RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
LGR5-206ENST00000550851 CFDP1Q9UEE9 299 aaPredicted RBP16.14■□□□□ 0.17
LGR5-206ENST00000550851 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
LGR5-206ENST00000550851 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
LGR5-206ENST00000550851 CADPSQ9ULU8 1353 aa16.11■□□□□ 0.17
LGR5-206ENST00000550851 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
LGR5-206ENST00000550851 EIF4G1Q04637 1599 aaKnown RBP16.07■□□□□ 0.16
LGR5-206ENST00000550851 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
LGR5-206ENST00000550851 SALL2Q9Y467 1007 aaPredicted RBP16.07■□□□□ 0.16
LGR5-206ENST00000550851 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■■■□ 21.8
LGR5-206ENST00000550851 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
LGR5-206ENST00000550851 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
LGR5-206ENST00000550851 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
LGR5-206ENST00000550851 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
LGR5-206ENST00000550851 CCNB3Q8WWL7 1395 aa16.04■□□□□ 0.16
LGR5-206ENST00000550851 DAXXQ9UER7 740 aaPredicted RBP16.04■□□□□ 0.16
LGR5-206ENST00000550851 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
LGR5-206ENST00000550851 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
LGR5-206ENST00000550851 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
LGR5-206ENST00000550851 SENP3-EIF4A1A0A087X0R7 540 aa15.98■□□□□ 0.15
LGR5-206ENST00000550851 EIF4G2P78344 907 aaKnown RBP eCLIP15.98■□□□□ 0.15
LGR5-206ENST00000550851 BCL11AQ9H165 835 aa15.97■□□□□ 0.15
LGR5-206ENST00000550851 FKBP8Q14318 412 aa15.96■□□□□ 0.15
LGR5-206ENST00000550851 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
LGR5-206ENST00000550851 TMC1Q8TDI8 760 aa15.93■□□□□ 0.14
LGR5-206ENST00000550851 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
LGR5-206ENST00000550851 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
LGR5-206ENST00000550851 FOXD1Q16676 465 aa15.89■□□□□ 0.13
LGR5-206ENST00000550851 FANCD2Q9BXW9 1451 aa15.88■□□□□ 0.13
LGR5-206ENST00000550851 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
LGR5-206ENST00000550851 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
LGR5-206ENST00000550851 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
LGR5-206ENST00000550851 NEFMP07197 916 aa15.83■□□□□ 0.12
LGR5-206ENST00000550851 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
LGR5-206ENST00000550851 ARHGAP35Q9NRY4 1499 aa15.8■□□□□ 0.12
LGR5-206ENST00000550851 RAB3GAP2Q9H2M9 1393 aa15.79■□□□□ 0.12
LGR5-206ENST00000550851 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
LGR5-206ENST00000550851 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
LGR5-206ENST00000550851 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
LGR5-206ENST00000550851 JPH4Q96JJ6 628 aa15.79■□□□□ 0.12
LGR5-206ENST00000550851 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
LGR5-206ENST00000550851 IGF1RP08069 1367 aa15.79■□□□□ 0.12
LGR5-206ENST00000550851 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
LGR5-206ENST00000550851 DCAF11Q8TEB1 546 aa15.75■□□□□ 0.11
LGR5-206ENST00000550851 CARMIL2Q6F5E8 1435 aa15.74■□□□□ 0.11
LGR5-206ENST00000550851 PKD2Q13563 968 aa15.73■□□□□ 0.11
LGR5-206ENST00000550851 ARID4BQ4LE39 1312 aaPredicted RBP15.73■□□□□ 0.11
LGR5-206ENST00000550851 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
LGR5-206ENST00000550851 WDR43Q15061 677 aaKnown RBP eCLIP15.72■□□□□ 0.11
LGR5-206ENST00000550851 PPP1R15AO75807 674 aaPredicted RBP15.71■□□□□ 0.11
LGR5-206ENST00000550851 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
LGR5-206ENST00000550851 HNRNPMP52272 730 aaKnown RBP eCLIP15.69■□□□□ 0.1
LGR5-206ENST00000550851 MPHOSPH9Q99550 1183 aa15.69■□□□□ 0.1
LGR5-206ENST00000550851 NESP48681 1621 aa15.68■□□□□ 0.1
LGR5-206ENST00000550851 GGT6Q6P531 493 aa15.68■□□□□ 0.1
LGR5-206ENST00000550851 NPM2Q86SE8 214 aaKnown RBP15.68■□□□□ 0.1
LGR5-206ENST00000550851 MLECQ14165 292 aa15.67■□□□□ 0.1
LGR5-206ENST00000550851 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
LGR5-206ENST00000550851 RTL5Q5HYW3 569 aaPredicted RBP15.67■□□□□ 0.1
LGR5-206ENST00000550851 CCDC136Q96JN2 1154 aa15.64■□□□□ 0.09
LGR5-206ENST00000550851 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.09
LGR5-206ENST00000550851 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
LGR5-206ENST00000550851 NUP155O75694 1391 aa15.63■□□□□ 0.09
LGR5-206ENST00000550851 HSPA5P11021 654 aaKnown RBP15.63■□□□□ 0.09
LGR5-206ENST00000550851 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
LGR5-206ENST00000550851 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
LGR5-206ENST00000550851 KNSTRNQ9Y448 316 aa15.61■□□□□ 0.09
LGR5-206ENST00000550851 TIMELESSQ9UNS1 1208 aa15.61■□□□□ 0.09
LGR5-206ENST00000550851 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
LGR5-206ENST00000550851 CFTRP13569 1480 aa15.6■□□□□ 0.09
LGR5-206ENST00000550851 CC2D1BQ5T0F9 858 aaKnown RBP15.6■□□□□ 0.09
LGR5-206ENST00000550851 L3MBTL2Q969R5 705 aa15.6■□□□□ 0.09
LGR5-206ENST00000550851 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
LGR5-206ENST00000550851 PPM1GO15355 546 aaPredicted RBP15.58■□□□□ 0.08
LGR5-206ENST00000550851 SAFB2Q14151 953 aaKnown RBP eCLIP15.58■□□□□ 0.08
LGR5-206ENST00000550851 NEUROD2Q15784 382 aa15.57■□□□□ 0.08
LGR5-206ENST00000550851 DHX57Q6P158 1386 aaKnown RBP15.56■□□□□ 0.08
LGR5-206ENST00000550851 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
LGR5-206ENST00000550851 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
LGR5-206ENST00000550851 KIF3BO15066 747 aa15.55■□□□□ 0.08
LGR5-206ENST00000550851 C14orf37Q86TY3 774 aa15.55■□□□□ 0.08
LGR5-206ENST00000550851 ZNF644Q9H582 1327 aaPredicted RBP15.55■□□□□ 0.08
LGR5-206ENST00000550851 ANKRD30AQ9BXX3 1397 aa15.54■□□□□ 0.08
LGR5-206ENST00000550851 MYT1Q01538 1121 aa15.54■□□□□ 0.08
LGR5-206ENST00000550851 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
LGR5-206ENST00000550851 POGKQ9P215 609 aa15.53■□□□□ 0.08
LGR5-206ENST00000550851 CDCA8Q53HL2 280 aa15.53■□□□□ 0.08
LGR5-206ENST00000550851 ANP32AP39687 249 aaKnown RBP15.52■□□□□ 0.07
LGR5-206ENST00000550851 KIF21BO75037 1637 aa15.52■□□□□ 0.07
LGR5-206ENST00000550851 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.07
LGR5-206ENST00000550851 PTPRGP23470 1445 aa15.52■□□□□ 0.07
LGR5-206ENST00000550851 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.07
LGR5-206ENST00000550851 ARAP1Q96P48 1450 aa15.5■□□□□ 0.07
LGR5-206ENST00000550851 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
LGR5-206ENST00000550851 KANK1Q14678 1352 aa15.49■□□□□ 0.07
LGR5-206ENST00000550851 STK26Q9P289 416 aa15.48■□□□□ 0.07
LGR5-206ENST00000550851 TMF1P82094 1093 aa15.48■□□□□ 0.07
LGR5-206ENST00000550851 CUX1P39880 1505 aa15.47■□□□□ 0.07
LGR5-206ENST00000550851 SPAG9O60271 1321 aaKnown RBP15.47■□□□□ 0.07
LGR5-206ENST00000550851 CYB5RLQ6IPT4 315 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms