 1.14
CR383656.13-201ENST00000550928 TSPOAP1O95153 1857 aa22.18■■□□□ 1.14
CR383656.13-201ENST00000550928 EPRSP07814 1512 aaKnown RBP22.17■■□□□ 1.14
CR383656.13-201ENST00000550928 KCNH8Q96L42 1107 aa22.14■■□□□ 1.13
CR383656.13-201ENST00000550928 WDR7Q9Y4E6 1490 aa22.13■■□□□ 1.13
CR383656.13-201ENST00000550928 ATP10BO94823 1461 aa22.12■■□□□ 1.13
CR383656.13-201ENST00000550928 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
CR383656.13-201ENST00000550928 FHOD3Q2V2M9 1422 aa22.1■■□□□ 1.13
CR383656.13-201ENST00000550928 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
CR383656.13-201ENST00000550928 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
CR383656.13-201ENST00000550928 RAPGEF6Q8TEU7 1601 aa22.06■■□□□ 1.12
CR383656.13-201ENST00000550928 PPRC1Q5VV67 1664 aaKnown RBP22.06■■□□□ 1.12
CR383656.13-201ENST00000550928 MAP3K4Q9Y6R4 1608 aa22.06■■□□□ 1.12
CR383656.13-201ENST00000550928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.04■■□□□ 1.12
CR383656.13-201ENST00000550928 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
CR383656.13-201ENST00000550928 KDM6BO15054 1643 aa22.04■■□□□ 1.12
CR383656.13-201ENST00000550928 CD109Q6YHK3 1445 aa22.01■■□□□ 1.11
CR383656.13-201ENST00000550928 NUP153P49790 1475 aaKnown RBP22■■□□□ 1.11
CR383656.13-201ENST00000550928 TEX14Q8IWB6 1497 aa21.99■■□□□ 1.11
CR383656.13-201ENST00000550928 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
CR383656.13-201ENST00000550928 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
CR383656.13-201ENST00000550928 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
CR383656.13-201ENST00000550928 COL17A1Q9UMD9 1497 aaPredicted RBP21.95■■□□□ 1.1
CR383656.13-201ENST00000550928 MAGI3Q5TCQ9 1506 aa21.95■■□□□ 1.1
CR383656.13-201ENST00000550928 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
CR383656.13-201ENST00000550928 ATP1B4Q9UN42 357 aaPredicted RBP21.9■■□□□ 1.1
CR383656.13-201ENST00000550928 ABCA9Q8IUA7 1624 aa21.87■■□□□ 1.09
CR383656.13-201ENST00000550928 PHLDB1Q86UU1 1377 aa21.81■■□□□ 1.08
CR383656.13-201ENST00000550928 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
CR383656.13-201ENST00000550928 CDK11AQ9UQ88 783 aaPredicted RBP21.79■■□□□ 1.08
CR383656.13-201ENST00000550928 HECW1Q76N89 1606 aa21.78■■□□□ 1.08
CR383656.13-201ENST00000550928 ARAP3Q8WWN8 1544 aa21.77■■□□□ 1.08
CR383656.13-201ENST00000550928 KDM4FA0A1W2PPD8 638 aa21.77■■□□□ 1.08
CR383656.13-201ENST00000550928 CLIP1P30622 1438 aa21.76■■□□□ 1.07
CR383656.13-201ENST00000550928 NEO1Q92859 1461 aa21.74■■□□□ 1.07
CR383656.13-201ENST00000550928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.74■■□□□ 1.07
CR383656.13-201ENST00000550928 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
CR383656.13-201ENST00000550928 RAPGEF3O95398 923 aa21.7■■□□□ 1.06
CR383656.13-201ENST00000550928 LRRIQ1Q96JM4 1722 aa21.66■■□□□ 1.06
CR383656.13-201ENST00000550928 TTC37Q6PGP7 1564 aa21.66■■□□□ 1.06
CR383656.13-201ENST00000550928 TROQ12816 1431 aaPredicted RBP21.66■■□□□ 1.06
CR383656.13-201ENST00000550928 AKNAQ7Z591 1439 aa21.66■■□□□ 1.06
CR383656.13-201ENST00000550928 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
CR383656.13-201ENST00000550928 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
CR383656.13-201ENST00000550928 PLCH2O75038 1416 aa21.65■■□□□ 1.06
CR383656.13-201ENST00000550928 FANCAO15360 1455 aa21.64■■□□□ 1.06
CR383656.13-201ENST00000550928 PCF11O94913 1555 aaKnown RBP21.64■■□□□ 1.05
CR383656.13-201ENST00000550928 CCDC18Q5T9S5 1454 aa21.62■■□□□ 1.05
CR383656.13-201ENST00000550928 FYCO1Q9BQS8 1478 aa21.61■■□□□ 1.05
CR383656.13-201ENST00000550928 EFCAB2Q5VUJ9 269 aa21.61■■□□□ 1.05
CR383656.13-201ENST00000550928 DENND4BO75064 1496 aaPredicted RBP21.6■■□□□ 1.05
CR383656.13-201ENST00000550928 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
CR383656.13-201ENST00000550928 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
CR383656.13-201ENST00000550928 CFAP74Q9C0B2 1584 aa21.58■■□□□ 1.05
CR383656.13-201ENST00000550928 KIF14Q15058 1648 aa21.58■■□□□ 1.04
CR383656.13-201ENST00000550928 SCAPERQ9BY12 1400 aa21.55■■□□□ 1.04
CR383656.13-201ENST00000550928 FRMPD1Q5SYB0 1578 aa21.54■■□□□ 1.04
CR383656.13-201ENST00000550928 MYO5CQ9NQX4 1742 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms