RNA–Protein interactions for RNA: ENST00000550844.2

ATXN2-221, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-221ENST00000550844 KIF21BO75037 1637 aa14.35□□□□□ -0.11
ATXN2-221ENST00000550844 JPH4Q96JJ6 628 aa14.32□□□□□ -0.12
ATXN2-221ENST00000550844 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
ATXN2-221ENST00000550844 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
ATXN2-221ENST00000550844 ADAMTS12P58397 1594 aa14.29□□□□□ -0.12
ATXN2-221ENST00000550844 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
ATXN2-221ENST00000550844 HRCP23327 699 aa14.29□□□□□ -0.12
ATXN2-221ENST00000550844 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.12
ATXN2-221ENST00000550844 CUL7Q14999 1698 aa14.26□□□□□ -0.13
ATXN2-221ENST00000550844 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
ATXN2-221ENST00000550844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
ATXN2-221ENST00000550844 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
ATXN2-221ENST00000550844 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
ATXN2-221ENST00000550844 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
ATXN2-221ENST00000550844 APLP2Q06481 763 aa14.22□□□□□ -0.13
ATXN2-221ENST00000550844 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
ATXN2-221ENST00000550844 CHD1O14646 1710 aa14.2□□□□□ -0.14
ATXN2-221ENST00000550844 PCGF6Q9BYE7 350 aa14.19□□□□□ -0.14
ATXN2-221ENST00000550844 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
ATXN2-221ENST00000550844 KIAA0586Q9BVV6 1533 aa14.16□□□□□ -0.14
ATXN2-221ENST00000550844 PRG4Q92954 1404 aaPredicted RBP14.16□□□□□ -0.14
ATXN2-221ENST00000550844 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
ATXN2-221ENST00000550844 NUP160Q12769 1436 aa14.14□□□□□ -0.15
ATXN2-221ENST00000550844 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
ATXN2-221ENST00000550844 VPS8Q8N3P4 1428 aa14.11□□□□□ -0.15
ATXN2-221ENST00000550844 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
ATXN2-221ENST00000550844 CTTNBP2Q8WZ74 1663 aa14.11□□□□□ -0.15
ATXN2-221ENST00000550844 DISP1Q96F81 1524 aa14.08□□□□□ -0.15
ATXN2-221ENST00000550844 ITGAEP38570 1179 aa14.07□□□□□ -0.16
ATXN2-221ENST00000550844 PLB1Q6P1J6 1458 aa14.06□□□□□ -0.16
ATXN2-221ENST00000550844 PTPRGP23470 1445 aa14.05□□□□□ -0.16
ATXN2-221ENST00000550844 CARMIL2Q6F5E8 1435 aa14.05□□□□□ -0.16
ATXN2-221ENST00000550844 KCNH8Q96L42 1107 aa14.04□□□□□ -0.16
ATXN2-221ENST00000550844 UGGT2Q9NYU1 1516 aa14□□□□□ -0.17
ATXN2-221ENST00000550844 FMN1Q68DA7 1419 aa13.99□□□□□ -0.17
ATXN2-221ENST00000550844 PCF11O94913 1555 aaKnown RBP13.98□□□□□ -0.17
ATXN2-221ENST00000550844 KIAA0556O60303 1618 aa13.98□□□□□ -0.17
ATXN2-221ENST00000550844 CDK13Q14004 1512 aaKnown RBP13.98□□□□□ -0.17
ATXN2-221ENST00000550844 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
ATXN2-221ENST00000550844 SAMD9Q5K651 1589 aa13.96□□□□□ -0.17
ATXN2-221ENST00000550844 EFCAB5A4FU69 1503 aa13.96□□□□□ -0.18
ATXN2-221ENST00000550844 MTUS2Q5JR59 1369 aa13.95□□□□□ -0.18
ATXN2-221ENST00000550844 TRIM26Q12899 539 aaPredicted RBP13.95□□□□□ -0.18
ATXN2-221ENST00000550844 CLASP1Q7Z460 1538 aa13.94□□□□□ -0.18
ATXN2-221ENST00000550844 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
ATXN2-221ENST00000550844 CASKIN1Q8WXD9 1431 aa13.93□□□□□ -0.18
ATXN2-221ENST00000550844 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
ATXN2-221ENST00000550844 PLEKHD1A6NEE1 506 aa13.9□□□□□ -0.18
ATXN2-221ENST00000550844 NUP153P49790 1475 aaKnown RBP13.9□□□□□ -0.18
ATXN2-221ENST00000550844 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
ATXN2-221ENST00000550844 UACAQ9BZF9 1416 aa13.87□□□□□ -0.19
ATXN2-221ENST00000550844 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
ATXN2-221ENST00000550844 ARHGEF11O15085 1522 aa13.86□□□□□ -0.19
ATXN2-221ENST00000550844 ZNF644Q9H582 1327 aaPredicted RBP13.86□□□□□ -0.19
ATXN2-221ENST00000550844 PHLDB1Q86UU1 1377 aa13.86□□□□□ -0.19
ATXN2-221ENST00000550844 FYCO1Q9BQS8 1478 aa13.86□□□□□ -0.19
ATXN2-221ENST00000550844 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
ATXN2-221ENST00000550844 ATP10BO94823 1461 aa13.85□□□□□ -0.19
ATXN2-221ENST00000550844 LRRC9Q6ZRR7 1453 aa13.85□□□□□ -0.19
ATXN2-221ENST00000550844 MAGI3Q5TCQ9 1506 aa13.84□□□□□ -0.19
ATXN2-221ENST00000550844 CHIC2Q9UKJ5 165 aa13.84□□□□□ -0.19
ATXN2-221ENST00000550844 LRRIQ1Q96JM4 1722 aa13.84□□□□□ -0.19
ATXN2-221ENST00000550844 SHROOM2Q13796 1616 aa13.84□□□□□ -0.19
ATXN2-221ENST00000550844 TIAM1Q13009 1591 aa13.83□□□□□ -0.2
ATXN2-221ENST00000550844 RAPGEF6Q8TEU7 1601 aa13.83□□□□□ -0.2
ATXN2-221ENST00000550844 HECW1Q76N89 1606 aa13.77□□□□□ -0.2
ATXN2-221ENST00000550844 CFDP1Q9UEE9 299 aaPredicted RBP13.77□□□□□ -0.21
ATXN2-221ENST00000550844 ABCA8O94911 1581 aa13.77□□□□□ -0.21
ATXN2-221ENST00000550844 RIMBP3CA6NJZ7 1639 aa13.77□□□□□ -0.21
ATXN2-221ENST00000550844 RIMBP3BA6NNM3 1639 aa13.77□□□□□ -0.21
ATXN2-221ENST00000550844 RIMBP3Q9UFD9 1639 aa13.77□□□□□ -0.21
ATXN2-221ENST00000550844 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
ATXN2-221ENST00000550844 CCNB3Q8WWL7 1395 aa13.74□□□□□ -0.21
ATXN2-221ENST00000550844 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.211e-7■■□□□ 12.8
ATXN2-221ENST00000550844 ABCC2Q92887 1545 aa13.73□□□□□ -0.21
ATXN2-221ENST00000550844 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
ATXN2-221ENST00000550844 ADCY10Q96PN6 1610 aa13.72□□□□□ -0.21
ATXN2-221ENST00000550844 RRP7BPQ9NSQ0 103 aa13.72□□□□□ -0.21
ATXN2-221ENST00000550844 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
ATXN2-221ENST00000550844 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
ATXN2-221ENST00000550844 TROQ12816 1431 aaPredicted RBP13.71□□□□□ -0.21
ATXN2-221ENST00000550844 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.21
ATXN2-221ENST00000550844 KIF14Q15058 1648 aa13.7□□□□□ -0.22
ATXN2-221ENST00000550844 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
ATXN2-221ENST00000550844 ASXL2Q76L83 1435 aa13.7□□□□□ -0.22
ATXN2-221ENST00000550844 CFAP43Q8NDM7 1665 aa13.67□□□□□ -0.22
ATXN2-221ENST00000550844 ZCCHC11Q5TAX3 1644 aaKnown RBP13.66□□□□□ -0.22
ATXN2-221ENST00000550844 FGD6Q6ZV73 1430 aa13.65□□□□□ -0.22
ATXN2-221ENST00000550844 KDM5BQ9UGL1 1544 aa13.65□□□□□ -0.22
ATXN2-221ENST00000550844 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
ATXN2-221ENST00000550844 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
ATXN2-221ENST00000550844 MAP3K1Q13233 1512 aa13.64□□□□□ -0.23
ATXN2-221ENST00000550844 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
ATXN2-221ENST00000550844 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
ATXN2-221ENST00000550844 GPATCH8Q9UKJ3 1502 aaKnown RBP13.62□□□□□ -0.23
ATXN2-221ENST00000550844 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
ATXN2-221ENST00000550844 PTPRKQ15262 1439 aa13.61□□□□□ -0.23
ATXN2-221ENST00000550844 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
ATXN2-221ENST00000550844 UHRF1BP1LA0JNW5 1464 aa13.61□□□□□ -0.23
ATXN2-221ENST00000550844 RAPGEF3O95398 923 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms