RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 EEA1Q15075 1411 aa20.03■□□□□ 0.8
TUBA1A-207ENST00000550767 SHROOM2Q13796 1616 aa20.02■□□□□ 0.8
TUBA1A-207ENST00000550767 ERCC6L2Q5T890 1561 aa20■□□□□ 0.79
TUBA1A-207ENST00000550767 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
TUBA1A-207ENST00000550767 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
TUBA1A-207ENST00000550767 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
TUBA1A-207ENST00000550767 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
TUBA1A-207ENST00000550767 KIAA0586Q9BVV6 1533 aa19.92■□□□□ 0.78
TUBA1A-207ENST00000550767 PRG4Q92954 1404 aaPredicted RBP19.91■□□□□ 0.78
TUBA1A-207ENST00000550767 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
TUBA1A-207ENST00000550767 CTTNBP2Q8WZ74 1663 aa19.9■□□□□ 0.78
TUBA1A-207ENST00000550767 IQGAP2Q13576 1575 aa19.86■□□□□ 0.77
TUBA1A-207ENST00000550767 KIF21BO75037 1637 aa19.85■□□□□ 0.77
TUBA1A-207ENST00000550767 UGGT2Q9NYU1 1516 aa19.74■□□□□ 0.75
TUBA1A-207ENST00000550767 GOLGA3Q08378 1498 aa19.72■□□□□ 0.75
TUBA1A-207ENST00000550767 CARMIL2Q6F5E8 1435 aa19.7■□□□□ 0.74
TUBA1A-207ENST00000550767 NPM1P06748 294 aaKnown RBP eCLIP19.68■□□□□ 0.74
TUBA1A-207ENST00000550767 KIAA0556O60303 1618 aa19.67■□□□□ 0.74
TUBA1A-207ENST00000550767 DISP1Q96F81 1524 aa19.67■□□□□ 0.74
TUBA1A-207ENST00000550767 ADCY10Q96PN6 1610 aa19.66■□□□□ 0.74
TUBA1A-207ENST00000550767 KIF13AQ9H1H9 1805 aa19.65■□□□□ 0.74
TUBA1A-207ENST00000550767 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
TUBA1A-207ENST00000550767 PTPRGP23470 1445 aa19.63■□□□□ 0.73
TUBA1A-207ENST00000550767 MAPKBP1O60336 1514 aa19.62■□□□□ 0.73
TUBA1A-207ENST00000550767 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
TUBA1A-207ENST00000550767 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
TUBA1A-207ENST00000550767 SAMD9Q5K651 1589 aa19.58■□□□□ 0.73
TUBA1A-207ENST00000550767 ABCC10Q5T3U5 1492 aa19.58■□□□□ 0.73
TUBA1A-207ENST00000550767 FAM69CQ0P6D2 419 aa19.56■□□□□ 0.72
TUBA1A-207ENST00000550767 TTBK1Q5TCY1 1321 aaPredicted RBP19.55■□□□□ 0.72
TUBA1A-207ENST00000550767 EFCAB5A4FU69 1503 aa19.53■□□□□ 0.72
TUBA1A-207ENST00000550767 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
TUBA1A-207ENST00000550767 DIP2BQ9P265 1576 aa19.52■□□□□ 0.72
TUBA1A-207ENST00000550767 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
TUBA1A-207ENST00000550767 ABCC2Q92887 1545 aa19.51■□□□□ 0.71
TUBA1A-207ENST00000550767 UHRF1BP1LA0JNW5 1464 aa19.49■□□□□ 0.71
TUBA1A-207ENST00000550767 UACAQ9BZF9 1416 aa19.48■□□□□ 0.71
TUBA1A-207ENST00000550767 P3H3Q8IVL6 736 aa19.47■□□□□ 0.71
TUBA1A-207ENST00000550767 FHOD3Q2V2M9 1422 aa19.44■□□□□ 0.7
TUBA1A-207ENST00000550767 ABCA8O94911 1581 aa19.43■□□□□ 0.7
TUBA1A-207ENST00000550767 PLB1Q6P1J6 1458 aa19.43■□□□□ 0.7
TUBA1A-207ENST00000550767 ASXL2Q76L83 1435 aa19.41■□□□□ 0.7
TUBA1A-207ENST00000550767 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
TUBA1A-207ENST00000550767 KDM5BQ9UGL1 1544 aa19.4■□□□□ 0.7
TUBA1A-207ENST00000550767 TSPOAP1O95153 1857 aa19.4■□□□□ 0.7
TUBA1A-207ENST00000550767 RAPGEF6Q8TEU7 1601 aa19.38■□□□□ 0.69
TUBA1A-207ENST00000550767 ZCCHC11Q5TAX3 1644 aaKnown RBP19.37■□□□□ 0.69
TUBA1A-207ENST00000550767 GLI2P10070 1586 aa19.36■□□□□ 0.69
TUBA1A-207ENST00000550767 CLIP1P30622 1438 aa19.34■□□□□ 0.69
TUBA1A-207ENST00000550767 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
TUBA1A-207ENST00000550767 FMN1Q68DA7 1419 aa19.32■□□□□ 0.68
TUBA1A-207ENST00000550767 KDM6BO15054 1643 aa19.32■□□□□ 0.68
TUBA1A-207ENST00000550767 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
TUBA1A-207ENST00000550767 EPRSP07814 1512 aaKnown RBP19.3■□□□□ 0.68
TUBA1A-207ENST00000550767 PPRC1Q5VV67 1664 aaKnown RBP19.28■□□□□ 0.68
TUBA1A-207ENST00000550767 NUP153P49790 1475 aaKnown RBP19.27■□□□□ 0.68
TUBA1A-207ENST00000550767 HECW1Q76N89 1606 aa19.26■□□□□ 0.67
TUBA1A-207ENST00000550767 WDR7Q9Y4E6 1490 aa19.25■□□□□ 0.67
TUBA1A-207ENST00000550767 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
TUBA1A-207ENST00000550767 ATP10BO94823 1461 aa19.24■□□□□ 0.67
TUBA1A-207ENST00000550767 PCF11O94913 1555 aaKnown RBP19.22■□□□□ 0.67
TUBA1A-207ENST00000550767 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
TUBA1A-207ENST00000550767 TEX14Q8IWB6 1497 aa19.2■□□□□ 0.66
TUBA1A-207ENST00000550767 LRRIQ1Q96JM4 1722 aa19.18■□□□□ 0.66
TUBA1A-207ENST00000550767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.18■□□□□ 0.66
TUBA1A-207ENST00000550767 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
TUBA1A-207ENST00000550767 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
TUBA1A-207ENST00000550767 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
TUBA1A-207ENST00000550767 FYCO1Q9BQS8 1478 aa19.16■□□□□ 0.66
TUBA1A-207ENST00000550767 CDK13Q14004 1512 aaKnown RBP19.16■□□□□ 0.66
TUBA1A-207ENST00000550767 KCNH8Q96L42 1107 aa19.16■□□□□ 0.66
TUBA1A-207ENST00000550767 CFAP43Q8NDM7 1665 aa19.15■□□□□ 0.66
TUBA1A-207ENST00000550767 COL17A1Q9UMD9 1497 aaPredicted RBP19.12■□□□□ 0.65
TUBA1A-207ENST00000550767 CD109Q6YHK3 1445 aa19.12■□□□□ 0.65
TUBA1A-207ENST00000550767 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
TUBA1A-207ENST00000550767 MAGI3Q5TCQ9 1506 aa19.11■□□□□ 0.65
TUBA1A-207ENST00000550767 KDM4FA0A1W2PPD8 638 aa19.09■□□□□ 0.65
TUBA1A-207ENST00000550767 PLEKHD1A6NEE1 506 aa19.07■□□□□ 0.64
TUBA1A-207ENST00000550767 VPS8Q8N3P4 1428 aa19.06■□□□□ 0.64
TUBA1A-207ENST00000550767 ABCA9Q8IUA7 1624 aa19.05■□□□□ 0.64
TUBA1A-207ENST00000550767 CDK11AQ9UQ88 783 aaPredicted RBP19.04■□□□□ 0.64
TUBA1A-207ENST00000550767 KIF14Q15058 1648 aa19■□□□□ 0.63
TUBA1A-207ENST00000550767 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
TUBA1A-207ENST00000550767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.98■□□□□ 0.63
TUBA1A-207ENST00000550767 TTC37Q6PGP7 1564 aa18.98■□□□□ 0.63
TUBA1A-207ENST00000550767 ARAP3Q8WWN8 1544 aa18.96■□□□□ 0.63
TUBA1A-207ENST00000550767 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
TUBA1A-207ENST00000550767 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
TUBA1A-207ENST00000550767 MYO5CQ9NQX4 1742 aa18.94■□□□□ 0.62
TUBA1A-207ENST00000550767 ADGRL1O94910 1474 aa18.93■□□□□ 0.62
TUBA1A-207ENST00000550767 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
TUBA1A-207ENST00000550767 NEO1Q92859 1461 aa18.92■□□□□ 0.62
TUBA1A-207ENST00000550767 MTUS2Q5JR59 1369 aa18.91■□□□□ 0.62
TUBA1A-207ENST00000550767 CFAP74Q9C0B2 1584 aa18.89■□□□□ 0.62
TUBA1A-207ENST00000550767 MAP3K1Q13233 1512 aa18.88■□□□□ 0.61
TUBA1A-207ENST00000550767 PREX2Q70Z35 1606 aa18.85■□□□□ 0.61
TUBA1A-207ENST00000550767 CDC42BPAQ5VT25 1732 aa18.85■□□□□ 0.61
TUBA1A-207ENST00000550767 PLCH2O75038 1416 aa18.84■□□□□ 0.61
TUBA1A-207ENST00000550767 SUPT6HQ7KZ85 1726 aaKnown RBP18.84■□□□□ 0.61
TUBA1A-207ENST00000550767 FANCAO15360 1455 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms